Protein–RNA interactions for Protein: Q05793

Hspg2, Basement membrane-specific heparan sulfate proteoglycan core protein, mousemouse

Known RBP Predictions only

Length 3,707 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Hspg2Q05793 Ccdc122-202ENSMUST00000095625 1195 ntAPPRIS ALT2 TSL 1 (best) BASIC20.26■□□□□ 0.83
Hspg2Q05793 Zfp131-207ENSMUST00000224946 1783 ntBASIC20.26■□□□□ 0.83
Hspg2Q05793 Chrna5-202ENSMUST00000213960 1737 ntAPPRIS ALT2 TSL 1 (best) BASIC20.25■□□□□ 0.83
Hspg2Q05793 Tnfsfm13-201ENSMUST00000108649 1049 ntAPPRIS ALT2 TSL 5 BASIC20.25■□□□□ 0.83
Hspg2Q05793 Rab22a-202ENSMUST00000109110 849 ntTSL 5 BASIC20.25■□□□□ 0.83
Hspg2Q05793 Fam60a-203ENSMUST00000111562 906 ntAPPRIS P1 TSL 3 BASIC20.25■□□□□ 0.83
Hspg2Q05793 Cdk2ap1-201ENSMUST00000031341 1315 ntAPPRIS P2 TSL 1 (best) BASIC20.25■□□□□ 0.83
Hspg2Q05793 Gm5601-202ENSMUST00000207161 1437 ntTSL 1 (best) BASIC20.25■□□□□ 0.83
Hspg2Q05793 CT030161.2-201ENSMUST00000218666 735 ntTSL 3 BASIC20.25■□□□□ 0.83
Hspg2Q05793 Samd1-201ENSMUST00000095228 2071 ntAPPRIS P1 TSL 5 BASIC20.25■□□□□ 0.83
Hspg2Q05793 Lrrc1-204ENSMUST00000183734 2113 ntTSL 1 (best) BASIC20.22■□□□□ 0.83
Hspg2Q05793 Popdc3-202ENSMUST00000161803 1369 ntTSL 1 (best) BASIC20.22■□□□□ 0.83
Hspg2Q05793 Trp53i13-201ENSMUST00000060417 1463 ntAPPRIS P2 TSL 1 (best) BASIC20.2■□□□□ 0.82
Hspg2Q05793 Spg7-201ENSMUST00000108868 845 ntTSL 2 BASIC20.19■□□□□ 0.82
Hspg2Q05793 Peli2-204ENSMUST00000226513 1320 ntBASIC20.17■□□□□ 0.82
Hspg2Q05793 Tmeff1-202ENSMUST00000123476 1224 ntAPPRIS P1 TSL 1 (best) BASIC20.16■□□□□ 0.82
Hspg2Q05793 Ccm2l-201ENSMUST00000109800 2158 ntAPPRIS P1 TSL 5 BASIC20.16■□□□□ 0.82
Hspg2Q05793 AY074887-201ENSMUST00000054018 769 ntAPPRIS P1 BASIC20.15■□□□□ 0.82
Hspg2Q05793 Dedd-201ENSMUST00000064950 1618 ntAPPRIS P1 TSL 1 (best) BASIC20.15■□□□□ 0.82
Hspg2Q05793 Gm17110-201ENSMUST00000171248 735 ntTSL 3 BASIC20.14■□□□□ 0.82
Hspg2Q05793 Evx2-202ENSMUST00000173623 1428 ntAPPRIS P2 TSL 1 (best) BASIC20.14■□□□□ 0.81
Hspg2Q05793 Cib1-201ENSMUST00000065163 1047 ntAPPRIS P1 TSL 1 (best) BASIC20.13■□□□□ 0.81
Hspg2Q05793 Gm26566-201ENSMUST00000181601 1038 ntAPPRIS P1 BASIC20.13■□□□□ 0.81
Hspg2Q05793 Btf3-201ENSMUST00000022163 1091 ntTSL 1 (best) BASIC20.13■□□□□ 0.81
Hspg2Q05793 Tsen34-203ENSMUST00000108629 1238 ntTSL 1 (best) BASIC20.11■□□□□ 0.81
Hspg2Q05793 Bcl7c-207ENSMUST00000207019 654 ntTSL 3 BASIC20.1■□□□□ 0.81
Hspg2Q05793 Mkrn1-202ENSMUST00000051671 1511 ntTSL 1 (best) BASIC20.09■□□□□ 0.81
Hspg2Q05793 Gng13-201ENSMUST00000115108 347 ntAPPRIS P1 TSL 1 (best) BASIC20.09■□□□□ 0.81
Hspg2Q05793 BC037032-205ENSMUST00000187080 508 ntTSL 5 BASIC20.09■□□□□ 0.81
Hspg2Q05793 Ppp1r14b-201ENSMUST00000070850 919 ntAPPRIS P1 TSL 1 (best) BASIC20.09■□□□□ 0.81
Hspg2Q05793 Gnai2-202ENSMUST00000192615 1777 ntAPPRIS P1 TSL 1 (best) BASIC20.08■□□□□ 0.81
Hspg2Q05793 A330023F24Rik-201ENSMUST00000181226 955 ntTSL 1 (best) BASIC20.07■□□□□ 0.8
Hspg2Q05793 Gm9397-201ENSMUST00000200125 605 ntBASIC20.06■□□□□ 0.8
Hspg2Q05793 Cetn4-202ENSMUST00000075537 762 ntTSL 3 BASIC20.04■□□□□ 0.8
Hspg2Q05793 G6pc3-202ENSMUST00000078975 1573 ntAPPRIS P1 TSL 1 (best) BASIC20.04■□□□□ 0.8
Hspg2Q05793 1700016A09Rik-201ENSMUST00000192004 835 ntBASIC20.02■□□□□ 0.79
Hspg2Q05793 1110008F13Rik-201ENSMUST00000029165 1045 ntAPPRIS P1 TSL 1 (best) BASIC20.01■□□□□ 0.79
Hspg2Q05793 Ube2q2-202ENSMUST00000121677 1680 ntAPPRIS ALT2 TSL 5 BASIC20■□□□□ 0.79
Hspg2Q05793 Gm20503-201ENSMUST00000174664 1294 ntAPPRIS P1 TSL 5 BASIC20■□□□□ 0.79
Hspg2Q05793 Crlf1-201ENSMUST00000008032 1644 ntAPPRIS P1 TSL 1 (best) BASIC20■□□□□ 0.79
Hspg2Q05793 C2cd4d-201ENSMUST00000169433 1321 ntAPPRIS P1 TSL 3 BASIC19.99■□□□□ 0.79
Hspg2Q05793 Foxd3-201ENSMUST00000087285 2324 ntAPPRIS P1 BASIC19.99■□□□□ 0.79
Hspg2Q05793 Wsb2-201ENSMUST00000031309 2421 ntAPPRIS P2 TSL 1 (best) BASIC19.99■□□□□ 0.79
Hspg2Q05793 Kcnmb4os2-201ENSMUST00000080943 1571 ntTSL 5 BASIC19.98■□□□□ 0.79
Hspg2Q05793 1810026B05Rik-202ENSMUST00000184554 782 ntTSL 3 BASIC19.96■□□□□ 0.79
Hspg2Q05793 Gm29254-202ENSMUST00000189302 883 ntTSL 1 (best) BASIC19.96■□□□□ 0.79
Hspg2Q05793 Aard-201ENSMUST00000090025 1348 ntAPPRIS P1 TSL 1 (best) BASIC19.94■□□□□ 0.78
Hspg2Q05793 Zfyve21-201ENSMUST00000021714 1308 ntAPPRIS P2 TSL 1 (best) BASIC19.93■□□□□ 0.78
Hspg2Q05793 Snx24-202ENSMUST00000165032 1880 ntAPPRIS P1 TSL 1 (best) BASIC19.93■□□□□ 0.78
Hspg2Q05793 Abhd17a-201ENSMUST00000003436 1468 ntAPPRIS P1 TSL 1 (best) BASIC19.91■□□□□ 0.78
Hspg2Q05793 Orai1-201ENSMUST00000051016 1482 ntAPPRIS P1 TSL 1 (best) BASIC19.91■□□□□ 0.78
Hspg2Q05793 Gm26699-201ENSMUST00000180825 2291 ntTSL 5 BASIC19.9■□□□□ 0.78
Hspg2Q05793 Mthfd2l-203ENSMUST00000202781 688 ntTSL 1 (best) BASIC19.9■□□□□ 0.78
Hspg2Q05793 9230104M06Rik-201ENSMUST00000180971 1963 ntBASIC19.9■□□□□ 0.78
Hspg2Q05793 Qrich1-209ENSMUST00000194385 975 ntTSL 2 BASIC19.89■□□□□ 0.77
Hspg2Q05793 Cadm4-201ENSMUST00000068023 2161 ntAPPRIS P1 TSL 1 (best) BASIC19.88■□□□□ 0.77
Hspg2Q05793 March2-205ENSMUST00000173015 1418 ntTSL 3 BASIC19.87■□□□□ 0.77
Hspg2Q05793 Syt7-201ENSMUST00000073899 1605 ntAPPRIS P1 TSL 1 (best) BASIC19.86■□□□□ 0.77
Hspg2Q05793 Crip2-201ENSMUST00000084882 1439 ntAPPRIS P1 TSL 1 (best) BASIC19.86■□□□□ 0.77
Hspg2Q05793 Nemp1-202ENSMUST00000118612 1522 ntTSL 1 (best) BASIC19.86■□□□□ 0.77
Hspg2Q05793 Atp1b3-201ENSMUST00000034983 1994 ntAPPRIS P1 TSL 1 (best) BASIC19.85■□□□□ 0.77
Hspg2Q05793 Gm12523-201ENSMUST00000148844 599 ntTSL 5 BASIC19.85■□□□□ 0.77
Hspg2Q05793 Gm24970-201ENSMUST00000175582 82 ntBASIC19.85■□□□□ 0.77
Hspg2Q05793 1810026B05Rik-206ENSMUST00000187421 519 ntTSL 3 BASIC19.85■□□□□ 0.77
Hspg2Q05793 Mxra7-202ENSMUST00000047715 757 ntAPPRIS ALT2 TSL 1 (best) BASIC19.85■□□□□ 0.77
Hspg2Q05793 Gnai2-201ENSMUST00000055704 2215 ntAPPRIS P1 TSL 1 (best) BASIC19.85■□□□□ 0.77
Hspg2Q05793 Capns1-201ENSMUST00000001845 1600 ntAPPRIS P2 TSL 5 BASIC19.84■□□□□ 0.77
Hspg2Q05793 Mipep-204ENSMUST00000225043 1548 ntBASIC19.81■□□□□ 0.76
Hspg2Q05793 Tmem259-201ENSMUST00000052885 2225 ntAPPRIS P1 TSL 1 (best) BASIC19.8■□□□□ 0.76
Hspg2Q05793 Fbxo6-201ENSMUST00000030858 1346 ntAPPRIS P1 TSL 1 (best) BASIC19.79■□□□□ 0.76
Hspg2Q05793 C1qtnf5-201ENSMUST00000114815 1215 ntAPPRIS P1 TSL 1 (best) BASIC19.79■□□□□ 0.76
Hspg2Q05793 Trp53rkb-202ENSMUST00000065753 1375 ntTSL 1 (best) BASIC19.79■□□□□ 0.76
Hspg2Q05793 Dhrs13-203ENSMUST00000122342 1791 ntTSL 1 (best) BASIC19.78■□□□□ 0.76
Hspg2Q05793 Uba52-207ENSMUST00000140679 697 ntAPPRIS P1 TSL 2 BASIC19.78■□□□□ 0.76
Hspg2Q05793 Cenpv-201ENSMUST00000018653 1032 ntAPPRIS P1 TSL 1 (best) BASIC19.75■□□□□ 0.75
Hspg2Q05793 Gm8503-201ENSMUST00000118131 455 ntBASIC19.74■□□□□ 0.75
Hspg2Q05793 Calm3-201ENSMUST00000019514 2290 ntAPPRIS P1 TSL 1 (best) BASIC19.73■□□□□ 0.75
Hspg2Q05793 Dlx6os2-201ENSMUST00000178206 1354 ntBASIC19.71■□□□□ 0.75
Hspg2Q05793 Stradb-202ENSMUST00000114296 1348 ntTSL 1 (best) BASIC19.7■□□□□ 0.74
Hspg2Q05793 Scx-201ENSMUST00000043089 1136 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
Hspg2Q05793 Eif5a-201ENSMUST00000043419 1437 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
Hspg2Q05793 Gm9939-201ENSMUST00000067161 1154 ntBASIC19.67■□□□□ 0.74
Hspg2Q05793 4930542C12Rik-201ENSMUST00000171096 1203 ntBASIC19.67■□□□□ 0.74
Hspg2Q05793 Lactb-202ENSMUST00000215172 1806 ntTSL 1 (best) BASIC19.66■□□□□ 0.74
Hspg2Q05793 Macrod2-205ENSMUST00000110063 845 ntTSL 5 BASIC19.66■□□□□ 0.74
Hspg2Q05793 Naa20-201ENSMUST00000002805 1172 ntTSL 1 (best) BASIC19.64■□□□□ 0.74
Hspg2Q05793 Vsig8-202ENSMUST00000177086 1519 ntTSL 1 (best) BASIC19.64■□□□□ 0.73
Hspg2Q05793 Ube2f-202ENSMUST00000171112 1547 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
Hspg2Q05793 Sowahd-201ENSMUST00000060057 1574 ntAPPRIS P1 BASIC19.63■□□□□ 0.73
Hspg2Q05793 A530058N18Rik-207ENSMUST00000152254 1211 ntTSL 1 (best) BASIC19.62■□□□□ 0.73
Hspg2Q05793 Dapk3-209ENSMUST00000219850 1482 ntAPPRIS P1 TSL 1 (best) BASIC19.58■□□□□ 0.72
Hspg2Q05793 Hspb1-202ENSMUST00000111155 930 ntTSL 1 (best) BASIC19.58■□□□□ 0.72
Hspg2Q05793 Tada2b-202ENSMUST00000119916 1321 ntTSL 5 BASIC19.55■□□□□ 0.72
Hspg2Q05793 Stard3nl-210ENSMUST00000222869 1030 ntTSL 5 BASIC19.54■□□□□ 0.72
Hspg2Q05793 Macrod1-201ENSMUST00000040261 1274 ntAPPRIS P1 TSL 1 (best) BASIC19.54■□□□□ 0.72
Hspg2Q05793 Tmem243-201ENSMUST00000115365 1040 ntAPPRIS P1 TSL 2 BASIC19.52■□□□□ 0.72
Hspg2Q05793 Rnf215-201ENSMUST00000003677 1874 ntAPPRIS P1 TSL 1 (best) BASIC19.52■□□□□ 0.71
Hspg2Q05793 Egln2-201ENSMUST00000080058 2107 ntAPPRIS P1 TSL 1 (best) BASIC19.51■□□□□ 0.71
Hspg2Q05793 Shf-201ENSMUST00000048635 1431 ntAPPRIS P2 TSL 1 (best) BASIC19.51■□□□□ 0.71
Hspg2Q05793 Fam241a-202ENSMUST00000199273 2234 ntAPPRIS P1 TSL 1 (best) BASIC19.5■□□□□ 0.71
Retrieved 100 of 76,532 protein–RNA pairs in 13.5 ms