Protein–RNA interactions for Protein: P41233

Abca1, ATP-binding cassette sub-family A member 1, mousemouse

Predictions only

Length 2,261 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Abca1P41233 Ccdc122-202ENSMUST00000095625 1195 ntAPPRIS ALT2 TSL 1 (best) BASIC21.86■■□□□ 1.09
Abca1P41233 Smarcc2-205ENSMUST00000218228 603 ntTSL 5 BASIC21.85■■□□□ 1.09
Abca1P41233 Rab22a-202ENSMUST00000109110 849 ntTSL 5 BASIC21.83■■□□□ 1.09
Abca1P41233 Btf3-201ENSMUST00000022163 1091 ntTSL 1 (best) BASIC21.8■■□□□ 1.08
Abca1P41233 Gm45855-201ENSMUST00000212546 880 ntBASIC21.8■■□□□ 1.08
Abca1P41233 CT030161.2-201ENSMUST00000218666 735 ntTSL 3 BASIC21.78■■□□□ 1.08
Abca1P41233 Cdk2ap1-201ENSMUST00000031341 1315 ntAPPRIS P2 TSL 1 (best) BASIC21.77■■□□□ 1.07
Abca1P41233 Tnfsfm13-201ENSMUST00000108649 1049 ntAPPRIS ALT2 TSL 5 BASIC21.76■■□□□ 1.07
Abca1P41233 Gm26566-201ENSMUST00000181601 1038 ntAPPRIS P1 BASIC21.76■■□□□ 1.07
Abca1P41233 4932443I19Rik-201ENSMUST00000166277 799 ntAPPRIS P2 TSL 1 (best) BASIC21.75■■□□□ 1.07
Abca1P41233 Dtnbp1-201ENSMUST00000072329 1362 ntAPPRIS P2 TSL 1 (best) BASIC21.74■■□□□ 1.07
Abca1P41233 Gnai2-202ENSMUST00000192615 1777 ntAPPRIS P1 TSL 1 (best) BASIC21.74■■□□□ 1.07
Abca1P41233 Msantd2-201ENSMUST00000048604 2291 ntAPPRIS P1 TSL 1 (best) BASIC21.73■■□□□ 1.07
Abca1P41233 Tcfl5-201ENSMUST00000037877 2225 ntAPPRIS P1 TSL 1 (best) BASIC21.73■■□□□ 1.07
Abca1P41233 1700016A09Rik-201ENSMUST00000192004 835 ntBASIC21.72■■□□□ 1.07
Abca1P41233 Gm42517-201ENSMUST00000197216 1850 ntAPPRIS P1 BASIC21.7■■□□□ 1.06
Abca1P41233 Pradc1-202ENSMUST00000113770 610 ntTSL 1 (best) BASIC21.69■■□□□ 1.06
Abca1P41233 Snx24-202ENSMUST00000165032 1880 ntAPPRIS P1 TSL 1 (best) BASIC21.68■■□□□ 1.06
Abca1P41233 Cds2-203ENSMUST00000110158 1247 ntTSL 1 (best) BASIC21.68■■□□□ 1.06
Abca1P41233 Tmeff1-202ENSMUST00000123476 1224 ntAPPRIS P1 TSL 1 (best) BASIC21.66■■□□□ 1.06
Abca1P41233 Gm5601-202ENSMUST00000207161 1437 ntTSL 1 (best) BASIC21.62■■□□□ 1.05
Abca1P41233 Cenpv-201ENSMUST00000018653 1032 ntAPPRIS P1 TSL 1 (best) BASIC21.6■■□□□ 1.05
Abca1P41233 Lrrc1-204ENSMUST00000183734 2113 ntTSL 1 (best) BASIC21.59■■□□□ 1.05
Abca1P41233 Kcnmb4os2-201ENSMUST00000080943 1571 ntTSL 5 BASIC21.57■■□□□ 1.04
Abca1P41233 2810459M11Rik-201ENSMUST00000027429 1225 ntAPPRIS ALT2 TSL 1 (best) BASIC21.57■■□□□ 1.04
Abca1P41233 Aard-201ENSMUST00000090025 1348 ntAPPRIS P1 TSL 1 (best) BASIC21.55■■□□□ 1.04
Abca1P41233 Epcam-201ENSMUST00000053577 2040 ntAPPRIS P1 TSL 5 BASIC21.55■■□□□ 1.04
Abca1P41233 Nemp1-202ENSMUST00000118612 1522 ntTSL 1 (best) BASIC21.55■■□□□ 1.04
Abca1P41233 1110008F13Rik-201ENSMUST00000029165 1045 ntAPPRIS P1 TSL 1 (best) BASIC21.55■■□□□ 1.04
Abca1P41233 Mthfd2l-203ENSMUST00000202781 688 ntTSL 1 (best) BASIC21.53■■□□□ 1.04
Abca1P41233 Mapkapk5-201ENSMUST00000031410 2234 ntAPPRIS P2 TSL 1 (best) BASIC21.53■■□□□ 1.04
Abca1P41233 9230104M06Rik-201ENSMUST00000180971 1963 ntBASIC21.52■■□□□ 1.04
Abca1P41233 A530058N18Rik-207ENSMUST00000152254 1211 ntTSL 1 (best) BASIC21.52■■□□□ 1.03
Abca1P41233 Capns1-201ENSMUST00000001845 1600 ntAPPRIS P2 TSL 5 BASIC21.51■■□□□ 1.03
Abca1P41233 Spg7-201ENSMUST00000108868 845 ntTSL 2 BASIC21.5■■□□□ 1.03
Abca1P41233 Dedd-201ENSMUST00000064950 1618 ntAPPRIS P1 TSL 1 (best) BASIC21.5■■□□□ 1.03
Abca1P41233 Gm9397-201ENSMUST00000200125 605 ntBASIC21.49■■□□□ 1.03
Abca1P41233 Trp53rkb-202ENSMUST00000065753 1375 ntTSL 1 (best) BASIC21.49■■□□□ 1.03
Abca1P41233 Hoxa13-201ENSMUST00000047993 1309 ntAPPRIS ALT2 TSL 5 BASIC21.48■■□□□ 1.03
Abca1P41233 Ldb1-208ENSMUST00000185355 2088 ntTSL 1 (best) BASIC21.47■■□□□ 1.03
Abca1P41233 Gm5987-201ENSMUST00000196433 1151 ntBASIC21.47■■□□□ 1.03
Abca1P41233 Ube2q2-202ENSMUST00000121677 1680 ntAPPRIS ALT2 TSL 5 BASIC21.47■■□□□ 1.03
Abca1P41233 Wsb2-201ENSMUST00000031309 2421 ntAPPRIS P2 TSL 1 (best) BASIC21.46■■□□□ 1.03
Abca1P41233 Mipep-204ENSMUST00000225043 1548 ntBASIC21.46■■□□□ 1.03
Abca1P41233 Mxra7-202ENSMUST00000047715 757 ntAPPRIS ALT2 TSL 1 (best) BASIC21.46■■□□□ 1.03
Abca1P41233 C2cd4d-201ENSMUST00000169433 1321 ntAPPRIS P1 TSL 3 BASIC21.46■■□□□ 1.03
Abca1P41233 Crip2-201ENSMUST00000084882 1439 ntAPPRIS P1 TSL 1 (best) BASIC21.45■■□□□ 1.02
Abca1P41233 Crlf1-201ENSMUST00000008032 1644 ntAPPRIS P1 TSL 1 (best) BASIC21.45■■□□□ 1.02
Abca1P41233 1810026B05Rik-202ENSMUST00000184554 782 ntTSL 3 BASIC21.44■■□□□ 1.02
Abca1P41233 Dut-202ENSMUST00000082122 1020 ntTSL 1 (best) BASIC21.44■■□□□ 1.02
Abca1P41233 Syt7-201ENSMUST00000073899 1605 ntAPPRIS P1 TSL 1 (best) BASIC21.44■■□□□ 1.02
Abca1P41233 Gng13-201ENSMUST00000115108 347 ntAPPRIS P1 TSL 1 (best) BASIC21.44■■□□□ 1.02
Abca1P41233 A330023F24Rik-201ENSMUST00000181226 955 ntTSL 1 (best) BASIC21.44■■□□□ 1.02
Abca1P41233 Abhd17a-201ENSMUST00000003436 1468 ntAPPRIS P1 TSL 1 (best) BASIC21.44■■□□□ 1.02
Abca1P41233 Shf-201ENSMUST00000048635 1431 ntAPPRIS P2 TSL 1 (best) BASIC21.44■■□□□ 1.02
Abca1P41233 Atp1b3-201ENSMUST00000034983 1994 ntAPPRIS P1 TSL 1 (best) BASIC21.43■■□□□ 1.02
Abca1P41233 C1qtnf5-201ENSMUST00000114815 1215 ntAPPRIS P1 TSL 1 (best) BASIC21.42■■□□□ 1.02
Abca1P41233 Cadm4-201ENSMUST00000068023 2161 ntAPPRIS P1 TSL 1 (best) BASIC21.42■■□□□ 1.02
Abca1P41233 Ube2e2-205ENSMUST00000150727 1523 ntAPPRIS P1 TSL 1 (best) BASIC21.41■■□□□ 1.02
Abca1P41233 Vsig8-202ENSMUST00000177086 1519 ntTSL 1 (best) BASIC21.41■■□□□ 1.02
Abca1P41233 Tsen34-203ENSMUST00000108629 1238 ntTSL 1 (best) BASIC21.41■■□□□ 1.02
Abca1P41233 Orai1-201ENSMUST00000051016 1482 ntAPPRIS P1 TSL 1 (best) BASIC21.41■■□□□ 1.02
Abca1P41233 Gm20503-201ENSMUST00000174664 1294 ntAPPRIS P1 TSL 5 BASIC21.4■■□□□ 1.02
Abca1P41233 Dapk3-209ENSMUST00000219850 1482 ntAPPRIS P1 TSL 1 (best) BASIC21.39■■□□□ 1.02
Abca1P41233 Gm2018-201ENSMUST00000140754 478 ntTSL 2 BASIC21.39■■□□□ 1.02
Abca1P41233 Cib1-201ENSMUST00000065163 1047 ntAPPRIS P1 TSL 1 (best) BASIC21.39■■□□□ 1.02
Abca1P41233 Stk24-201ENSMUST00000079817 2676 ntAPPRIS P1 TSL 1 (best) BASIC21.39■■□□□ 1.01
Abca1P41233 Fam241a-202ENSMUST00000199273 2234 ntAPPRIS P1 TSL 1 (best) BASIC21.39■■□□□ 1.01
Abca1P41233 Ppp1r14b-201ENSMUST00000070850 919 ntAPPRIS P1 TSL 1 (best) BASIC21.38■■□□□ 1.01
Abca1P41233 March2-205ENSMUST00000173015 1418 ntTSL 3 BASIC21.36■■□□□ 1.01
Abca1P41233 Qrich1-209ENSMUST00000194385 975 ntTSL 2 BASIC21.35■■□□□ 1.01
Abca1P41233 BC037032-205ENSMUST00000187080 508 ntTSL 5 BASIC21.34■■□□□ 1.01
Abca1P41233 Fbxo6-201ENSMUST00000030858 1346 ntAPPRIS P1 TSL 1 (best) BASIC21.32■■□□□ 1
Abca1P41233 Cetn4-202ENSMUST00000075537 762 ntTSL 3 BASIC21.32■■□□□ 1
Abca1P41233 Evx2-202ENSMUST00000173623 1428 ntAPPRIS P2 TSL 1 (best) BASIC21.32■■□□□ 1
Abca1P41233 AY074887-201ENSMUST00000054018 769 ntAPPRIS P1 BASIC21.3■■□□□ 1
Abca1P41233 Macrod2-205ENSMUST00000110063 845 ntTSL 5 BASIC21.29■■□□□ 1
Abca1P41233 Gnai2-201ENSMUST00000055704 2215 ntAPPRIS P1 TSL 1 (best) BASIC21.28■■□□□ 1
Abca1P41233 Casp9-202ENSMUST00000097805 1498 ntTSL 1 (best) BASIC21.26■□□□□ 0.99
Abca1P41233 Gm29254-202ENSMUST00000189302 883 ntTSL 1 (best) BASIC21.26■□□□□ 0.99
Abca1P41233 1810026B05Rik-206ENSMUST00000187421 519 ntTSL 3 BASIC21.25■□□□□ 0.99
Abca1P41233 Rnf215-201ENSMUST00000003677 1874 ntAPPRIS P1 TSL 1 (best) BASIC21.24■□□□□ 0.99
Abca1P41233 Lactb-202ENSMUST00000215172 1806 ntTSL 1 (best) BASIC21.19■□□□□ 0.98
Abca1P41233 Bcl7c-207ENSMUST00000207019 654 ntTSL 3 BASIC21.18■□□□□ 0.98
Abca1P41233 Zfyve21-201ENSMUST00000021714 1308 ntAPPRIS P2 TSL 1 (best) BASIC21.18■□□□□ 0.98
Abca1P41233 Egln2-201ENSMUST00000080058 2107 ntAPPRIS P1 TSL 1 (best) BASIC21.17■□□□□ 0.98
Abca1P41233 Gm17110-201ENSMUST00000171248 735 ntTSL 3 BASIC21.17■□□□□ 0.98
Abca1P41233 AC158592.1-201ENSMUST00000215560 1113 ntTSL 5 BASIC21.17■□□□□ 0.98
Abca1P41233 Gm12523-201ENSMUST00000148844 599 ntTSL 5 BASIC21.16■□□□□ 0.98
Abca1P41233 Gm24970-201ENSMUST00000175582 82 ntBASIC21.15■□□□□ 0.98
Abca1P41233 Dhrs13-203ENSMUST00000122342 1791 ntTSL 1 (best) BASIC21.13■□□□□ 0.97
Abca1P41233 Ldb1-207ENSMUST00000156585 2014 ntTSL 1 (best) BASIC21.13■□□□□ 0.97
Abca1P41233 Naa20-201ENSMUST00000002805 1172 ntTSL 1 (best) BASIC21.08■□□□□ 0.97
Abca1P41233 4930542C12Rik-201ENSMUST00000171096 1203 ntBASIC21.08■□□□□ 0.96
Abca1P41233 Stard3nl-210ENSMUST00000222869 1030 ntTSL 5 BASIC21.07■□□□□ 0.96
Abca1P41233 Eif5a-201ENSMUST00000043419 1437 ntAPPRIS P1 TSL 1 (best) BASIC21.07■□□□□ 0.96
Abca1P41233 Gm8503-201ENSMUST00000118131 455 ntBASIC21.06■□□□□ 0.96
Abca1P41233 E330040D14Rik-201ENSMUST00000192299 1374 ntBASIC21.06■□□□□ 0.96
Abca1P41233 Ube2f-202ENSMUST00000171112 1547 ntAPPRIS P1 TSL 1 (best) BASIC21.06■□□□□ 0.96
Abca1P41233 Tmem243-201ENSMUST00000115365 1040 ntAPPRIS P1 TSL 2 BASIC21.06■□□□□ 0.96
Retrieved 100 of 76,532 protein–RNA pairs in 32.2 ms