Protein–RNA interactions for Protein: P54823

Ddx6, Probable ATP-dependent RNA helicase DDX6, mousemouse

Known RBP Predictions only

Length 483 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ddx6P54823 Slc25a28-201ENSMUST00000046038 1514 ntAPPRIS P1 TSL 1 (best) BASIC27.35■■□□□ 1.97
Ddx6P54823 Epcam-201ENSMUST00000053577 2040 ntAPPRIS P1 TSL 5 BASIC27.34■■□□□ 1.97
Ddx6P54823 Sh3glb2-203ENSMUST00000113620 1694 ntTSL 1 (best) BASIC27.34■■□□□ 1.97
Ddx6P54823 Dapk3-209ENSMUST00000219850 1482 ntAPPRIS P1 TSL 1 (best) BASIC27.3■■□□□ 1.96
Ddx6P54823 Gm42517-201ENSMUST00000197216 1850 ntAPPRIS P1 BASIC27.29■■□□□ 1.96
Ddx6P54823 Syt7-201ENSMUST00000073899 1605 ntAPPRIS P1 TSL 1 (best) BASIC27.27■■□□□ 1.96
Ddx6P54823 Ldb1-208ENSMUST00000185355 2088 ntTSL 1 (best) BASIC27.26■■□□□ 1.95
Ddx6P54823 Fam60a-203ENSMUST00000111562 906 ntAPPRIS P1 TSL 3 BASIC27.25■■□□□ 1.95
Ddx6P54823 Eif2ak3-204ENSMUST00000162950 927 ntTSL 1 (best) BASIC27.24■■□□□ 1.95
Ddx6P54823 Crlf1-201ENSMUST00000008032 1644 ntAPPRIS P1 TSL 1 (best) BASIC27.2■■□□□ 1.95
Ddx6P54823 Gm5601-202ENSMUST00000207161 1437 ntTSL 1 (best) BASIC27.2■■□□□ 1.94
Ddx6P54823 Egln2-201ENSMUST00000080058 2107 ntAPPRIS P1 TSL 1 (best) BASIC27.2■■□□□ 1.94
Ddx6P54823 Kcnmb4os2-201ENSMUST00000080943 1571 ntTSL 5 BASIC27.19■■□□□ 1.94
Ddx6P54823 Gm266-201ENSMUST00000010673 1215 ntAPPRIS P1 BASIC27.19■■□□□ 1.94
Ddx6P54823 Tdp2-203ENSMUST00000223804 1136 ntBASIC27.19■■□□□ 1.94
Ddx6P54823 Fcho2-203ENSMUST00000109403 1523 ntTSL 5 BASIC27.19■■□□□ 1.94
Ddx6P54823 Rpia-201ENSMUST00000066134 1829 ntAPPRIS P1 TSL 1 (best) BASIC27.18■■□□□ 1.94
Ddx6P54823 Lactb-202ENSMUST00000215172 1806 ntTSL 1 (best) BASIC27.16■■□□□ 1.94
Ddx6P54823 Ccdc122-202ENSMUST00000095625 1195 ntAPPRIS ALT2 TSL 1 (best) BASIC27.16■■□□□ 1.94
Ddx6P54823 CT030161.2-201ENSMUST00000218666 735 ntTSL 3 BASIC27.15■■□□□ 1.94
Ddx6P54823 Calm3-201ENSMUST00000019514 2290 ntAPPRIS P1 TSL 1 (best) BASIC27.15■■□□□ 1.94
Ddx6P54823 Abhd17a-201ENSMUST00000003436 1468 ntAPPRIS P1 TSL 1 (best) BASIC27.13■■□□□ 1.93
Ddx6P54823 A530058N18Rik-201ENSMUST00000128469 646 ntTSL 2 BASIC27.13■■□□□ 1.93
Ddx6P54823 Tprgl-201ENSMUST00000030896 1724 ntAPPRIS P1 TSL 1 (best) BASIC27.1■■□□□ 1.93
Ddx6P54823 Gm10762-201ENSMUST00000099385 1133 ntAPPRIS P1 BASIC27.1■■□□□ 1.93
Ddx6P54823 Gnai2-201ENSMUST00000055704 2215 ntAPPRIS P1 TSL 1 (best) BASIC27.09■■□□□ 1.93
Ddx6P54823 1700016A09Rik-201ENSMUST00000192004 835 ntBASIC27.06■■□□□ 1.92
Ddx6P54823 Gtf2a2-203ENSMUST00000119413 1034 ntAPPRIS P1 TSL 1 (best) BASIC27.05■■□□□ 1.92
Ddx6P54823 Trp53rkb-202ENSMUST00000065753 1375 ntTSL 1 (best) BASIC27.04■■□□□ 1.92
Ddx6P54823 Tmeff1-202ENSMUST00000123476 1224 ntAPPRIS P1 TSL 1 (best) BASIC27.03■■□□□ 1.92
Ddx6P54823 Rpl19-ps4-201ENSMUST00000167150 625 ntBASIC27.02■■□□□ 1.92
Ddx6P54823 Dhrs13-203ENSMUST00000122342 1791 ntTSL 1 (best) BASIC26.99■■□□□ 1.91
Ddx6P54823 A530058N18Rik-207ENSMUST00000152254 1211 ntTSL 1 (best) BASIC26.97■■□□□ 1.91
Ddx6P54823 Ldb1-207ENSMUST00000156585 2014 ntTSL 1 (best) BASIC26.97■■□□□ 1.91
Ddx6P54823 Tnfsf12-202ENSMUST00000181810 1435 ntAPPRIS P1 TSL 1 (best) BASIC26.96■■□□□ 1.91
Ddx6P54823 1190005I06Rik-201ENSMUST00000123927 844 ntAPPRIS P2 TSL 1 (best) BASIC26.91■■□□□ 1.9
Ddx6P54823 Azin2-201ENSMUST00000030581 2063 ntAPPRIS P1 TSL 1 (best) BASIC26.91■■□□□ 1.9
Ddx6P54823 Hoxa13-201ENSMUST00000047993 1309 ntAPPRIS ALT2 TSL 5 BASIC26.9■■□□□ 1.9
Ddx6P54823 Pradc1-201ENSMUST00000032080 1038 ntAPPRIS P1 TSL 1 (best) BASIC26.88■■□□□ 1.89
Ddx6P54823 E330040D14Rik-201ENSMUST00000192299 1374 ntBASIC26.86■■□□□ 1.89
Ddx6P54823 Ube2ql1-201ENSMUST00000065118 2674 ntAPPRIS P1 TSL 1 (best) BASIC26.86■■□□□ 1.89
Ddx6P54823 Aard-201ENSMUST00000090025 1348 ntAPPRIS P1 TSL 1 (best) BASIC26.86■■□□□ 1.89
Ddx6P54823 Lsm4-204ENSMUST00000210071 575 ntTSL 5 BASIC26.84■■□□□ 1.89
Ddx6P54823 Gm45855-201ENSMUST00000212546 880 ntBASIC26.83■■□□□ 1.89
Ddx6P54823 Gm527-203ENSMUST00000220993 1090 ntTSL 5 BASIC26.83■■□□□ 1.89
Ddx6P54823 Ssbp3-203ENSMUST00000097934 1742 ntAPPRIS ALT2 TSL 5 BASIC26.82■■□□□ 1.88
Ddx6P54823 Ubl4a-207ENSMUST00000178691 1038 ntAPPRIS P1 TSL 2 BASIC26.82■■□□□ 1.88
Ddx6P54823 Mocs3-201ENSMUST00000099071 1973 ntAPPRIS P1 BASIC26.82■■□□□ 1.88
Ddx6P54823 Macrod2-205ENSMUST00000110063 845 ntTSL 5 BASIC26.81■■□□□ 1.88
Ddx6P54823 Nrtn-201ENSMUST00000044752 1023 ntAPPRIS P1 TSL 1 (best) BASIC26.81■■□□□ 1.88
Ddx6P54823 Fam241a-202ENSMUST00000199273 2234 ntAPPRIS P1 TSL 1 (best) BASIC26.81■■□□□ 1.88
Ddx6P54823 Vsig8-202ENSMUST00000177086 1519 ntTSL 1 (best) BASIC26.8■■□□□ 1.88
Ddx6P54823 Tnfsfm13-202ENSMUST00000174159 1470 ntAPPRIS ALT2 TSL 2 BASIC26.8■■□□□ 1.88
Ddx6P54823 Fbxo6-201ENSMUST00000030858 1346 ntAPPRIS P1 TSL 1 (best) BASIC26.77■■□□□ 1.88
Ddx6P54823 Ranbp1-202ENSMUST00000115645 1085 ntAPPRIS P1 TSL 1 (best) BASIC26.76■■□□□ 1.87
Ddx6P54823 Wsb2-201ENSMUST00000031309 2421 ntAPPRIS P2 TSL 1 (best) BASIC26.76■■□□□ 1.87
Ddx6P54823 Ube2f-202ENSMUST00000171112 1547 ntAPPRIS P1 TSL 1 (best) BASIC26.75■■□□□ 1.87
Ddx6P54823 Cdk2ap1-201ENSMUST00000031341 1315 ntAPPRIS P2 TSL 1 (best) BASIC26.74■■□□□ 1.87
Ddx6P54823 Cds2-203ENSMUST00000110158 1247 ntTSL 1 (best) BASIC26.74■■□□□ 1.87
Ddx6P54823 Orai1-201ENSMUST00000051016 1482 ntAPPRIS P1 TSL 1 (best) BASIC26.74■■□□□ 1.87
Ddx6P54823 Dtnbp1-201ENSMUST00000072329 1362 ntAPPRIS P2 TSL 1 (best) BASIC26.73■■□□□ 1.87
Ddx6P54823 Gm9397-201ENSMUST00000200125 605 ntBASIC26.73■■□□□ 1.87
Ddx6P54823 1110008F13Rik-201ENSMUST00000029165 1045 ntAPPRIS P1 TSL 1 (best) BASIC26.73■■□□□ 1.87
Ddx6P54823 Tnfsfm13-201ENSMUST00000108649 1049 ntAPPRIS ALT2 TSL 5 BASIC26.72■■□□□ 1.87
Ddx6P54823 Dedd-201ENSMUST00000064950 1618 ntAPPRIS P1 TSL 1 (best) BASIC26.72■■□□□ 1.87
Ddx6P54823 Gkap1-201ENSMUST00000091579 1523 ntAPPRIS P1 TSL 1 (best) BASIC26.71■■□□□ 1.87
Ddx6P54823 Frs3-201ENSMUST00000113296 2144 ntAPPRIS P1 TSL 1 (best) BASIC26.71■■□□□ 1.87
Ddx6P54823 Pwwp2a-202ENSMUST00000094294 1814 ntTSL 5 BASIC26.68■■□□□ 1.86
Ddx6P54823 AC150314.2-201ENSMUST00000214135 834 ntTSL 5 BASIC26.68■■□□□ 1.86
Ddx6P54823 Capns1-201ENSMUST00000001845 1600 ntAPPRIS P2 TSL 5 BASIC26.68■■□□□ 1.86
Ddx6P54823 Fndc10-201ENSMUST00000099265 2140 ntAPPRIS P1 BASIC26.68■■□□□ 1.86
Ddx6P54823 Raly-203ENSMUST00000109701 1709 ntAPPRIS P3 TSL 1 (best) BASIC26.68■■□□□ 1.86
Ddx6P54823 E2f4-201ENSMUST00000015003 1993 ntAPPRIS P1 TSL 1 (best) BASIC26.67■■□□□ 1.86
Ddx6P54823 Orai1-202ENSMUST00000121652 1875 ntAPPRIS P1 TSL 1 (best) BASIC26.66■■□□□ 1.86
Ddx6P54823 Rbfox2-201ENSMUST00000048145 1720 ntTSL 1 (best) BASIC26.66■■□□□ 1.86
Ddx6P54823 Bok-201ENSMUST00000027499 1468 ntAPPRIS P1 TSL 1 (best) BASIC26.64■■□□□ 1.86
Ddx6P54823 BC037032-205ENSMUST00000187080 508 ntTSL 5 BASIC26.63■■□□□ 1.85
Ddx6P54823 Smarcc2-205ENSMUST00000218228 603 ntTSL 5 BASIC26.62■■□□□ 1.85
Ddx6P54823 March2-205ENSMUST00000173015 1418 ntTSL 3 BASIC26.62■■□□□ 1.85
Ddx6P54823 Prelid3b-201ENSMUST00000016401 1553 ntAPPRIS P1 TSL 1 (best) BASIC26.62■■□□□ 1.85
Ddx6P54823 Qrich1-209ENSMUST00000194385 975 ntTSL 2 BASIC26.6■■□□□ 1.85
Ddx6P54823 Mthfd2l-203ENSMUST00000202781 688 ntTSL 1 (best) BASIC26.58■■□□□ 1.85
Ddx6P54823 Sept11-208ENSMUST00000202308 1792 ntAPPRIS ALT1 TSL 5 BASIC26.56■■□□□ 1.84
Ddx6P54823 Lmo2-201ENSMUST00000111139 1434 ntTSL 5 BASIC26.56■■□□□ 1.84
Ddx6P54823 Mapk3-202ENSMUST00000057669 1800 ntAPPRIS P2 TSL 1 (best) BASIC26.55■■□□□ 1.84
Ddx6P54823 Sowahd-201ENSMUST00000060057 1574 ntAPPRIS P1 BASIC26.55■■□□□ 1.84
Ddx6P54823 Bok-205ENSMUST00000201863 883 ntAPPRIS P1 TSL 5 BASIC26.55■■□□□ 1.84
Ddx6P54823 1810026B05Rik-202ENSMUST00000184554 782 ntTSL 3 BASIC26.53■■□□□ 1.84
Ddx6P54823 Rnd2-201ENSMUST00000001347 1394 ntAPPRIS P1 TSL 1 (best) BASIC26.52■■□□□ 1.84
Ddx6P54823 Ube2m-201ENSMUST00000005714 1472 ntAPPRIS P1 TSL 1 (best) BASIC26.52■■□□□ 1.84
Ddx6P54823 Crip2-201ENSMUST00000084882 1439 ntAPPRIS P1 TSL 1 (best) BASIC26.51■■□□□ 1.83
Ddx6P54823 Tcfl5-201ENSMUST00000037877 2225 ntAPPRIS P1 TSL 1 (best) BASIC26.5■■□□□ 1.83
Ddx6P54823 Hrh3-208ENSMUST00000171736 906 ntTSL 5 BASIC26.5■■□□□ 1.83
Ddx6P54823 Dut-202ENSMUST00000082122 1020 ntTSL 1 (best) BASIC26.5■■□□□ 1.83
Ddx6P54823 Gltp-201ENSMUST00000012028 1762 ntAPPRIS P1 TSL 1 (best) BASIC26.49■■□□□ 1.83
Ddx6P54823 4932443I19Rik-201ENSMUST00000166277 799 ntAPPRIS P2 TSL 1 (best) BASIC26.49■■□□□ 1.83
Ddx6P54823 6530409C15Rik-202ENSMUST00000143551 1573 ntTSL 1 (best) BASIC26.49■■□□□ 1.83
Ddx6P54823 C2cd4d-201ENSMUST00000169433 1321 ntAPPRIS P1 TSL 3 BASIC26.48■■□□□ 1.83
Ddx6P54823 Gm20503-201ENSMUST00000174664 1294 ntAPPRIS P1 TSL 5 BASIC26.48■■□□□ 1.83
Ddx6P54823 Gm24970-201ENSMUST00000175582 82 ntBASIC26.48■■□□□ 1.83
Retrieved 100 of 76,532 protein–RNA pairs in 20.1 ms