Protein–RNA interactions for Protein: P0C8K7

Smim1, Small integral membrane protein 1, mousemouse

Predictions only

Length 78 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Smim1P0C8K7 Tpm1-216ENSMUST00000113707 1898 ntTSL 1 (best) BASIC18.11■□□□□ 0.49
Smim1P0C8K7 Gm960-204ENSMUST00000225896 2202 ntAPPRIS ALT2 BASIC18.08■□□□□ 0.49
Smim1P0C8K7 Smurf1-202ENSMUST00000100461 2725 ntAPPRIS ALT1 TSL 1 (best) BASIC18.08■□□□□ 0.49
Smim1P0C8K7 Stard10-201ENSMUST00000032927 1400 ntAPPRIS P1 TSL 1 (best) BASIC18.07■□□□□ 0.48
Smim1P0C8K7 Tmem59-201ENSMUST00000030361 1775 ntAPPRIS P1 TSL 1 (best) BASIC18.07■□□□□ 0.48
Smim1P0C8K7 Galnt10-202ENSMUST00000108846 1745 ntTSL 1 (best) BASIC18.06■□□□□ 0.48
Smim1P0C8K7 Pfn2-202ENSMUST00000119344 1879 ntTSL 1 (best) BASIC18.05■□□□□ 0.48
Smim1P0C8K7 Adgrb1-203ENSMUST00000185682 2744 ntTSL 1 (best) BASIC18.04■□□□□ 0.48
Smim1P0C8K7 Igfbp3-202ENSMUST00000135887 1709 ntAPPRIS P1 TSL 1 (best) BASIC18.03■□□□□ 0.48
Smim1P0C8K7 Rbfox2-201ENSMUST00000048145 1720 ntTSL 1 (best) BASIC18.03■□□□□ 0.48
Smim1P0C8K7 Ttc19-202ENSMUST00000101075 2193 ntAPPRIS ALT2 TSL 1 (best) BASIC18.01■□□□□ 0.47
Smim1P0C8K7 Ric1-206ENSMUST00000162184 2157 ntTSL 1 (best) BASIC18.01■□□□□ 0.47
Smim1P0C8K7 Amer2-203ENSMUST00000225247 2662 ntBASIC18.01■□□□□ 0.47
Smim1P0C8K7 Lactb-202ENSMUST00000215172 1806 ntTSL 1 (best) BASIC18■□□□□ 0.47
Smim1P0C8K7 Arhgdia-201ENSMUST00000067936 2150 ntAPPRIS P1 TSL 1 (best) BASIC18■□□□□ 0.47
Smim1P0C8K7 Prr3-201ENSMUST00000055454 2727 ntAPPRIS P3 TSL 1 (best) BASIC18■□□□□ 0.47
Smim1P0C8K7 Ildr2-205ENSMUST00000193860 2320 ntTSL 1 (best) BASIC17.98■□□□□ 0.47
Smim1P0C8K7 Rnf19b-201ENSMUST00000030584 2414 ntAPPRIS ALT2 TSL 5 BASIC17.98■□□□□ 0.47
Smim1P0C8K7 Cd63-201ENSMUST00000026407 1063 ntAPPRIS P1 TSL 1 (best) BASIC17.98■□□□□ 0.47
Smim1P0C8K7 Ildr2-207ENSMUST00000195557 1947 ntAPPRIS ALT2 TSL 1 (best) BASIC17.98■□□□□ 0.47
Smim1P0C8K7 Clk2-202ENSMUST00000121212 2154 ntAPPRIS P3 TSL 1 (best) BASIC17.96■□□□□ 0.47
Smim1P0C8K7 Dlg1-203ENSMUST00000100001 4711 ntAPPRIS ALT2 TSL 5 BASIC17.96■□□□□ 0.47
Smim1P0C8K7 Kansl2-201ENSMUST00000023727 2311 ntAPPRIS ALT2 TSL 5 BASIC17.95■□□□□ 0.46
Smim1P0C8K7 Fezf2-202ENSMUST00000224023 1917 ntBASIC17.95■□□□□ 0.46
Smim1P0C8K7 2410017I17Rik-202ENSMUST00000090537 2053 ntTSL 2 BASIC17.95■□□□□ 0.46
Smim1P0C8K7 Mypop-203ENSMUST00000131087 1951 ntAPPRIS P1 TSL 5 BASIC17.93■□□□□ 0.46
Smim1P0C8K7 Gm45716-202ENSMUST00000134929 2031 ntAPPRIS P1 TSL 1 (best) BASIC17.93■□□□□ 0.46
Smim1P0C8K7 Rnf220-212ENSMUST00000221654 1949 ntTSL 1 (best) BASIC17.93■□□□□ 0.46
Smim1P0C8K7 Rab40c-209ENSMUST00000179998 2456 ntAPPRIS P1 TSL 5 BASIC17.93■□□□□ 0.46
Smim1P0C8K7 Efna3-201ENSMUST00000029673 2363 ntAPPRIS P2 TSL 1 (best) BASIC17.93■□□□□ 0.46
Smim1P0C8K7 Ywhah-201ENSMUST00000019109 1764 ntAPPRIS P1 TSL 1 (best) BASIC17.92■□□□□ 0.46
Smim1P0C8K7 Gsk3a-202ENSMUST00000108411 2248 ntAPPRIS ALT2 TSL 5 BASIC17.92■□□□□ 0.46
Smim1P0C8K7 Pon2-201ENSMUST00000057792 2409 ntAPPRIS P1 TSL 1 (best) BASIC17.92■□□□□ 0.46
Smim1P0C8K7 Ebag9-203ENSMUST00000227691 1945 ntAPPRIS P1 BASIC17.92■□□□□ 0.46
Smim1P0C8K7 Hdgf-201ENSMUST00000005017 2245 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
Smim1P0C8K7 Mpp6-203ENSMUST00000166318 2222 ntTSL 1 (best) BASIC17.91■□□□□ 0.46
Smim1P0C8K7 Ier5l-201ENSMUST00000065134 2683 ntAPPRIS P1 BASIC17.9■□□□□ 0.46
Smim1P0C8K7 Lactb-201ENSMUST00000034929 2031 ntAPPRIS P1 TSL 1 (best) BASIC17.89■□□□□ 0.46
Smim1P0C8K7 Pwwp2a-202ENSMUST00000094294 1814 ntTSL 5 BASIC17.88■□□□□ 0.45
Smim1P0C8K7 Rgs7-206ENSMUST00000194555 2431 ntAPPRIS ALT2 TSL 1 (best) BASIC17.88■□□□□ 0.45
Smim1P0C8K7 Pfdn2-202ENSMUST00000135941 1735 ntAPPRIS P1 TSL 1 (best) BASIC17.88■□□□□ 0.45
Smim1P0C8K7 Raly-201ENSMUST00000029120 1802 ntAPPRIS ALT2 TSL 5 BASIC17.88■□□□□ 0.45
Smim1P0C8K7 Clk2-203ENSMUST00000121931 2112 ntAPPRIS ALT1 TSL 5 BASIC17.87■□□□□ 0.45
Smim1P0C8K7 Gnai2-202ENSMUST00000192615 1777 ntAPPRIS P1 TSL 1 (best) BASIC17.86■□□□□ 0.45
Smim1P0C8K7 Iffo2-203ENSMUST00000174078 5716 ntAPPRIS ALT2 TSL 1 (best) BASIC17.86■□□□□ 0.45
Smim1P0C8K7 Irx4-201ENSMUST00000022095 2589 ntAPPRIS P1 TSL 1 (best) BASIC17.86■□□□□ 0.45
Smim1P0C8K7 Rcor2-201ENSMUST00000066646 2801 ntAPPRIS P1 TSL 1 (best) BASIC17.86■□□□□ 0.45
Smim1P0C8K7 Marveld2-202ENSMUST00000163163 2187 ntTSL 1 (best) BASIC17.86■□□□□ 0.45
Smim1P0C8K7 Klhl25-205ENSMUST00000206019 2299 ntAPPRIS P1 TSL 1 (best) BASIC17.86■□□□□ 0.45
Smim1P0C8K7 AC153911.1-202ENSMUST00000218534 1034 ntBASIC17.85■□□□□ 0.45
Smim1P0C8K7 Smad7-202ENSMUST00000168918 1882 ntAPPRIS P1 TSL 1 (best) BASIC17.84■□□□□ 0.45
Smim1P0C8K7 Fam220a-206ENSMUST00000196487 2278 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
Smim1P0C8K7 Kcna7-201ENSMUST00000107774 2182 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
Smim1P0C8K7 Hoxc13-201ENSMUST00000001700 2461 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
Smim1P0C8K7 Arx-202ENSMUST00000113947 2454 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
Smim1P0C8K7 Trp53i13-201ENSMUST00000060417 1463 ntAPPRIS P2 TSL 1 (best) BASIC17.81■□□□□ 0.44
Smim1P0C8K7 Gm24109-201ENSMUST00000175489 103 ntBASIC17.8■□□□□ 0.44
Smim1P0C8K7 Gpr12-201ENSMUST00000036211 2219 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
Smim1P0C8K7 Zfp131-207ENSMUST00000224946 1783 ntBASIC17.79■□□□□ 0.44
Smim1P0C8K7 AC153890.1-201ENSMUST00000220021 2469 ntBASIC17.78■□□□□ 0.44
Smim1P0C8K7 Panx2-202ENSMUST00000161372 2314 ntTSL 1 (best) BASIC17.77■□□□□ 0.44
Smim1P0C8K7 Fam220a-205ENSMUST00000169329 2331 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.44
Smim1P0C8K7 Sh3glb2-214ENSMUST00000163668 1733 ntTSL 5 BASIC17.77■□□□□ 0.44
Smim1P0C8K7 Fcho2-203ENSMUST00000109403 1523 ntTSL 5 BASIC17.77■□□□□ 0.43
Smim1P0C8K7 4921531C22Rik-201ENSMUST00000150145 1905 ntTSL 1 (best) BASIC17.76■□□□□ 0.43
Smim1P0C8K7 Maz-204ENSMUST00000206254 2282 ntTSL 5 BASIC17.75■□□□□ 0.43
Smim1P0C8K7 Ubp1-203ENSMUST00000116492 2111 ntAPPRIS ALT1 TSL 1 (best) BASIC17.75■□□□□ 0.43
Smim1P0C8K7 Sec63-201ENSMUST00000019937 6032 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
Smim1P0C8K7 Raly-204ENSMUST00000116389 1759 ntAPPRIS ALT2 TSL 5 BASIC17.74■□□□□ 0.43
Smim1P0C8K7 Grb2-202ENSMUST00000106495 2041 ntTSL 5 BASIC17.74■□□□□ 0.43
Smim1P0C8K7 Rnf149-201ENSMUST00000062525 2492 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
Smim1P0C8K7 Atp5a1-202ENSMUST00000114748 2674 ntTSL 1 (best) BASIC17.73■□□□□ 0.43
Smim1P0C8K7 Nrgn-201ENSMUST00000065668 1453 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
Smim1P0C8K7 Phf10-201ENSMUST00000024657 1663 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
Smim1P0C8K7 Neurog2-201ENSMUST00000029587 2227 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
Smim1P0C8K7 Ring1-201ENSMUST00000025183 2034 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
Smim1P0C8K7 Snta1-202ENSMUST00000109728 2131 ntAPPRIS P2 TSL 1 (best) BASIC17.68■□□□□ 0.42
Smim1P0C8K7 Snta1-201ENSMUST00000028991 2125 ntAPPRIS ALT2 TSL 1 (best) BASIC17.68■□□□□ 0.42
Smim1P0C8K7 Rcan1-202ENSMUST00000060005 2324 ntTSL 1 (best) BASIC17.67■□□□□ 0.42
Smim1P0C8K7 Tusc1-201ENSMUST00000066774 1374 ntAPPRIS P1 BASIC17.66■□□□□ 0.42
Smim1P0C8K7 Nectin3-203ENSMUST00000096052 1746 ntAPPRIS ALT2 TSL 1 (best) BASIC17.65■□□□□ 0.42
Smim1P0C8K7 Cited2-203ENSMUST00000219558 2411 ntAPPRIS P1 BASIC17.65■□□□□ 0.42
Smim1P0C8K7 Lpcat4-201ENSMUST00000028554 2275 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
Smim1P0C8K7 Gm23366-201ENSMUST00000175022 89 ntBASIC17.64■□□□□ 0.41
Smim1P0C8K7 Terf2-201ENSMUST00000068388 1915 ntAPPRIS ALT2 TSL 1 (best) BASIC17.63■□□□□ 0.41
Smim1P0C8K7 E2f1-201ENSMUST00000000894 2755 ntAPPRIS ALT2 TSL 1 (best) BASIC17.63■□□□□ 0.41
Smim1P0C8K7 Suds3-202ENSMUST00000166397 1694 ntAPPRIS ALT2 TSL 1 (best) BASIC17.63■□□□□ 0.41
Smim1P0C8K7 Lrrc4b-201ENSMUST00000058667 2728 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
Smim1P0C8K7 Agap3-201ENSMUST00000024123 3207 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
Smim1P0C8K7 Ica1-201ENSMUST00000038403 2075 ntAPPRIS P2 TSL 1 (best) BASIC17.62■□□□□ 0.41
Smim1P0C8K7 Cnnm3-201ENSMUST00000001166 5193 ntAPPRIS P4 TSL 1 (best) BASIC17.61■□□□□ 0.41
Smim1P0C8K7 Gas2l1-201ENSMUST00000037146 2686 ntAPPRIS ALT2 TSL 1 (best) BASIC17.61■□□□□ 0.41
Smim1P0C8K7 Dtnb-203ENSMUST00000164578 2355 ntTSL 1 (best) BASIC17.61■□□□□ 0.41
Smim1P0C8K7 Dyrk1a-202ENSMUST00000119878 5759 ntAPPRIS P1 TSL 5 BASIC17.6■□□□□ 0.41
Smim1P0C8K7 E2f6-201ENSMUST00000020908 2418 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
Smim1P0C8K7 Tspan3-201ENSMUST00000034876 1716 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
Smim1P0C8K7 Nr2f6-201ENSMUST00000002466 2218 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
Smim1P0C8K7 Gltp-201ENSMUST00000012028 1762 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
Smim1P0C8K7 Cnnm3-202ENSMUST00000097776 5292 ntAPPRIS ALT2 TSL 1 (best) BASIC17.59■□□□□ 0.41
Smim1P0C8K7 Cetn4-201ENSMUST00000071400 1808 ntTSL 5 BASIC17.58■□□□□ 0.4
Retrieved 100 of 76,532 protein–RNA pairs in 25.9 ms