Protein–RNA interactions for Protein: P31240

Pdgfb, Platelet-derived growth factor subunit B, mousemouse

Predictions only

Length 241 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PdgfbP31240 Trp53i13-201ENSMUST00000060417 1463 ntAPPRIS P2 TSL 1 (best) BASIC27.57■■■□□ 2
PdgfbP31240 Pradc1-202ENSMUST00000113770 610 ntTSL 1 (best) BASIC27.53■■■□□ 2
PdgfbP31240 Zfp131-207ENSMUST00000224946 1783 ntBASIC27.49■■□□□ 1.99
PdgfbP31240 Cdk2ap1-201ENSMUST00000031341 1315 ntAPPRIS P2 TSL 1 (best) BASIC27.48■■□□□ 1.99
PdgfbP31240 Rab22a-202ENSMUST00000109110 849 ntTSL 5 BASIC27.48■■□□□ 1.99
PdgfbP31240 Gm5601-202ENSMUST00000207161 1437 ntTSL 1 (best) BASIC27.46■■□□□ 1.99
PdgfbP31240 2810459M11Rik-201ENSMUST00000027429 1225 ntAPPRIS ALT2 TSL 1 (best) BASIC27.45■■□□□ 1.98
PdgfbP31240 Cds2-203ENSMUST00000110158 1247 ntTSL 1 (best) BASIC27.44■■□□□ 1.98
PdgfbP31240 Cenpv-201ENSMUST00000018653 1032 ntAPPRIS P1 TSL 1 (best) BASIC27.44■■□□□ 1.98
PdgfbP31240 Vsig8-201ENSMUST00000061835 1801 ntAPPRIS P1 TSL 1 (best) BASIC27.42■■□□□ 1.98
PdgfbP31240 Ppp1r14b-201ENSMUST00000070850 919 ntAPPRIS P1 TSL 1 (best) BASIC27.42■■□□□ 1.98
PdgfbP31240 Hoxa13-201ENSMUST00000047993 1309 ntAPPRIS ALT2 TSL 5 BASIC27.39■■□□□ 1.97
PdgfbP31240 1110008F13Rik-201ENSMUST00000029165 1045 ntAPPRIS P1 TSL 1 (best) BASIC27.37■■□□□ 1.97
PdgfbP31240 Spg7-201ENSMUST00000108868 845 ntTSL 2 BASIC27.36■■□□□ 1.97
PdgfbP31240 Dut-202ENSMUST00000082122 1020 ntTSL 1 (best) BASIC27.35■■□□□ 1.97
PdgfbP31240 Mthfd2l-203ENSMUST00000202781 688 ntTSL 1 (best) BASIC27.34■■□□□ 1.97
PdgfbP31240 Gm9397-201ENSMUST00000200125 605 ntBASIC27.33■■□□□ 1.97
PdgfbP31240 Gm42517-201ENSMUST00000197216 1850 ntAPPRIS P1 BASIC27.32■■□□□ 1.96
PdgfbP31240 Kcnmb4os2-201ENSMUST00000080943 1571 ntTSL 5 BASIC27.32■■□□□ 1.96
PdgfbP31240 Dedd-201ENSMUST00000064950 1618 ntAPPRIS P1 TSL 1 (best) BASIC27.3■■□□□ 1.96
PdgfbP31240 Crip2-201ENSMUST00000084882 1439 ntAPPRIS P1 TSL 1 (best) BASIC27.3■■□□□ 1.96
PdgfbP31240 Aard-201ENSMUST00000090025 1348 ntAPPRIS P1 TSL 1 (best) BASIC27.29■■□□□ 1.96
PdgfbP31240 Syt7-201ENSMUST00000073899 1605 ntAPPRIS P1 TSL 1 (best) BASIC27.28■■□□□ 1.96
PdgfbP31240 Nemp1-202ENSMUST00000118612 1522 ntTSL 1 (best) BASIC27.28■■□□□ 1.96
PdgfbP31240 Gm20503-201ENSMUST00000174664 1294 ntAPPRIS P1 TSL 5 BASIC27.27■■□□□ 1.96
PdgfbP31240 Mxra7-202ENSMUST00000047715 757 ntAPPRIS ALT2 TSL 1 (best) BASIC27.27■■□□□ 1.96
PdgfbP31240 Lrrc1-204ENSMUST00000183734 2113 ntTSL 1 (best) BASIC27.26■■□□□ 1.96
PdgfbP31240 A530058N18Rik-207ENSMUST00000152254 1211 ntTSL 1 (best) BASIC27.26■■□□□ 1.95
PdgfbP31240 Gm5987-201ENSMUST00000196433 1151 ntBASIC27.26■■□□□ 1.95
PdgfbP31240 C2cd4d-201ENSMUST00000169433 1321 ntAPPRIS P1 TSL 3 BASIC27.25■■□□□ 1.95
PdgfbP31240 Gng13-201ENSMUST00000115108 347 ntAPPRIS P1 TSL 1 (best) BASIC27.25■■□□□ 1.95
PdgfbP31240 Qrich1-209ENSMUST00000194385 975 ntTSL 2 BASIC27.24■■□□□ 1.95
PdgfbP31240 Mipep-204ENSMUST00000225043 1548 ntBASIC27.24■■□□□ 1.95
PdgfbP31240 Gm2018-201ENSMUST00000140754 478 ntTSL 2 BASIC27.22■■□□□ 1.95
PdgfbP31240 Ube2e2-205ENSMUST00000150727 1523 ntAPPRIS P1 TSL 1 (best) BASIC27.21■■□□□ 1.95
PdgfbP31240 Capns1-201ENSMUST00000001845 1600 ntAPPRIS P2 TSL 5 BASIC27.21■■□□□ 1.95
PdgfbP31240 Macrod2-205ENSMUST00000110063 845 ntTSL 5 BASIC27.21■■□□□ 1.95
PdgfbP31240 C1qtnf5-201ENSMUST00000114815 1215 ntAPPRIS P1 TSL 1 (best) BASIC27.19■■□□□ 1.94
PdgfbP31240 Orai1-201ENSMUST00000051016 1482 ntAPPRIS P1 TSL 1 (best) BASIC27.19■■□□□ 1.94
PdgfbP31240 Cib1-201ENSMUST00000065163 1047 ntAPPRIS P1 TSL 1 (best) BASIC27.18■■□□□ 1.94
PdgfbP31240 Fbxo6-201ENSMUST00000030858 1346 ntAPPRIS P1 TSL 1 (best) BASIC27.17■■□□□ 1.94
PdgfbP31240 Crlf1-201ENSMUST00000008032 1644 ntAPPRIS P1 TSL 1 (best) BASIC27.17■■□□□ 1.94
PdgfbP31240 Snx24-202ENSMUST00000165032 1880 ntAPPRIS P1 TSL 1 (best) BASIC27.17■■□□□ 1.94
PdgfbP31240 Ube2q2-202ENSMUST00000121677 1680 ntAPPRIS ALT2 TSL 5 BASIC27.16■■□□□ 1.94
PdgfbP31240 A330023F24Rik-201ENSMUST00000181226 955 ntTSL 1 (best) BASIC27.15■■□□□ 1.94
PdgfbP31240 BC037032-205ENSMUST00000187080 508 ntTSL 5 BASIC27.15■■□□□ 1.94
PdgfbP31240 Evx2-202ENSMUST00000173623 1428 ntAPPRIS P2 TSL 1 (best) BASIC27.15■■□□□ 1.94
PdgfbP31240 Cetn4-202ENSMUST00000075537 762 ntTSL 3 BASIC27.11■■□□□ 1.93
PdgfbP31240 AY074887-201ENSMUST00000054018 769 ntAPPRIS P1 BASIC27.08■■□□□ 1.93
PdgfbP31240 Trp53rkb-202ENSMUST00000065753 1375 ntTSL 1 (best) BASIC27.08■■□□□ 1.93
PdgfbP31240 Tsen34-203ENSMUST00000108629 1238 ntTSL 1 (best) BASIC27.06■■□□□ 1.92
PdgfbP31240 March2-205ENSMUST00000173015 1418 ntTSL 3 BASIC27.05■■□□□ 1.92
PdgfbP31240 1810026B05Rik-202ENSMUST00000184554 782 ntTSL 3 BASIC27.03■■□□□ 1.92
PdgfbP31240 Bcl7c-207ENSMUST00000207019 654 ntTSL 3 BASIC27.02■■□□□ 1.92
PdgfbP31240 AC158592.1-201ENSMUST00000215560 1113 ntTSL 5 BASIC27.02■■□□□ 1.92
PdgfbP31240 Gm12523-201ENSMUST00000148844 599 ntTSL 5 BASIC27.01■■□□□ 1.91
PdgfbP31240 1810026B05Rik-206ENSMUST00000187421 519 ntTSL 3 BASIC27.01■■□□□ 1.91
PdgfbP31240 9230104M06Rik-201ENSMUST00000180971 1963 ntBASIC27■■□□□ 1.91
PdgfbP31240 Gm29254-202ENSMUST00000189302 883 ntTSL 1 (best) BASIC26.99■■□□□ 1.91
PdgfbP31240 Dapk3-209ENSMUST00000219850 1482 ntAPPRIS P1 TSL 1 (best) BASIC26.99■■□□□ 1.91
PdgfbP31240 Shf-201ENSMUST00000048635 1431 ntAPPRIS P2 TSL 1 (best) BASIC26.97■■□□□ 1.91
PdgfbP31240 Abhd17a-201ENSMUST00000003436 1468 ntAPPRIS P1 TSL 1 (best) BASIC26.94■■□□□ 1.9
PdgfbP31240 Casp9-202ENSMUST00000097805 1498 ntTSL 1 (best) BASIC26.92■■□□□ 1.9
PdgfbP31240 Stard3nl-210ENSMUST00000222869 1030 ntTSL 5 BASIC26.88■■□□□ 1.89
PdgfbP31240 Uba52-207ENSMUST00000140679 697 ntAPPRIS P1 TSL 2 BASIC26.85■■□□□ 1.89
PdgfbP31240 Gm24970-201ENSMUST00000175582 82 ntBASIC26.85■■□□□ 1.89
PdgfbP31240 Macrod1-201ENSMUST00000040261 1274 ntAPPRIS P1 TSL 1 (best) BASIC26.84■■□□□ 1.89
PdgfbP31240 Ube2f-202ENSMUST00000171112 1547 ntAPPRIS P1 TSL 1 (best) BASIC26.82■■□□□ 1.88
PdgfbP31240 Tmem243-201ENSMUST00000115365 1040 ntAPPRIS P1 TSL 2 BASIC26.82■■□□□ 1.88
PdgfbP31240 Gm9939-201ENSMUST00000067161 1154 ntBASIC26.81■■□□□ 1.88
PdgfbP31240 Zfyve21-201ENSMUST00000021714 1308 ntAPPRIS P2 TSL 1 (best) BASIC26.77■■□□□ 1.88
PdgfbP31240 Gm17110-201ENSMUST00000171248 735 ntTSL 3 BASIC26.77■■□□□ 1.88
PdgfbP31240 Fcho2-203ENSMUST00000109403 1523 ntTSL 5 BASIC26.76■■□□□ 1.87
PdgfbP31240 Dhrs13-203ENSMUST00000122342 1791 ntTSL 1 (best) BASIC26.76■■□□□ 1.87
PdgfbP31240 Ccm2l-201ENSMUST00000109800 2158 ntAPPRIS P1 TSL 5 BASIC26.74■■□□□ 1.87
PdgfbP31240 Dlx6os2-201ENSMUST00000178206 1354 ntBASIC26.72■■□□□ 1.87
PdgfbP31240 4930542C12Rik-201ENSMUST00000171096 1203 ntBASIC26.72■■□□□ 1.87
PdgfbP31240 Vsig8-202ENSMUST00000177086 1519 ntTSL 1 (best) BASIC26.71■■□□□ 1.87
PdgfbP31240 Gm8503-201ENSMUST00000118131 455 ntBASIC26.7■■□□□ 1.86
PdgfbP31240 Naa20-201ENSMUST00000002805 1172 ntTSL 1 (best) BASIC26.7■■□□□ 1.86
PdgfbP31240 E330040D14Rik-201ENSMUST00000192299 1374 ntBASIC26.68■■□□□ 1.86
PdgfbP31240 Gm12100-201ENSMUST00000150255 1933 ntTSL 1 (best) BASIC26.67■■□□□ 1.86
PdgfbP31240 Eif5a-201ENSMUST00000043419 1437 ntAPPRIS P1 TSL 1 (best) BASIC26.65■■□□□ 1.86
PdgfbP31240 Hrh3-208ENSMUST00000171736 906 ntTSL 5 BASIC26.65■■□□□ 1.86
PdgfbP31240 Scx-201ENSMUST00000043089 1136 ntAPPRIS P1 TSL 1 (best) BASIC26.65■■□□□ 1.86
PdgfbP31240 Junos-204ENSMUST00000128094 830 ntTSL 1 (best) BASIC26.63■■□□□ 1.85
PdgfbP31240 Stradb-202ENSMUST00000114296 1348 ntTSL 1 (best) BASIC26.6■■□□□ 1.85
PdgfbP31240 Rnf215-201ENSMUST00000003677 1874 ntAPPRIS P1 TSL 1 (best) BASIC26.59■■□□□ 1.85
PdgfbP31240 Gm527-201ENSMUST00000058135 1468 ntAPPRIS P1 TSL 1 (best) BASIC26.58■■□□□ 1.85
PdgfbP31240 Gm6821-201ENSMUST00000107540 542 ntBASIC26.58■■□□□ 1.85
PdgfbP31240 Rnd2-201ENSMUST00000001347 1394 ntAPPRIS P1 TSL 1 (best) BASIC26.58■■□□□ 1.84
PdgfbP31240 Atp1b3-201ENSMUST00000034983 1994 ntAPPRIS P1 TSL 1 (best) BASIC26.57■■□□□ 1.84
PdgfbP31240 Tnfsf12-202ENSMUST00000181810 1435 ntAPPRIS P1 TSL 1 (best) BASIC26.56■■□□□ 1.84
PdgfbP31240 Ranbp1-202ENSMUST00000115645 1085 ntAPPRIS P1 TSL 1 (best) BASIC26.56■■□□□ 1.84
PdgfbP31240 Sowahd-201ENSMUST00000060057 1574 ntAPPRIS P1 BASIC26.55■■□□□ 1.84
PdgfbP31240 Cadm4-201ENSMUST00000068023 2161 ntAPPRIS P1 TSL 1 (best) BASIC26.54■■□□□ 1.84
PdgfbP31240 Zic2-201ENSMUST00000075888 2440 ntAPPRIS P1 TSL 1 (best) BASIC26.54■■□□□ 1.84
PdgfbP31240 Lactb-202ENSMUST00000215172 1806 ntTSL 1 (best) BASIC26.53■■□□□ 1.84
PdgfbP31240 Twist1-201ENSMUST00000049089 1628 ntAPPRIS P1 TSL 1 (best) BASIC26.52■■□□□ 1.84
PdgfbP31240 Tceal5-201ENSMUST00000066819 1044 ntAPPRIS P1 TSL 1 (best) BASIC26.5■■□□□ 1.83
Retrieved 100 of 76,532 protein–RNA pairs in 91.2 ms