Protein–RNA interactions for Protein: P48754

Brca1, Breast cancer type 1 susceptibility protein homolog, mousemouse

Predictions only

Length 1,812 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Brca1P48754 Peli2-204ENSMUST00000226513 1320 ntBASIC31.02■■■□□ 2.56
Brca1P48754 Pradc1-202ENSMUST00000113770 610 ntTSL 1 (best) BASIC31.01■■■□□ 2.56
Brca1P48754 Btf3-201ENSMUST00000022163 1091 ntTSL 1 (best) BASIC31.01■■■□□ 2.56
Brca1P48754 Gm45855-201ENSMUST00000212546 880 ntBASIC31.01■■■□□ 2.55
Brca1P48754 Cgref1-201ENSMUST00000031051 1442 ntAPPRIS P1 TSL 1 (best) BASIC31■■■□□ 2.55
Brca1P48754 Lrrc1-204ENSMUST00000183734 2113 ntTSL 1 (best) BASIC30.98■■■□□ 2.55
Brca1P48754 Pkdcc-204ENSMUST00000170794 2446 ntAPPRIS P1 TSL 1 (best) BASIC30.97■■■□□ 2.55
Brca1P48754 Cdk2ap1-201ENSMUST00000031341 1315 ntAPPRIS P2 TSL 1 (best) BASIC30.96■■■□□ 2.55
Brca1P48754 Cds2-203ENSMUST00000110158 1247 ntTSL 1 (best) BASIC30.96■■■□□ 2.55
Brca1P48754 Cenpv-201ENSMUST00000018653 1032 ntAPPRIS P1 TSL 1 (best) BASIC30.96■■■□□ 2.55
Brca1P48754 1700016A09Rik-201ENSMUST00000192004 835 ntBASIC30.96■■■□□ 2.55
Brca1P48754 2810459M11Rik-201ENSMUST00000027429 1225 ntAPPRIS ALT2 TSL 1 (best) BASIC30.94■■■□□ 2.54
Brca1P48754 9230104M06Rik-201ENSMUST00000180971 1963 ntBASIC30.94■■■□□ 2.54
Brca1P48754 Mkrn1-202ENSMUST00000051671 1511 ntTSL 1 (best) BASIC30.89■■■□□ 2.54
Brca1P48754 Tmeff1-202ENSMUST00000123476 1224 ntAPPRIS P1 TSL 1 (best) BASIC30.89■■■□□ 2.53
Brca1P48754 Ube2e2-205ENSMUST00000150727 1523 ntAPPRIS P1 TSL 1 (best) BASIC30.88■■■□□ 2.53
Brca1P48754 Gm5601-202ENSMUST00000207161 1437 ntTSL 1 (best) BASIC30.88■■■□□ 2.53
Brca1P48754 Zic2-201ENSMUST00000075888 2440 ntAPPRIS P1 TSL 1 (best) BASIC30.86■■■□□ 2.53
Brca1P48754 1110008F13Rik-201ENSMUST00000029165 1045 ntAPPRIS P1 TSL 1 (best) BASIC30.84■■■□□ 2.53
Brca1P48754 Hoxa13-201ENSMUST00000047993 1309 ntAPPRIS ALT2 TSL 5 BASIC30.83■■■□□ 2.53
Brca1P48754 Shf-201ENSMUST00000048635 1431 ntAPPRIS P2 TSL 1 (best) BASIC30.83■■■□□ 2.53
Brca1P48754 Mthfd2l-203ENSMUST00000202781 688 ntTSL 1 (best) BASIC30.82■■■□□ 2.52
Brca1P48754 Mipep-204ENSMUST00000225043 1548 ntBASIC30.81■■■□□ 2.52
Brca1P48754 Ccm2l-201ENSMUST00000109800 2158 ntAPPRIS P1 TSL 5 BASIC30.81■■■□□ 2.52
Brca1P48754 Gm5987-201ENSMUST00000196433 1151 ntBASIC30.77■■■□□ 2.52
Brca1P48754 Gm9397-201ENSMUST00000200125 605 ntBASIC30.77■■■□□ 2.52
Brca1P48754 Ube2q2-202ENSMUST00000121677 1680 ntAPPRIS ALT2 TSL 5 BASIC30.76■■■□□ 2.52
Brca1P48754 Gm42517-201ENSMUST00000197216 1850 ntAPPRIS P1 BASIC30.76■■■□□ 2.51
Brca1P48754 Tmem259-201ENSMUST00000052885 2225 ntAPPRIS P1 TSL 1 (best) BASIC30.74■■■□□ 2.51
Brca1P48754 Ppp1r14b-201ENSMUST00000070850 919 ntAPPRIS P1 TSL 1 (best) BASIC30.73■■■□□ 2.51
Brca1P48754 Abhd17a-201ENSMUST00000003436 1468 ntAPPRIS P1 TSL 1 (best) BASIC30.71■■■□□ 2.51
Brca1P48754 Dut-202ENSMUST00000082122 1020 ntTSL 1 (best) BASIC30.7■■■□□ 2.5
Brca1P48754 Gng13-201ENSMUST00000115108 347 ntAPPRIS P1 TSL 1 (best) BASIC30.69■■■□□ 2.5
Brca1P48754 Aard-201ENSMUST00000090025 1348 ntAPPRIS P1 TSL 1 (best) BASIC30.66■■■□□ 2.5
Brca1P48754 Casp9-202ENSMUST00000097805 1498 ntTSL 1 (best) BASIC30.66■■■□□ 2.5
Brca1P48754 Kcnmb4os2-201ENSMUST00000080943 1571 ntTSL 5 BASIC30.65■■■□□ 2.5
Brca1P48754 AC158592.1-201ENSMUST00000215560 1113 ntTSL 5 BASIC30.65■■■□□ 2.5
Brca1P48754 Capns1-201ENSMUST00000001845 1600 ntAPPRIS P2 TSL 5 BASIC30.65■■■□□ 2.5
Brca1P48754 Spg7-201ENSMUST00000108868 845 ntTSL 2 BASIC30.61■■■□□ 2.49
Brca1P48754 Gm2018-201ENSMUST00000140754 478 ntTSL 2 BASIC30.61■■■□□ 2.49
Brca1P48754 Qrich1-209ENSMUST00000194385 975 ntTSL 2 BASIC30.6■■■□□ 2.49
Brca1P48754 A330023F24Rik-201ENSMUST00000181226 955 ntTSL 1 (best) BASIC30.59■■■□□ 2.49
Brca1P48754 Mxra7-202ENSMUST00000047715 757 ntAPPRIS ALT2 TSL 1 (best) BASIC30.59■■■□□ 2.49
Brca1P48754 Atp1b3-201ENSMUST00000034983 1994 ntAPPRIS P1 TSL 1 (best) BASIC30.59■■■□□ 2.49
Brca1P48754 Crlf1-201ENSMUST00000008032 1644 ntAPPRIS P1 TSL 1 (best) BASIC30.59■■■□□ 2.49
Brca1P48754 Trp53rkb-202ENSMUST00000065753 1375 ntTSL 1 (best) BASIC30.58■■■□□ 2.49
Brca1P48754 Evx2-202ENSMUST00000173623 1428 ntAPPRIS P2 TSL 1 (best) BASIC30.57■■■□□ 2.48
Brca1P48754 C1qtnf5-201ENSMUST00000114815 1215 ntAPPRIS P1 TSL 1 (best) BASIC30.57■■■□□ 2.48
Brca1P48754 Gm20503-201ENSMUST00000174664 1294 ntAPPRIS P1 TSL 5 BASIC30.57■■■□□ 2.48
Brca1P48754 C2cd4d-201ENSMUST00000169433 1321 ntAPPRIS P1 TSL 3 BASIC30.56■■■□□ 2.48
Brca1P48754 Dedd-201ENSMUST00000064950 1618 ntAPPRIS P1 TSL 1 (best) BASIC30.53■■■□□ 2.48
Brca1P48754 Gm29254-202ENSMUST00000189302 883 ntTSL 1 (best) BASIC30.52■■■□□ 2.48
Brca1P48754 Cadm4-201ENSMUST00000068023 2161 ntAPPRIS P1 TSL 1 (best) BASIC30.51■■■□□ 2.47
Brca1P48754 Crip2-201ENSMUST00000084882 1439 ntAPPRIS P1 TSL 1 (best) BASIC30.51■■■□□ 2.47
Brca1P48754 Orai1-201ENSMUST00000051016 1482 ntAPPRIS P1 TSL 1 (best) BASIC30.51■■■□□ 2.47
Brca1P48754 A530058N18Rik-207ENSMUST00000152254 1211 ntTSL 1 (best) BASIC30.5■■■□□ 2.47
Brca1P48754 AY074887-201ENSMUST00000054018 769 ntAPPRIS P1 BASIC30.5■■■□□ 2.47
Brca1P48754 Dapk3-209ENSMUST00000219850 1482 ntAPPRIS P1 TSL 1 (best) BASIC30.5■■■□□ 2.47
Brca1P48754 Syt7-201ENSMUST00000073899 1605 ntAPPRIS P1 TSL 1 (best) BASIC30.47■■■□□ 2.47
Brca1P48754 Rnf215-201ENSMUST00000003677 1874 ntAPPRIS P1 TSL 1 (best) BASIC30.46■■■□□ 2.47
Brca1P48754 1810026B05Rik-202ENSMUST00000184554 782 ntTSL 3 BASIC30.46■■■□□ 2.47
Brca1P48754 Cib1-201ENSMUST00000065163 1047 ntAPPRIS P1 TSL 1 (best) BASIC30.46■■■□□ 2.47
Brca1P48754 BC037032-205ENSMUST00000187080 508 ntTSL 5 BASIC30.45■■■□□ 2.47
Brca1P48754 Fbxo6-201ENSMUST00000030858 1346 ntAPPRIS P1 TSL 1 (best) BASIC30.43■■■□□ 2.46
Brca1P48754 Cetn4-202ENSMUST00000075537 762 ntTSL 3 BASIC30.43■■■□□ 2.46
Brca1P48754 Foxd3-201ENSMUST00000087285 2324 ntAPPRIS P1 BASIC30.42■■■□□ 2.46
Brca1P48754 March2-205ENSMUST00000173015 1418 ntTSL 3 BASIC30.4■■■□□ 2.46
Brca1P48754 Lactb-202ENSMUST00000215172 1806 ntTSL 1 (best) BASIC30.4■■■□□ 2.46
Brca1P48754 Emx1-201ENSMUST00000045942 1561 ntAPPRIS P1 TSL 1 (best) BASIC30.39■■■□□ 2.46
Brca1P48754 Vsig8-202ENSMUST00000177086 1519 ntTSL 1 (best) BASIC30.38■■■□□ 2.45
Brca1P48754 Tsen34-203ENSMUST00000108629 1238 ntTSL 1 (best) BASIC30.38■■■□□ 2.45
Brca1P48754 Bcl7c-207ENSMUST00000207019 654 ntTSL 3 BASIC30.37■■■□□ 2.45
Brca1P48754 Dhrs13-203ENSMUST00000122342 1791 ntTSL 1 (best) BASIC30.33■■■□□ 2.45
Brca1P48754 Sept3-202ENSMUST00000116423 2467 ntAPPRIS P1 TSL 1 (best) BASIC30.3■■■□□ 2.44
Brca1P48754 Gm24970-201ENSMUST00000175582 82 ntBASIC30.25■■■□□ 2.43
Brca1P48754 1810026B05Rik-206ENSMUST00000187421 519 ntTSL 3 BASIC30.24■■■□□ 2.43
Brca1P48754 Zfyve21-201ENSMUST00000021714 1308 ntAPPRIS P2 TSL 1 (best) BASIC30.24■■■□□ 2.43
Brca1P48754 Tnfsf12-202ENSMUST00000181810 1435 ntAPPRIS P1 TSL 1 (best) BASIC30.22■■■□□ 2.43
Brca1P48754 Fcho2-203ENSMUST00000109403 1523 ntTSL 5 BASIC30.22■■■□□ 2.43
Brca1P48754 Macrod2-205ENSMUST00000110063 845 ntTSL 5 BASIC30.2■■■□□ 2.43
Brca1P48754 Gm17110-201ENSMUST00000171248 735 ntTSL 3 BASIC30.2■■■□□ 2.43
Brca1P48754 Gm8503-201ENSMUST00000118131 455 ntBASIC30.19■■■□□ 2.42
Brca1P48754 Egln2-201ENSMUST00000080058 2107 ntAPPRIS P1 TSL 1 (best) BASIC30.19■■■□□ 2.42
Brca1P48754 Stard3nl-210ENSMUST00000222869 1030 ntTSL 5 BASIC30.18■■■□□ 2.42
Brca1P48754 4930542C12Rik-201ENSMUST00000171096 1203 ntBASIC30.17■■■□□ 2.42
Brca1P48754 Gm12523-201ENSMUST00000148844 599 ntTSL 5 BASIC30.16■■■□□ 2.42
Brca1P48754 Ube2f-202ENSMUST00000171112 1547 ntAPPRIS P1 TSL 1 (best) BASIC30.15■■■□□ 2.42
Brca1P48754 Gnai2-201ENSMUST00000055704 2215 ntAPPRIS P1 TSL 1 (best) BASIC30.14■■■□□ 2.42
Brca1P48754 Stradb-202ENSMUST00000114296 1348 ntTSL 1 (best) BASIC30.12■■■□□ 2.41
Brca1P48754 Gm9939-201ENSMUST00000067161 1154 ntBASIC30.11■■■□□ 2.41
Brca1P48754 Tnfsfm13-202ENSMUST00000174159 1470 ntAPPRIS ALT2 TSL 2 BASIC30.09■■■□□ 2.41
Brca1P48754 Dlx6os2-201ENSMUST00000178206 1354 ntBASIC30.08■■■□□ 2.41
Brca1P48754 Uba52-207ENSMUST00000140679 697 ntAPPRIS P1 TSL 2 BASIC30.07■■■□□ 2.4
Brca1P48754 Ubl4a-207ENSMUST00000178691 1038 ntAPPRIS P1 TSL 2 BASIC30.07■■■□□ 2.4
Brca1P48754 Ldb1-208ENSMUST00000185355 2088 ntTSL 1 (best) BASIC30.07■■■□□ 2.4
Brca1P48754 Tprgl-201ENSMUST00000030896 1724 ntAPPRIS P1 TSL 1 (best) BASIC30.06■■■□□ 2.4
Brca1P48754 Ssbp3-203ENSMUST00000097934 1742 ntAPPRIS ALT2 TSL 5 BASIC30.06■■■□□ 2.4
Brca1P48754 Naa20-201ENSMUST00000002805 1172 ntTSL 1 (best) BASIC30.06■■■□□ 2.4
Brca1P48754 Scx-201ENSMUST00000043089 1136 ntAPPRIS P1 TSL 1 (best) BASIC30.03■■■□□ 2.4
Brca1P48754 Macrod1-201ENSMUST00000040261 1274 ntAPPRIS P1 TSL 1 (best) BASIC30.01■■■□□ 2.39
Retrieved 100 of 76,532 protein–RNA pairs in 14.3 ms