Protein–RNA interactions for Protein: P62960

Ybx1, Nuclease-sensitive element-binding protein 1, mousemouse

Known RBP Predictions only

Length 322 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ybx1P62960 Ube2q2-202ENSMUST00000121677 1680 ntAPPRIS ALT2 TSL 5 BASIC27.46■■□□□ 1.99
Ybx1P62960 Gm266-201ENSMUST00000010673 1215 ntAPPRIS P1 BASIC27.44■■□□□ 1.98
Ybx1P62960 Mipep-204ENSMUST00000225043 1548 ntBASIC27.44■■□□□ 1.98
Ybx1P62960 Gm10762-201ENSMUST00000099385 1133 ntAPPRIS P1 BASIC27.43■■□□□ 1.98
Ybx1P62960 Eif2ak3-204ENSMUST00000162950 927 ntTSL 1 (best) BASIC27.42■■□□□ 1.98
Ybx1P62960 Rab22a-202ENSMUST00000109110 849 ntTSL 5 BASIC27.41■■□□□ 1.98
Ybx1P62960 Gm42517-201ENSMUST00000197216 1850 ntAPPRIS P1 BASIC27.39■■□□□ 1.98
Ybx1P62960 Slc25a28-201ENSMUST00000046038 1514 ntAPPRIS P1 TSL 1 (best) BASIC27.36■■□□□ 1.97
Ybx1P62960 Rnf215-201ENSMUST00000003677 1874 ntAPPRIS P1 TSL 1 (best) BASIC27.36■■□□□ 1.97
Ybx1P62960 Atp1b3-201ENSMUST00000034983 1994 ntAPPRIS P1 TSL 1 (best) BASIC27.36■■□□□ 1.97
Ybx1P62960 Ldb1-208ENSMUST00000185355 2088 ntTSL 1 (best) BASIC27.36■■□□□ 1.97
Ybx1P62960 Tdp2-203ENSMUST00000223804 1136 ntBASIC27.34■■□□□ 1.97
Ybx1P62960 Ccdc122-202ENSMUST00000095625 1195 ntAPPRIS ALT2 TSL 1 (best) BASIC27.34■■□□□ 1.97
Ybx1P62960 Epcam-201ENSMUST00000053577 2040 ntAPPRIS P1 TSL 5 BASIC27.33■■□□□ 1.97
Ybx1P62960 Nrtn-201ENSMUST00000044752 1023 ntAPPRIS P1 TSL 1 (best) BASIC27.33■■□□□ 1.97
Ybx1P62960 CT030161.2-201ENSMUST00000218666 735 ntTSL 3 BASIC27.32■■□□□ 1.96
Ybx1P62960 Gm5601-202ENSMUST00000207161 1437 ntTSL 1 (best) BASIC27.31■■□□□ 1.96
Ybx1P62960 Tmeff1-202ENSMUST00000123476 1224 ntAPPRIS P1 TSL 1 (best) BASIC27.3■■□□□ 1.96
Ybx1P62960 1700016A09Rik-201ENSMUST00000192004 835 ntBASIC27.3■■□□□ 1.96
Ybx1P62960 Gm527-203ENSMUST00000220993 1090 ntTSL 5 BASIC27.3■■□□□ 1.96
Ybx1P62960 Cadm4-201ENSMUST00000068023 2161 ntAPPRIS P1 TSL 1 (best) BASIC27.3■■□□□ 1.96
Ybx1P62960 Kcnmb4os2-201ENSMUST00000080943 1571 ntTSL 5 BASIC27.27■■□□□ 1.96
Ybx1P62960 Casp9-202ENSMUST00000097805 1498 ntTSL 1 (best) BASIC27.26■■□□□ 1.95
Ybx1P62960 Syt7-201ENSMUST00000073899 1605 ntAPPRIS P1 TSL 1 (best) BASIC27.26■■□□□ 1.95
Ybx1P62960 Crlf1-201ENSMUST00000008032 1644 ntAPPRIS P1 TSL 1 (best) BASIC27.25■■□□□ 1.95
Ybx1P62960 1190005I06Rik-201ENSMUST00000123927 844 ntAPPRIS P2 TSL 1 (best) BASIC27.24■■□□□ 1.95
Ybx1P62960 Lsm4-204ENSMUST00000210071 575 ntTSL 5 BASIC27.24■■□□□ 1.95
Ybx1P62960 Gm26588-201ENSMUST00000181064 2098 ntTSL 1 (best) BASIC27.23■■□□□ 1.95
Ybx1P62960 Shf-201ENSMUST00000048635 1431 ntAPPRIS P2 TSL 1 (best) BASIC27.21■■□□□ 1.95
Ybx1P62960 A530058N18Rik-201ENSMUST00000128469 646 ntTSL 2 BASIC27.18■■□□□ 1.94
Ybx1P62960 Six3-202ENSMUST00000175898 2419 ntAPPRIS P2 TSL 1 (best) BASIC27.16■■□□□ 1.94
Ybx1P62960 Dapk3-209ENSMUST00000219850 1482 ntAPPRIS P1 TSL 1 (best) BASIC27.13■■□□□ 1.93
Ybx1P62960 Gm45855-201ENSMUST00000212546 880 ntBASIC27.11■■□□□ 1.93
Ybx1P62960 Hoxa13-201ENSMUST00000047993 1309 ntAPPRIS ALT2 TSL 5 BASIC27.11■■□□□ 1.93
Ybx1P62960 AC150314.2-201ENSMUST00000214135 834 ntTSL 5 BASIC27.08■■□□□ 1.93
Ybx1P62960 Abhd17a-201ENSMUST00000003436 1468 ntAPPRIS P1 TSL 1 (best) BASIC27.07■■□□□ 1.92
Ybx1P62960 4932443I19Rik-201ENSMUST00000166277 799 ntAPPRIS P2 TSL 1 (best) BASIC27.07■■□□□ 1.92
Ybx1P62960 Lactb-202ENSMUST00000215172 1806 ntTSL 1 (best) BASIC27.05■■□□□ 1.92
Ybx1P62960 Fcho2-203ENSMUST00000109403 1523 ntTSL 5 BASIC27.04■■□□□ 1.92
Ybx1P62960 Emx1-201ENSMUST00000045942 1561 ntAPPRIS P1 TSL 1 (best) BASIC27.04■■□□□ 1.92
Ybx1P62960 Tnfsfm13-201ENSMUST00000108649 1049 ntAPPRIS ALT2 TSL 5 BASIC27.03■■□□□ 1.92
Ybx1P62960 Stk24-201ENSMUST00000079817 2676 ntAPPRIS P1 TSL 1 (best) BASIC27.03■■□□□ 1.92
Ybx1P62960 Macrod2-205ENSMUST00000110063 845 ntTSL 5 BASIC27.02■■□□□ 1.92
Ybx1P62960 Egln2-201ENSMUST00000080058 2107 ntAPPRIS P1 TSL 1 (best) BASIC27.02■■□□□ 1.92
Ybx1P62960 Gnai2-201ENSMUST00000055704 2215 ntAPPRIS P1 TSL 1 (best) BASIC27.01■■□□□ 1.91
Ybx1P62960 Dtnbp1-201ENSMUST00000072329 1362 ntAPPRIS P2 TSL 1 (best) BASIC27■■□□□ 1.91
Ybx1P62960 Calm3-201ENSMUST00000019514 2290 ntAPPRIS P1 TSL 1 (best) BASIC27■■□□□ 1.91
Ybx1P62960 Aard-201ENSMUST00000090025 1348 ntAPPRIS P1 TSL 1 (best) BASIC26.99■■□□□ 1.91
Ybx1P62960 Trp53rkb-202ENSMUST00000065753 1375 ntTSL 1 (best) BASIC26.98■■□□□ 1.91
Ybx1P62960 A530058N18Rik-207ENSMUST00000152254 1211 ntTSL 1 (best) BASIC26.98■■□□□ 1.91
Ybx1P62960 Dedd-201ENSMUST00000064950 1618 ntAPPRIS P1 TSL 1 (best) BASIC26.97■■□□□ 1.91
Ybx1P62960 Smarcc2-205ENSMUST00000218228 603 ntTSL 5 BASIC26.96■■□□□ 1.91
Ybx1P62960 Cdk2ap1-201ENSMUST00000031341 1315 ntAPPRIS P2 TSL 1 (best) BASIC26.94■■□□□ 1.9
Ybx1P62960 Brsk2-203ENSMUST00000078200 2363 ntAPPRIS P4 TSL 1 (best) BASIC26.93■■□□□ 1.9
Ybx1P62960 Gm9397-201ENSMUST00000200125 605 ntBASIC26.92■■□□□ 1.9
Ybx1P62960 Dhrs13-203ENSMUST00000122342 1791 ntTSL 1 (best) BASIC26.91■■□□□ 1.9
Ybx1P62960 Fam241a-202ENSMUST00000199273 2234 ntAPPRIS P1 TSL 1 (best) BASIC26.9■■□□□ 1.9
Ybx1P62960 1110008F13Rik-201ENSMUST00000029165 1045 ntAPPRIS P1 TSL 1 (best) BASIC26.89■■□□□ 1.9
Ybx1P62960 Mthfd2l-203ENSMUST00000202781 688 ntTSL 1 (best) BASIC26.87■■□□□ 1.89
Ybx1P62960 Fbxo6-201ENSMUST00000030858 1346 ntAPPRIS P1 TSL 1 (best) BASIC26.87■■□□□ 1.89
Ybx1P62960 Cds2-203ENSMUST00000110158 1247 ntTSL 1 (best) BASIC26.86■■□□□ 1.89
Ybx1P62960 Qrich1-209ENSMUST00000194385 975 ntTSL 2 BASIC26.85■■□□□ 1.89
Ybx1P62960 Ube2f-202ENSMUST00000171112 1547 ntAPPRIS P1 TSL 1 (best) BASIC26.83■■□□□ 1.89
Ybx1P62960 Capns1-201ENSMUST00000001845 1600 ntAPPRIS P2 TSL 5 BASIC26.83■■□□□ 1.88
Ybx1P62960 Ppp1r14b-201ENSMUST00000070850 919 ntAPPRIS P1 TSL 1 (best) BASIC26.82■■□□□ 1.88
Ybx1P62960 Crip2-201ENSMUST00000084882 1439 ntAPPRIS P1 TSL 1 (best) BASIC26.82■■□□□ 1.88
Ybx1P62960 Wsb2-201ENSMUST00000031309 2421 ntAPPRIS P2 TSL 1 (best) BASIC26.81■■□□□ 1.88
Ybx1P62960 2810459M11Rik-201ENSMUST00000027429 1225 ntAPPRIS ALT2 TSL 1 (best) BASIC26.8■■□□□ 1.88
Ybx1P62960 BC037032-205ENSMUST00000187080 508 ntTSL 5 BASIC26.79■■□□□ 1.88
Ybx1P62960 Dut-202ENSMUST00000082122 1020 ntTSL 1 (best) BASIC26.79■■□□□ 1.88
Ybx1P62960 C2cd4d-201ENSMUST00000169433 1321 ntAPPRIS P1 TSL 3 BASIC26.78■■□□□ 1.88
Ybx1P62960 Tnfsf12-202ENSMUST00000181810 1435 ntAPPRIS P1 TSL 1 (best) BASIC26.78■■□□□ 1.88
Ybx1P62960 Tprgl-201ENSMUST00000030896 1724 ntAPPRIS P1 TSL 1 (best) BASIC26.78■■□□□ 1.88
Ybx1P62960 Spg7-201ENSMUST00000108868 845 ntTSL 2 BASIC26.76■■□□□ 1.87
Ybx1P62960 Mxra7-202ENSMUST00000047715 757 ntAPPRIS ALT2 TSL 1 (best) BASIC26.76■■□□□ 1.87
Ybx1P62960 Ssbp3-203ENSMUST00000097934 1742 ntAPPRIS ALT2 TSL 5 BASIC26.76■■□□□ 1.87
Ybx1P62960 Vsig8-202ENSMUST00000177086 1519 ntTSL 1 (best) BASIC26.75■■□□□ 1.87
Ybx1P62960 Orai1-201ENSMUST00000051016 1482 ntAPPRIS P1 TSL 1 (best) BASIC26.74■■□□□ 1.87
Ybx1P62960 March2-205ENSMUST00000173015 1418 ntTSL 3 BASIC26.74■■□□□ 1.87
Ybx1P62960 Gm20503-201ENSMUST00000174664 1294 ntAPPRIS P1 TSL 5 BASIC26.74■■□□□ 1.87
Ybx1P62960 Rpia-201ENSMUST00000066134 1829 ntAPPRIS P1 TSL 1 (best) BASIC26.74■■□□□ 1.87
Ybx1P62960 Gng13-201ENSMUST00000115108 347 ntAPPRIS P1 TSL 1 (best) BASIC26.71■■□□□ 1.87
Ybx1P62960 1810026B05Rik-206ENSMUST00000187421 519 ntTSL 3 BASIC26.68■■□□□ 1.86
Ybx1P62960 E330040D14Rik-201ENSMUST00000192299 1374 ntBASIC26.68■■□□□ 1.86
Ybx1P62960 C1qtnf5-201ENSMUST00000114815 1215 ntAPPRIS P1 TSL 1 (best) BASIC26.67■■□□□ 1.86
Ybx1P62960 Ldb1-207ENSMUST00000156585 2014 ntTSL 1 (best) BASIC26.66■■□□□ 1.86
Ybx1P62960 Mocs3-201ENSMUST00000099071 1973 ntAPPRIS P1 BASIC26.66■■□□□ 1.86
Ybx1P62960 1810026B05Rik-202ENSMUST00000184554 782 ntTSL 3 BASIC26.65■■□□□ 1.86
Ybx1P62960 Azin2-201ENSMUST00000030581 2063 ntAPPRIS P1 TSL 1 (best) BASIC26.62■■□□□ 1.85
Ybx1P62960 Pradc1-202ENSMUST00000113770 610 ntTSL 1 (best) BASIC26.62■■□□□ 1.85
Ybx1P62960 A330023F24Rik-201ENSMUST00000181226 955 ntTSL 1 (best) BASIC26.62■■□□□ 1.85
Ybx1P62960 Fndc10-201ENSMUST00000099265 2140 ntAPPRIS P1 BASIC26.62■■□□□ 1.85
Ybx1P62960 Ranbp1-202ENSMUST00000115645 1085 ntAPPRIS P1 TSL 1 (best) BASIC26.6■■□□□ 1.85
Ybx1P62960 Tnfsfm13-202ENSMUST00000174159 1470 ntAPPRIS ALT2 TSL 2 BASIC26.58■■□□□ 1.85
Ybx1P62960 Stard3nl-210ENSMUST00000222869 1030 ntTSL 5 BASIC26.58■■□□□ 1.85
Ybx1P62960 Frs3-201ENSMUST00000113296 2144 ntAPPRIS P1 TSL 1 (best) BASIC26.57■■□□□ 1.84
Ybx1P62960 Ubl4a-207ENSMUST00000178691 1038 ntAPPRIS P1 TSL 2 BASIC26.57■■□□□ 1.84
Ybx1P62960 Cetn4-202ENSMUST00000075537 762 ntTSL 3 BASIC26.57■■□□□ 1.84
Ybx1P62960 Bok-201ENSMUST00000027499 1468 ntAPPRIS P1 TSL 1 (best) BASIC26.55■■□□□ 1.84
Ybx1P62960 Rbfox2-201ENSMUST00000048145 1720 ntTSL 1 (best) BASIC26.54■■□□□ 1.84
Retrieved 100 of 76,532 protein–RNA pairs in 15.7 ms