Protein–RNA interactions for Protein: Q2EG98

Pkd1l3, Polycystic kidney disease protein 1-like 3, mousemouse

Predictions only

Length 2,201 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pkd1l3Q2EG98 Gm266-201ENSMUST00000010673 1215 ntAPPRIS P1 BASIC23.88■■□□□ 1.41
Pkd1l3Q2EG98 1700069B07Rik-202ENSMUST00000191155 939 ntBASIC23.86■■□□□ 1.41
Pkd1l3Q2EG98 Calm3-201ENSMUST00000019514 2290 ntAPPRIS P1 TSL 1 (best) BASIC23.86■■□□□ 1.41
Pkd1l3Q2EG98 Abhd17a-201ENSMUST00000003436 1468 ntAPPRIS P1 TSL 1 (best) BASIC23.85■■□□□ 1.41
Pkd1l3Q2EG98 Ldb1-207ENSMUST00000156585 2014 ntTSL 1 (best) BASIC23.85■■□□□ 1.41
Pkd1l3Q2EG98 Gm16148-201ENSMUST00000119653 893 ntBASIC23.84■■□□□ 1.41
Pkd1l3Q2EG98 Btf3-201ENSMUST00000022163 1091 ntTSL 1 (best) BASIC23.84■■□□□ 1.41
Pkd1l3Q2EG98 Sh3glb2-203ENSMUST00000113620 1694 ntTSL 1 (best) BASIC23.84■■□□□ 1.41
Pkd1l3Q2EG98 Cenpv-201ENSMUST00000018653 1032 ntAPPRIS P1 TSL 1 (best) BASIC23.84■■□□□ 1.41
Pkd1l3Q2EG98 Cgref1-201ENSMUST00000031051 1442 ntAPPRIS P1 TSL 1 (best) BASIC23.84■■□□□ 1.41
Pkd1l3Q2EG98 Casp9-202ENSMUST00000097805 1498 ntTSL 1 (best) BASIC23.82■■□□□ 1.4
Pkd1l3Q2EG98 Coq10a-207ENSMUST00000220227 1434 ntAPPRIS ALT2 TSL 5 BASIC23.82■■□□□ 1.4
Pkd1l3Q2EG98 Gm26566-201ENSMUST00000181601 1038 ntAPPRIS P1 BASIC23.81■■□□□ 1.4
Pkd1l3Q2EG98 Dapk3-209ENSMUST00000219850 1482 ntAPPRIS P1 TSL 1 (best) BASIC23.79■■□□□ 1.4
Pkd1l3Q2EG98 Crlf1-201ENSMUST00000008032 1644 ntAPPRIS P1 TSL 1 (best) BASIC23.78■■□□□ 1.4
Pkd1l3Q2EG98 Gltp-203ENSMUST00000112214 944 ntTSL 3 BASIC23.78■■□□□ 1.4
Pkd1l3Q2EG98 Gm10762-201ENSMUST00000099385 1133 ntAPPRIS P1 BASIC23.77■■□□□ 1.4
Pkd1l3Q2EG98 Emx1-201ENSMUST00000045942 1561 ntAPPRIS P1 TSL 1 (best) BASIC23.76■■□□□ 1.39
Pkd1l3Q2EG98 Kcnmb4os2-201ENSMUST00000080943 1571 ntTSL 5 BASIC23.76■■□□□ 1.39
Pkd1l3Q2EG98 Azin2-201ENSMUST00000030581 2063 ntAPPRIS P1 TSL 1 (best) BASIC23.75■■□□□ 1.39
Pkd1l3Q2EG98 Stk24-201ENSMUST00000079817 2676 ntAPPRIS P1 TSL 1 (best) BASIC23.75■■□□□ 1.39
Pkd1l3Q2EG98 Slc25a28-201ENSMUST00000046038 1514 ntAPPRIS P1 TSL 1 (best) BASIC23.73■■□□□ 1.39
Pkd1l3Q2EG98 Vsig8-202ENSMUST00000177086 1519 ntTSL 1 (best) BASIC23.68■■□□□ 1.38
Pkd1l3Q2EG98 Gm5601-202ENSMUST00000207161 1437 ntTSL 1 (best) BASIC23.68■■□□□ 1.38
Pkd1l3Q2EG98 Rpia-201ENSMUST00000066134 1829 ntAPPRIS P1 TSL 1 (best) BASIC23.65■■□□□ 1.38
Pkd1l3Q2EG98 Tprgl-201ENSMUST00000030896 1724 ntAPPRIS P1 TSL 1 (best) BASIC23.64■■□□□ 1.37
Pkd1l3Q2EG98 Ssbp3-203ENSMUST00000097934 1742 ntAPPRIS ALT2 TSL 5 BASIC23.63■■□□□ 1.37
Pkd1l3Q2EG98 Gtf2a2-203ENSMUST00000119413 1034 ntAPPRIS P1 TSL 1 (best) BASIC23.63■■□□□ 1.37
Pkd1l3Q2EG98 Ccdc122-202ENSMUST00000095625 1195 ntAPPRIS ALT2 TSL 1 (best) BASIC23.63■■□□□ 1.37
Pkd1l3Q2EG98 Eif2ak3-204ENSMUST00000162950 927 ntTSL 1 (best) BASIC23.63■■□□□ 1.37
Pkd1l3Q2EG98 Syt7-201ENSMUST00000073899 1605 ntAPPRIS P1 TSL 1 (best) BASIC23.62■■□□□ 1.37
Pkd1l3Q2EG98 Fam60a-203ENSMUST00000111562 906 ntAPPRIS P1 TSL 3 BASIC23.61■■□□□ 1.37
Pkd1l3Q2EG98 Tdp2-203ENSMUST00000223804 1136 ntBASIC23.61■■□□□ 1.37
Pkd1l3Q2EG98 A530058N18Rik-201ENSMUST00000128469 646 ntTSL 2 BASIC23.6■■□□□ 1.37
Pkd1l3Q2EG98 Fndc10-201ENSMUST00000099265 2140 ntAPPRIS P1 BASIC23.59■■□□□ 1.37
Pkd1l3Q2EG98 Rpl19-ps4-201ENSMUST00000167150 625 ntBASIC23.58■■□□□ 1.37
Pkd1l3Q2EG98 Frs3-201ENSMUST00000113296 2144 ntAPPRIS P1 TSL 1 (best) BASIC23.58■■□□□ 1.36
Pkd1l3Q2EG98 Pradc1-201ENSMUST00000032080 1038 ntAPPRIS P1 TSL 1 (best) BASIC23.57■■□□□ 1.36
Pkd1l3Q2EG98 Trp53rkb-202ENSMUST00000065753 1375 ntTSL 1 (best) BASIC23.57■■□□□ 1.36
Pkd1l3Q2EG98 Msantd2-201ENSMUST00000048604 2291 ntAPPRIS P1 TSL 1 (best) BASIC23.52■■□□□ 1.36
Pkd1l3Q2EG98 CT030161.2-201ENSMUST00000218666 735 ntTSL 3 BASIC23.52■■□□□ 1.36
Pkd1l3Q2EG98 Mapkapk5-201ENSMUST00000031410 2234 ntAPPRIS P2 TSL 1 (best) BASIC23.51■■□□□ 1.35
Pkd1l3Q2EG98 Dhrs13-203ENSMUST00000122342 1791 ntTSL 1 (best) BASIC23.51■■□□□ 1.35
Pkd1l3Q2EG98 Mocs3-201ENSMUST00000099071 1973 ntAPPRIS P1 BASIC23.5■■□□□ 1.35
Pkd1l3Q2EG98 E2f4-201ENSMUST00000015003 1993 ntAPPRIS P1 TSL 1 (best) BASIC23.49■■□□□ 1.35
Pkd1l3Q2EG98 Dlx4-201ENSMUST00000021241 2282 ntAPPRIS P1 TSL 1 (best) BASIC23.49■■□□□ 1.35
Pkd1l3Q2EG98 Fcho2-203ENSMUST00000109403 1523 ntTSL 5 BASIC23.49■■□□□ 1.35
Pkd1l3Q2EG98 Orai1-202ENSMUST00000121652 1875 ntAPPRIS P1 TSL 1 (best) BASIC23.48■■□□□ 1.35
Pkd1l3Q2EG98 Tmeff1-202ENSMUST00000123476 1224 ntAPPRIS P1 TSL 1 (best) BASIC23.47■■□□□ 1.35
Pkd1l3Q2EG98 1190005I06Rik-201ENSMUST00000123927 844 ntAPPRIS P2 TSL 1 (best) BASIC23.47■■□□□ 1.35
Pkd1l3Q2EG98 Nrtn-201ENSMUST00000044752 1023 ntAPPRIS P1 TSL 1 (best) BASIC23.45■■□□□ 1.35
Pkd1l3Q2EG98 Tnfsf12-202ENSMUST00000181810 1435 ntAPPRIS P1 TSL 1 (best) BASIC23.43■■□□□ 1.34
Pkd1l3Q2EG98 Spata1-201ENSMUST00000029839 1920 ntAPPRIS P1 TSL 1 (best) BASIC23.41■■□□□ 1.34
Pkd1l3Q2EG98 Rbfox2-201ENSMUST00000048145 1720 ntTSL 1 (best) BASIC23.41■■□□□ 1.34
Pkd1l3Q2EG98 Pwwp2a-202ENSMUST00000094294 1814 ntTSL 5 BASIC23.4■■□□□ 1.34
Pkd1l3Q2EG98 Raly-203ENSMUST00000109701 1709 ntAPPRIS P3 TSL 1 (best) BASIC23.39■■□□□ 1.33
Pkd1l3Q2EG98 Gm45855-201ENSMUST00000212546 880 ntBASIC23.39■■□□□ 1.33
Pkd1l3Q2EG98 Aard-201ENSMUST00000090025 1348 ntAPPRIS P1 TSL 1 (best) BASIC23.39■■□□□ 1.33
Pkd1l3Q2EG98 Tnfsfm13-202ENSMUST00000174159 1470 ntAPPRIS ALT2 TSL 2 BASIC23.38■■□□□ 1.33
Pkd1l3Q2EG98 Smarcc2-205ENSMUST00000218228 603 ntTSL 5 BASIC23.37■■□□□ 1.33
Pkd1l3Q2EG98 Gm527-203ENSMUST00000220993 1090 ntTSL 5 BASIC23.37■■□□□ 1.33
Pkd1l3Q2EG98 Ctbp1-206ENSMUST00000201575 2091 ntTSL 1 (best) BASIC23.37■■□□□ 1.33
Pkd1l3Q2EG98 Lsm4-204ENSMUST00000210071 575 ntTSL 5 BASIC23.36■■□□□ 1.33
Pkd1l3Q2EG98 Hoxa13-201ENSMUST00000047993 1309 ntAPPRIS ALT2 TSL 5 BASIC23.36■■□□□ 1.33
Pkd1l3Q2EG98 1700016A09Rik-201ENSMUST00000192004 835 ntBASIC23.36■■□□□ 1.33
Pkd1l3Q2EG98 Ppp2r2d-201ENSMUST00000041097 2081 ntAPPRIS P1 TSL 1 (best) BASIC23.35■■□□□ 1.33
Pkd1l3Q2EG98 Mapk3-202ENSMUST00000057669 1800 ntAPPRIS P2 TSL 1 (best) BASIC23.34■■□□□ 1.33
Pkd1l3Q2EG98 Mon2-207ENSMUST00000219203 1844 ntTSL 1 (best) BASIC23.34■■□□□ 1.33
Pkd1l3Q2EG98 A530058N18Rik-207ENSMUST00000152254 1211 ntTSL 1 (best) BASIC23.33■■□□□ 1.33
Pkd1l3Q2EG98 Dedd-201ENSMUST00000064950 1618 ntAPPRIS P1 TSL 1 (best) BASIC23.32■■□□□ 1.32
Pkd1l3Q2EG98 Hspd1-201ENSMUST00000027123 2423 ntAPPRIS P1 TSL 1 (best) BASIC23.32■■□□□ 1.32
Pkd1l3Q2EG98 Cdk2ap1-201ENSMUST00000031341 1315 ntAPPRIS P2 TSL 1 (best) BASIC23.32■■□□□ 1.32
Pkd1l3Q2EG98 Dtnbp1-201ENSMUST00000072329 1362 ntAPPRIS P2 TSL 1 (best) BASIC23.31■■□□□ 1.32
Pkd1l3Q2EG98 Ube2f-202ENSMUST00000171112 1547 ntAPPRIS P1 TSL 1 (best) BASIC23.3■■□□□ 1.32
Pkd1l3Q2EG98 Macrod2-205ENSMUST00000110063 845 ntTSL 5 BASIC23.28■■□□□ 1.32
Pkd1l3Q2EG98 Gkap1-201ENSMUST00000091579 1523 ntAPPRIS P1 TSL 1 (best) BASIC23.28■■□□□ 1.32
Pkd1l3Q2EG98 Capns1-201ENSMUST00000001845 1600 ntAPPRIS P2 TSL 5 BASIC23.27■■□□□ 1.32
Pkd1l3Q2EG98 Gltp-201ENSMUST00000012028 1762 ntAPPRIS P1 TSL 1 (best) BASIC23.26■■□□□ 1.31
Pkd1l3Q2EG98 Cds2-203ENSMUST00000110158 1247 ntTSL 1 (best) BASIC23.24■■□□□ 1.31
Pkd1l3Q2EG98 BC037032-205ENSMUST00000187080 508 ntTSL 5 BASIC23.23■■□□□ 1.31
Pkd1l3Q2EG98 Gm2415-204ENSMUST00000190235 2004 ntBASIC23.21■■□□□ 1.31
Pkd1l3Q2EG98 March2-205ENSMUST00000173015 1418 ntTSL 3 BASIC23.21■■□□□ 1.31
Pkd1l3Q2EG98 Gm9397-201ENSMUST00000200125 605 ntBASIC23.2■■□□□ 1.3
Pkd1l3Q2EG98 Bok-205ENSMUST00000201863 883 ntAPPRIS P1 TSL 5 BASIC23.2■■□□□ 1.3
Pkd1l3Q2EG98 Prelid3b-201ENSMUST00000016401 1553 ntAPPRIS P1 TSL 1 (best) BASIC23.2■■□□□ 1.3
Pkd1l3Q2EG98 Ube2m-201ENSMUST00000005714 1472 ntAPPRIS P1 TSL 1 (best) BASIC23.2■■□□□ 1.3
Pkd1l3Q2EG98 Mthfd2l-203ENSMUST00000202781 688 ntTSL 1 (best) BASIC23.18■■□□□ 1.3
Pkd1l3Q2EG98 Tnfsfm13-201ENSMUST00000108649 1049 ntAPPRIS ALT2 TSL 5 BASIC23.17■■□□□ 1.3
Pkd1l3Q2EG98 Ubl4a-207ENSMUST00000178691 1038 ntAPPRIS P1 TSL 2 BASIC23.17■■□□□ 1.3
Pkd1l3Q2EG98 1810026B05Rik-202ENSMUST00000184554 782 ntTSL 3 BASIC23.17■■□□□ 1.3
Pkd1l3Q2EG98 Rnd2-201ENSMUST00000001347 1394 ntAPPRIS P1 TSL 1 (best) BASIC23.17■■□□□ 1.3
Pkd1l3Q2EG98 AC150314.2-201ENSMUST00000214135 834 ntTSL 5 BASIC23.16■■□□□ 1.3
Pkd1l3Q2EG98 1110008F13Rik-201ENSMUST00000029165 1045 ntAPPRIS P1 TSL 1 (best) BASIC23.16■■□□□ 1.3
Pkd1l3Q2EG98 4932443I19Rik-201ENSMUST00000166277 799 ntAPPRIS P2 TSL 1 (best) BASIC23.15■■□□□ 1.3
Pkd1l3Q2EG98 Ildr2-207ENSMUST00000195557 1947 ntAPPRIS ALT2 TSL 1 (best) BASIC23.14■■□□□ 1.3
Pkd1l3Q2EG98 E330040D14Rik-201ENSMUST00000192299 1374 ntBASIC23.14■■□□□ 1.29
Pkd1l3Q2EG98 Ranbp1-202ENSMUST00000115645 1085 ntAPPRIS P1 TSL 1 (best) BASIC23.14■■□□□ 1.29
Pkd1l3Q2EG98 Fbxo6-201ENSMUST00000030858 1346 ntAPPRIS P1 TSL 1 (best) BASIC23.14■■□□□ 1.29
Pkd1l3Q2EG98 Tlx1-201ENSMUST00000026236 2065 ntAPPRIS P1 TSL 1 (best) BASIC23.14■■□□□ 1.29
Pkd1l3Q2EG98 C2cd4d-201ENSMUST00000169433 1321 ntAPPRIS P1 TSL 3 BASIC23.13■■□□□ 1.29
Retrieved 100 of 76,532 protein–RNA pairs in 14.2 ms