Protein–RNA interactions for Protein: O88393

Tgfbr3, Transforming growth factor beta receptor type 3, mousemouse

Predictions only

Length 850 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Tgfbr3O88393 CT030161.2-201ENSMUST00000218666 735 ntTSL 3 BASIC25.6■■□□□ 1.69
Tgfbr3O88393 1700016A09Rik-201ENSMUST00000192004 835 ntBASIC25.58■■□□□ 1.69
Tgfbr3O88393 Ccm2l-201ENSMUST00000109800 2158 ntAPPRIS P1 TSL 5 BASIC25.58■■□□□ 1.68
Tgfbr3O88393 Lsm4-204ENSMUST00000210071 575 ntTSL 5 BASIC25.57■■□□□ 1.68
Tgfbr3O88393 Nrtn-201ENSMUST00000044752 1023 ntAPPRIS P1 TSL 1 (best) BASIC25.57■■□□□ 1.68
Tgfbr3O88393 Ube2q2-202ENSMUST00000121677 1680 ntAPPRIS ALT2 TSL 5 BASIC25.57■■□□□ 1.68
Tgfbr3O88393 Gm527-203ENSMUST00000220993 1090 ntTSL 5 BASIC25.56■■□□□ 1.68
Tgfbr3O88393 Gm42517-201ENSMUST00000197216 1850 ntAPPRIS P1 BASIC25.53■■□□□ 1.68
Tgfbr3O88393 Tmeff1-202ENSMUST00000123476 1224 ntAPPRIS P1 TSL 1 (best) BASIC25.53■■□□□ 1.68
Tgfbr3O88393 Gm5601-202ENSMUST00000207161 1437 ntTSL 1 (best) BASIC25.53■■□□□ 1.68
Tgfbr3O88393 1190005I06Rik-201ENSMUST00000123927 844 ntAPPRIS P2 TSL 1 (best) BASIC25.52■■□□□ 1.68
Tgfbr3O88393 Casp9-202ENSMUST00000097805 1498 ntTSL 1 (best) BASIC25.5■■□□□ 1.67
Tgfbr3O88393 Syt7-201ENSMUST00000073899 1605 ntAPPRIS P1 TSL 1 (best) BASIC25.49■■□□□ 1.67
Tgfbr3O88393 Kcnmb4os2-201ENSMUST00000080943 1571 ntTSL 5 BASIC25.47■■□□□ 1.67
Tgfbr3O88393 Shf-201ENSMUST00000048635 1431 ntAPPRIS P2 TSL 1 (best) BASIC25.46■■□□□ 1.67
Tgfbr3O88393 A530058N18Rik-201ENSMUST00000128469 646 ntTSL 2 BASIC25.44■■□□□ 1.66
Tgfbr3O88393 Rnf215-201ENSMUST00000003677 1874 ntAPPRIS P1 TSL 1 (best) BASIC25.43■■□□□ 1.66
Tgfbr3O88393 AC150314.2-201ENSMUST00000214135 834 ntTSL 5 BASIC25.43■■□□□ 1.66
Tgfbr3O88393 Crlf1-201ENSMUST00000008032 1644 ntAPPRIS P1 TSL 1 (best) BASIC25.42■■□□□ 1.66
Tgfbr3O88393 Atp1b3-201ENSMUST00000034983 1994 ntAPPRIS P1 TSL 1 (best) BASIC25.42■■□□□ 1.66
Tgfbr3O88393 Gm45855-201ENSMUST00000212546 880 ntBASIC25.41■■□□□ 1.66
Tgfbr3O88393 Dapk3-209ENSMUST00000219850 1482 ntAPPRIS P1 TSL 1 (best) BASIC25.36■■□□□ 1.65
Tgfbr3O88393 Sept3-202ENSMUST00000116423 2467 ntAPPRIS P1 TSL 1 (best) BASIC25.36■■□□□ 1.65
Tgfbr3O88393 Hoxa13-201ENSMUST00000047993 1309 ntAPPRIS ALT2 TSL 5 BASIC25.36■■□□□ 1.65
Tgfbr3O88393 Tnfsfm13-201ENSMUST00000108649 1049 ntAPPRIS ALT2 TSL 5 BASIC25.35■■□□□ 1.65
Tgfbr3O88393 Cadm4-201ENSMUST00000068023 2161 ntAPPRIS P1 TSL 1 (best) BASIC25.33■■□□□ 1.65
Tgfbr3O88393 Foxd3-201ENSMUST00000087285 2324 ntAPPRIS P1 BASIC25.33■■□□□ 1.65
Tgfbr3O88393 4932443I19Rik-201ENSMUST00000166277 799 ntAPPRIS P2 TSL 1 (best) BASIC25.32■■□□□ 1.64
Tgfbr3O88393 Dtnbp1-201ENSMUST00000072329 1362 ntAPPRIS P2 TSL 1 (best) BASIC25.31■■□□□ 1.64
Tgfbr3O88393 A530058N18Rik-207ENSMUST00000152254 1211 ntTSL 1 (best) BASIC25.3■■□□□ 1.64
Tgfbr3O88393 Abhd17a-201ENSMUST00000003436 1468 ntAPPRIS P1 TSL 1 (best) BASIC25.28■■□□□ 1.64
Tgfbr3O88393 Cdk2ap1-201ENSMUST00000031341 1315 ntAPPRIS P2 TSL 1 (best) BASIC25.27■■□□□ 1.64
Tgfbr3O88393 Trp53rkb-202ENSMUST00000065753 1375 ntTSL 1 (best) BASIC25.27■■□□□ 1.64
Tgfbr3O88393 Smarcc2-205ENSMUST00000218228 603 ntTSL 5 BASIC25.26■■□□□ 1.63
Tgfbr3O88393 Aard-201ENSMUST00000090025 1348 ntAPPRIS P1 TSL 1 (best) BASIC25.25■■□□□ 1.63
Tgfbr3O88393 Macrod2-205ENSMUST00000110063 845 ntTSL 5 BASIC25.24■■□□□ 1.63
Tgfbr3O88393 Fcho2-203ENSMUST00000109403 1523 ntTSL 5 BASIC25.23■■□□□ 1.63
Tgfbr3O88393 1110008F13Rik-201ENSMUST00000029165 1045 ntAPPRIS P1 TSL 1 (best) BASIC25.22■■□□□ 1.63
Tgfbr3O88393 Dedd-201ENSMUST00000064950 1618 ntAPPRIS P1 TSL 1 (best) BASIC25.22■■□□□ 1.63
Tgfbr3O88393 Gm9397-201ENSMUST00000200125 605 ntBASIC25.21■■□□□ 1.63
Tgfbr3O88393 Emx1-201ENSMUST00000045942 1561 ntAPPRIS P1 TSL 1 (best) BASIC25.2■■□□□ 1.62
Tgfbr3O88393 Fbxo6-201ENSMUST00000030858 1346 ntAPPRIS P1 TSL 1 (best) BASIC25.17■■□□□ 1.62
Tgfbr3O88393 Mthfd2l-203ENSMUST00000202781 688 ntTSL 1 (best) BASIC25.16■■□□□ 1.62
Tgfbr3O88393 Lactb-202ENSMUST00000215172 1806 ntTSL 1 (best) BASIC25.15■■□□□ 1.62
Tgfbr3O88393 Gm26699-201ENSMUST00000180825 2291 ntTSL 5 BASIC25.15■■□□□ 1.62
Tgfbr3O88393 Cds2-203ENSMUST00000110158 1247 ntTSL 1 (best) BASIC25.14■■□□□ 1.62
Tgfbr3O88393 Capns1-201ENSMUST00000001845 1600 ntAPPRIS P2 TSL 5 BASIC25.13■■□□□ 1.61
Tgfbr3O88393 Qrich1-209ENSMUST00000194385 975 ntTSL 2 BASIC25.13■■□□□ 1.61
Tgfbr3O88393 Dhrs13-203ENSMUST00000122342 1791 ntTSL 1 (best) BASIC25.13■■□□□ 1.61
Tgfbr3O88393 Dut-202ENSMUST00000082122 1020 ntTSL 1 (best) BASIC25.11■■□□□ 1.61
Tgfbr3O88393 Crip2-201ENSMUST00000084882 1439 ntAPPRIS P1 TSL 1 (best) BASIC25.11■■□□□ 1.61
Tgfbr3O88393 Egln2-201ENSMUST00000080058 2107 ntAPPRIS P1 TSL 1 (best) BASIC25.1■■□□□ 1.61
Tgfbr3O88393 Ppp1r14b-201ENSMUST00000070850 919 ntAPPRIS P1 TSL 1 (best) BASIC25.1■■□□□ 1.61
Tgfbr3O88393 BC037032-205ENSMUST00000187080 508 ntTSL 5 BASIC25.09■■□□□ 1.61
Tgfbr3O88393 2810459M11Rik-201ENSMUST00000027429 1225 ntAPPRIS ALT2 TSL 1 (best) BASIC25.09■■□□□ 1.61
Tgfbr3O88393 C2cd4d-201ENSMUST00000169433 1321 ntAPPRIS P1 TSL 3 BASIC25.08■■□□□ 1.6
Tgfbr3O88393 Gnai2-201ENSMUST00000055704 2215 ntAPPRIS P1 TSL 1 (best) BASIC25.07■■□□□ 1.6
Tgfbr3O88393 Mxra7-202ENSMUST00000047715 757 ntAPPRIS ALT2 TSL 1 (best) BASIC25.07■■□□□ 1.6
Tgfbr3O88393 Gm20503-201ENSMUST00000174664 1294 ntAPPRIS P1 TSL 5 BASIC25.06■■□□□ 1.6
Tgfbr3O88393 Calm3-201ENSMUST00000019514 2290 ntAPPRIS P1 TSL 1 (best) BASIC25.06■■□□□ 1.6
Tgfbr3O88393 Spg7-201ENSMUST00000108868 845 ntTSL 2 BASIC25.04■■□□□ 1.6
Tgfbr3O88393 Gng13-201ENSMUST00000115108 347 ntAPPRIS P1 TSL 1 (best) BASIC25.04■■□□□ 1.6
Tgfbr3O88393 March2-205ENSMUST00000173015 1418 ntTSL 3 BASIC25.03■■□□□ 1.6
Tgfbr3O88393 Ube2f-202ENSMUST00000171112 1547 ntAPPRIS P1 TSL 1 (best) BASIC25.03■■□□□ 1.6
Tgfbr3O88393 Orai1-201ENSMUST00000051016 1482 ntAPPRIS P1 TSL 1 (best) BASIC25.02■■□□□ 1.6
Tgfbr3O88393 C1qtnf5-201ENSMUST00000114815 1215 ntAPPRIS P1 TSL 1 (best) BASIC25.02■■□□□ 1.6
Tgfbr3O88393 Pradc1-202ENSMUST00000113770 610 ntTSL 1 (best) BASIC25.01■■□□□ 1.59
Tgfbr3O88393 Tnfsf12-202ENSMUST00000181810 1435 ntAPPRIS P1 TSL 1 (best) BASIC25.01■■□□□ 1.59
Tgfbr3O88393 Vsig8-202ENSMUST00000177086 1519 ntTSL 1 (best) BASIC25.01■■□□□ 1.59
Tgfbr3O88393 E330040D14Rik-201ENSMUST00000192299 1374 ntBASIC25■■□□□ 1.59
Tgfbr3O88393 1810026B05Rik-202ENSMUST00000184554 782 ntTSL 3 BASIC24.97■■□□□ 1.59
Tgfbr3O88393 1810026B05Rik-206ENSMUST00000187421 519 ntTSL 3 BASIC24.97■■□□□ 1.59
Tgfbr3O88393 Tprgl-201ENSMUST00000030896 1724 ntAPPRIS P1 TSL 1 (best) BASIC24.95■■□□□ 1.58
Tgfbr3O88393 Epcam-201ENSMUST00000053577 2040 ntAPPRIS P1 TSL 5 BASIC24.94■■□□□ 1.58
Tgfbr3O88393 A330023F24Rik-201ENSMUST00000181226 955 ntTSL 1 (best) BASIC24.93■■□□□ 1.58
Tgfbr3O88393 Ldb1-208ENSMUST00000185355 2088 ntTSL 1 (best) BASIC24.91■■□□□ 1.58
Tgfbr3O88393 Ranbp1-202ENSMUST00000115645 1085 ntAPPRIS P1 TSL 1 (best) BASIC24.91■■□□□ 1.58
Tgfbr3O88393 Ssbp3-203ENSMUST00000097934 1742 ntAPPRIS ALT2 TSL 5 BASIC24.9■■□□□ 1.58
Tgfbr3O88393 Tsen34-203ENSMUST00000108629 1238 ntTSL 1 (best) BASIC24.88■■□□□ 1.57
Tgfbr3O88393 Rpia-201ENSMUST00000066134 1829 ntAPPRIS P1 TSL 1 (best) BASIC24.87■■□□□ 1.57
Tgfbr3O88393 Gm24970-201ENSMUST00000175582 82 ntBASIC24.87■■□□□ 1.57
Tgfbr3O88393 Ubl4a-207ENSMUST00000178691 1038 ntAPPRIS P1 TSL 2 BASIC24.87■■□□□ 1.57
Tgfbr3O88393 Stard3nl-210ENSMUST00000222869 1030 ntTSL 5 BASIC24.87■■□□□ 1.57
Tgfbr3O88393 Cetn4-202ENSMUST00000075537 762 ntTSL 3 BASIC24.87■■□□□ 1.57
Tgfbr3O88393 Cib1-201ENSMUST00000065163 1047 ntAPPRIS P1 TSL 1 (best) BASIC24.86■■□□□ 1.57
Tgfbr3O88393 Tmem243-201ENSMUST00000115365 1040 ntAPPRIS P1 TSL 2 BASIC24.84■■□□□ 1.57
Tgfbr3O88393 Evx2-202ENSMUST00000173623 1428 ntAPPRIS P2 TSL 1 (best) BASIC24.84■■□□□ 1.57
Tgfbr3O88393 Hrh3-208ENSMUST00000171736 906 ntTSL 5 BASIC24.82■■□□□ 1.56
Tgfbr3O88393 Ube2ql1-201ENSMUST00000065118 2674 ntAPPRIS P1 TSL 1 (best) BASIC24.82■■□□□ 1.56
Tgfbr3O88393 Tnfsfm13-202ENSMUST00000174159 1470 ntAPPRIS ALT2 TSL 2 BASIC24.81■■□□□ 1.56
Tgfbr3O88393 Bok-201ENSMUST00000027499 1468 ntAPPRIS P1 TSL 1 (best) BASIC24.81■■□□□ 1.56
Tgfbr3O88393 Rnd2-201ENSMUST00000001347 1394 ntAPPRIS P1 TSL 1 (best) BASIC24.8■■□□□ 1.56
Tgfbr3O88393 Sowahd-201ENSMUST00000060057 1574 ntAPPRIS P1 BASIC24.8■■□□□ 1.56
Tgfbr3O88393 Gkap1-201ENSMUST00000091579 1523 ntAPPRIS P1 TSL 1 (best) BASIC24.78■■□□□ 1.56
Tgfbr3O88393 Junos-204ENSMUST00000128094 830 ntTSL 1 (best) BASIC24.78■■□□□ 1.56
Tgfbr3O88393 Gm12523-201ENSMUST00000148844 599 ntTSL 5 BASIC24.78■■□□□ 1.56
Tgfbr3O88393 Mocs3-201ENSMUST00000099071 1973 ntAPPRIS P1 BASIC24.78■■□□□ 1.56
Tgfbr3O88393 AY074887-201ENSMUST00000054018 769 ntAPPRIS P1 BASIC24.76■■□□□ 1.55
Tgfbr3O88393 Wsb2-201ENSMUST00000031309 2421 ntAPPRIS P2 TSL 1 (best) BASIC24.75■■□□□ 1.55
Tgfbr3O88393 Fndc10-201ENSMUST00000099265 2140 ntAPPRIS P1 BASIC24.75■■□□□ 1.55
Retrieved 100 of 76,532 protein–RNA pairs in 17.5 ms