Protein–RNA interactions for Protein: P84444

Ccl21a, C-C motif chemokine 21a, mousemouse

Predictions only

Length 133 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ccl21aP84444 1110008F13Rik-201ENSMUST00000029165 1045 ntAPPRIS P1 TSL 1 (best) BASIC22,91■■□□□ 1,26
Ccl21aP84444 Ppp1r14b-201ENSMUST00000070850 919 ntAPPRIS P1 TSL 1 (best) BASIC22,87■■□□□ 1,25
Ccl21aP84444 Dut-202ENSMUST00000082122 1020 ntTSL 1 (best) BASIC22,86■■□□□ 1,25
Ccl21aP84444 Rab22a-202ENSMUST00000109110 849 ntTSL 5 BASIC22,85■■□□□ 1,25
Ccl21aP84444 Hoxa13-201ENSMUST00000047993 1309 ntAPPRIS ALT2 TSL 5 BASIC22,83■■□□□ 1,25
Ccl21aP84444 Cenpv-201ENSMUST00000018653 1032 ntAPPRIS P1 TSL 1 (best) BASIC22,83■■□□□ 1,25
Ccl21aP84444 Mthfd2l-203ENSMUST00000202781 688 ntTSL 1 (best) BASIC22,83■■□□□ 1,25
Ccl21aP84444 Spg7-201ENSMUST00000108868 845 ntTSL 2 BASIC22,82■■□□□ 1,24
Ccl21aP84444 Gm5601-202ENSMUST00000207161 1437 ntTSL 1 (best) BASIC22,82■■□□□ 1,24
Ccl21aP84444 Trp53i13-201ENSMUST00000060417 1463 ntAPPRIS P2 TSL 1 (best) BASIC22,81■■□□□ 1,24
Ccl21aP84444 Gnai2-202ENSMUST00000192615 1777 ntAPPRIS P1 TSL 1 (best) BASIC22,81■■□□□ 1,24
Ccl21aP84444 Aard-201ENSMUST00000090025 1348 ntAPPRIS P1 TSL 1 (best) BASIC22,81■■□□□ 1,24
Ccl21aP84444 Jdp2-203ENSMUST00000177587 1645 ntAPPRIS P1 TSL 1 (best) BASIC22,8■■□□□ 1,24
Ccl21aP84444 Gm9397-201ENSMUST00000200125 605 ntBASIC22,79■■□□□ 1,24
Ccl21aP84444 Mxra7-202ENSMUST00000047715 757 ntAPPRIS ALT2 TSL 1 (best) BASIC22,79■■□□□ 1,24
Ccl21aP84444 Crip2-201ENSMUST00000084882 1439 ntAPPRIS P1 TSL 1 (best) BASIC22,79■■□□□ 1,24
Ccl21aP84444 Fbxo6-203ENSMUST00000105706 1938 ntAPPRIS P1 TSL 1 (best) BASIC22,78■■□□□ 1,24
Ccl21aP84444 Gng13-201ENSMUST00000115108 347 ntAPPRIS P1 TSL 1 (best) BASIC22,78■■□□□ 1,24
Ccl21aP84444 Samd1-201ENSMUST00000095228 2071 ntAPPRIS P1 TSL 5 BASIC22,78■■□□□ 1,24
Ccl21aP84444 C1qtnf5-201ENSMUST00000114815 1215 ntAPPRIS P1 TSL 1 (best) BASIC22,77■■□□□ 1,24
Ccl21aP84444 Gm2018-201ENSMUST00000140754 478 ntTSL 2 BASIC22,77■■□□□ 1,24
Ccl21aP84444 A530058N18Rik-207ENSMUST00000152254 1211 ntTSL 1 (best) BASIC22,77■■□□□ 1,24
Ccl21aP84444 Gm20503-201ENSMUST00000174664 1294 ntAPPRIS P1 TSL 5 BASIC22,77■■□□□ 1,24
Ccl21aP84444 Cib1-201ENSMUST00000065163 1047 ntAPPRIS P1 TSL 1 (best) BASIC22,77■■□□□ 1,24
Ccl21aP84444 Ube2e2-205ENSMUST00000150727 1523 ntAPPRIS P1 TSL 1 (best) BASIC22,77■■□□□ 1,24
Ccl21aP84444 C2cd4d-201ENSMUST00000169433 1321 ntAPPRIS P1 TSL 3 BASIC22,74■■□□□ 1,23
Ccl21aP84444 Dedd-201ENSMUST00000064950 1618 ntAPPRIS P1 TSL 1 (best) BASIC22,72■■□□□ 1,23
Ccl21aP84444 Capns1-201ENSMUST00000001845 1600 ntAPPRIS P2 TSL 5 BASIC22,71■■□□□ 1,23
Ccl21aP84444 Qrich1-209ENSMUST00000194385 975 ntTSL 2 BASIC22,7■■□□□ 1,22
Ccl21aP84444 Zfp131-207ENSMUST00000224946 1783 ntBASIC22,69■■□□□ 1,22
Ccl21aP84444 AY074887-201ENSMUST00000054018 769 ntAPPRIS P1 BASIC22,69■■□□□ 1,22
Ccl21aP84444 A330023F24Rik-201ENSMUST00000181226 955 ntTSL 1 (best) BASIC22,68■■□□□ 1,22
Ccl21aP84444 AC158592.1-201ENSMUST00000215560 1113 ntTSL 5 BASIC22,68■■□□□ 1,22
Ccl21aP84444 Syt7-201ENSMUST00000073899 1605 ntAPPRIS P1 TSL 1 (best) BASIC22,67■■□□□ 1,22
Ccl21aP84444 Kcnmb4os2-201ENSMUST00000080943 1571 ntTSL 5 BASIC22,67■■□□□ 1,22
Ccl21aP84444 Fbxo6-201ENSMUST00000030858 1346 ntAPPRIS P1 TSL 1 (best) BASIC22,66■■□□□ 1,22
Ccl21aP84444 Evx2-202ENSMUST00000173623 1428 ntAPPRIS P2 TSL 1 (best) BASIC22,65■■□□□ 1,22
Ccl21aP84444 Orai1-201ENSMUST00000051016 1482 ntAPPRIS P1 TSL 1 (best) BASIC22,65■■□□□ 1,22
Ccl21aP84444 BC037032-205ENSMUST00000187080 508 ntTSL 5 BASIC22,64■■□□□ 1,21
Ccl21aP84444 Gm29254-202ENSMUST00000189302 883 ntTSL 1 (best) BASIC22,63■■□□□ 1,21
Ccl21aP84444 Gm12523-201ENSMUST00000148844 599 ntTSL 5 BASIC22,62■■□□□ 1,21
Ccl21aP84444 Macrod2-205ENSMUST00000110063 845 ntTSL 5 BASIC22,61■■□□□ 1,21
Ccl21aP84444 Gm42517-201ENSMUST00000197216 1850 ntAPPRIS P1 BASIC22,6■■□□□ 1,21
Ccl21aP84444 Cetn4-202ENSMUST00000075537 762 ntTSL 3 BASIC22,6■■□□□ 1,21
Ccl21aP84444 Glt8d1-201ENSMUST00000022476 2018 ntAPPRIS P1 TSL 1 (best) BASIC22,59■■□□□ 1,21
Ccl21aP84444 Tsen34-203ENSMUST00000108629 1238 ntTSL 1 (best) BASIC22,59■■□□□ 1,21
Ccl21aP84444 Vsig8-201ENSMUST00000061835 1801 ntAPPRIS P1 TSL 1 (best) BASIC22,57■■□□□ 1,2
Ccl21aP84444 Mipep-204ENSMUST00000225043 1548 ntBASIC22,57■■□□□ 1,2
Ccl21aP84444 March2-205ENSMUST00000173015 1418 ntTSL 3 BASIC22,55■■□□□ 1,2
Ccl21aP84444 Trp53rkb-202ENSMUST00000065753 1375 ntTSL 1 (best) BASIC22,54■■□□□ 1,2
Ccl21aP84444 1810026B05Rik-202ENSMUST00000184554 782 ntTSL 3 BASIC22,54■■□□□ 1,2
Ccl21aP84444 Bcl7c-207ENSMUST00000207019 654 ntTSL 3 BASIC22,53■■□□□ 1,2
Ccl21aP84444 Nemp1-202ENSMUST00000118612 1522 ntTSL 1 (best) BASIC22,51■■□□□ 1,19
Ccl21aP84444 Uba52-207ENSMUST00000140679 697 ntAPPRIS P1 TSL 2 BASIC22,5■■□□□ 1,19
Ccl21aP84444 1810026B05Rik-206ENSMUST00000187421 519 ntTSL 3 BASIC22,5■■□□□ 1,19
Ccl21aP84444 Crlf1-201ENSMUST00000008032 1644 ntAPPRIS P1 TSL 1 (best) BASIC22,49■■□□□ 1,19
Ccl21aP84444 Lrrc1-204ENSMUST00000183734 2113 ntTSL 1 (best) BASIC22,49■■□□□ 1,19
Ccl21aP84444 Macrod1-201ENSMUST00000040261 1274 ntAPPRIS P1 TSL 1 (best) BASIC22,44■■□□□ 1,18
Ccl21aP84444 Gm24970-201ENSMUST00000175582 82 ntBASIC22,41■■□□□ 1,18
Ccl21aP84444 Gm17110-201ENSMUST00000171248 735 ntTSL 3 BASIC22,4■■□□□ 1,18
Ccl21aP84444 Gm9939-201ENSMUST00000067161 1154 ntBASIC22,4■■□□□ 1,18
Ccl21aP84444 Ube2q2-202ENSMUST00000121677 1680 ntAPPRIS ALT2 TSL 5 BASIC22,39■■□□□ 1,18
Ccl21aP84444 Tmem243-201ENSMUST00000115365 1040 ntAPPRIS P1 TSL 2 BASIC22,39■■□□□ 1,17
Ccl21aP84444 Stard3nl-210ENSMUST00000222869 1030 ntTSL 5 BASIC22,39■■□□□ 1,17
Ccl21aP84444 Dapk3-209ENSMUST00000219850 1482 ntAPPRIS P1 TSL 1 (best) BASIC22,39■■□□□ 1,17
Ccl21aP84444 Shf-201ENSMUST00000048635 1431 ntAPPRIS P2 TSL 1 (best) BASIC22,39■■□□□ 1,17
Ccl21aP84444 Zfyve21-201ENSMUST00000021714 1308 ntAPPRIS P2 TSL 1 (best) BASIC22,38■■□□□ 1,17
Ccl21aP84444 Naa20-201ENSMUST00000002805 1172 ntTSL 1 (best) BASIC22,35■■□□□ 1,17
Ccl21aP84444 Snx24-202ENSMUST00000165032 1880 ntAPPRIS P1 TSL 1 (best) BASIC22,34■■□□□ 1,17
Ccl21aP84444 4930542C12Rik-201ENSMUST00000171096 1203 ntBASIC22,34■■□□□ 1,17
Ccl21aP84444 Gm8503-201ENSMUST00000118131 455 ntBASIC22,32■■□□□ 1,16
Ccl21aP84444 Abhd17a-201ENSMUST00000003436 1468 ntAPPRIS P1 TSL 1 (best) BASIC22,32■■□□□ 1,16
Ccl21aP84444 Casp9-202ENSMUST00000097805 1498 ntTSL 1 (best) BASIC22,3■■□□□ 1,16
Ccl21aP84444 Stradb-202ENSMUST00000114296 1348 ntTSL 1 (best) BASIC22,27■■□□□ 1,16
Ccl21aP84444 9230104M06Rik-201ENSMUST00000180971 1963 ntBASIC22,25■■□□□ 1,15
Ccl21aP84444 Gm6821-201ENSMUST00000107540 542 ntBASIC22,24■■□□□ 1,15
Ccl21aP84444 Scx-201ENSMUST00000043089 1136 ntAPPRIS P1 TSL 1 (best) BASIC22,23■■□□□ 1,15
Ccl21aP84444 Eif5a-201ENSMUST00000043419 1437 ntAPPRIS P1 TSL 1 (best) BASIC22,22■■□□□ 1,15
Ccl21aP84444 Ube2f-202ENSMUST00000171112 1547 ntAPPRIS P1 TSL 1 (best) BASIC22,21■■□□□ 1,15
Ccl21aP84444 Dlx6os2-201ENSMUST00000178206 1354 ntBASIC22,21■■□□□ 1,15
Ccl21aP84444 Hrh3-208ENSMUST00000171736 906 ntTSL 5 BASIC22,2■■□□□ 1,14
Ccl21aP84444 E330040D14Rik-201ENSMUST00000192299 1374 ntBASIC22,2■■□□□ 1,14
Ccl21aP84444 Anapc11-202ENSMUST00000093140 962 ntAPPRIS P1 TSL 1 (best) BASIC22,19■■□□□ 1,14
Ccl21aP84444 Vsig8-202ENSMUST00000177086 1519 ntTSL 1 (best) BASIC22,19■■□□□ 1,14
Ccl21aP84444 Dhrs13-203ENSMUST00000122342 1791 ntTSL 1 (best) BASIC22,17■■□□□ 1,14
Ccl21aP84444 Junos-204ENSMUST00000128094 830 ntTSL 1 (best) BASIC22,14■■□□□ 1,13
Ccl21aP84444 Dtnbp1-202ENSMUST00000110128 1305 ntAPPRIS ALT2 TSL 5 BASIC22,13■■□□□ 1,13
Ccl21aP84444 Fcho2-203ENSMUST00000109403 1523 ntTSL 5 BASIC22,12■■□□□ 1,13
Ccl21aP84444 Gm527-201ENSMUST00000058135 1468 ntAPPRIS P1 TSL 1 (best) BASIC22,09■■□□□ 1,13
Ccl21aP84444 Ranbp1-202ENSMUST00000115645 1085 ntAPPRIS P1 TSL 1 (best) BASIC22,09■■□□□ 1,13
Ccl21aP84444 Tceal5-201ENSMUST00000066819 1044 ntAPPRIS P1 TSL 1 (best) BASIC22,09■■□□□ 1,13
Ccl21aP84444 Rnd2-201ENSMUST00000001347 1394 ntAPPRIS P1 TSL 1 (best) BASIC22,08■■□□□ 1,12
Ccl21aP84444 Sowahd-201ENSMUST00000060057 1574 ntAPPRIS P1 BASIC22,06■■□□□ 1,12
Ccl21aP84444 Lmo2-201ENSMUST00000111139 1434 ntTSL 5 BASIC22,02■■□□□ 1,12
Ccl21aP84444 Twist1-201ENSMUST00000049089 1628 ntAPPRIS P1 TSL 1 (best) BASIC22,01■■□□□ 1,11
Ccl21aP84444 Gm43863-201ENSMUST00000203822 1192 ntBASIC22■■□□□ 1,11
Ccl21aP84444 Tnfsf12-202ENSMUST00000181810 1435 ntAPPRIS P1 TSL 1 (best) BASIC21,99■■□□□ 1,11
Ccl21aP84444 Tcte3-201ENSMUST00000040746 788 ntAPPRIS P1 TSL 1 (best) BASIC21,99■■□□□ 1,11
Ccl21aP84444 Tcte3-202ENSMUST00000097398 632 ntTSL 1 (best) BASIC21,99■■□□□ 1,11
Ccl21aP84444 Tada2b-202ENSMUST00000119916 1321 ntTSL 5 BASIC21,99■■□□□ 1,11
Retrieved 100 of 76,532 protein–RNA pairs in 16,6 ms