Protein–RNA interactions for Protein: O55242

Sigmar1, Sigma non-opioid intracellular receptor 1, mousemouse

Predictions only

Length 223 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Sigmar1O55242 Scrt2-201ENSMUST00000064061 3395 ntAPPRIS P1 TSL 5 BASIC17.9■□□□□ 0.46
Sigmar1O55242 Epb41l4b-203ENSMUST00000095076 6746 ntAPPRIS ALT2 TSL 5 BASIC17.9■□□□□ 0.46
Sigmar1O55242 Syncrip-201ENSMUST00000069221 9450 ntAPPRIS P3 TSL 1 (best) BASIC17.84■□□□□ 0.45
Sigmar1O55242 Rnf215-201ENSMUST00000003677 1874 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
Sigmar1O55242 Fam220a-204ENSMUST00000119488 2202 ntTSL 1 (best) BASIC17.82■□□□□ 0.44
Sigmar1O55242 Fam220a-209ENSMUST00000200267 2202 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
Sigmar1O55242 Rnf126-201ENSMUST00000047203 1639 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
Sigmar1O55242 Fcho2-201ENSMUST00000040340 5122 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
Sigmar1O55242 Kat2b-201ENSMUST00000000724 4653 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
Sigmar1O55242 Gsk3a-201ENSMUST00000071739 2260 ntAPPRIS P2 TSL 2 BASIC17.79■□□□□ 0.44
Sigmar1O55242 Fam220a-206ENSMUST00000196487 2278 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
Sigmar1O55242 Atp5a1-202ENSMUST00000114748 2674 ntTSL 1 (best) BASIC17.78■□□□□ 0.44
Sigmar1O55242 Kctd5-201ENSMUST00000017090 2443 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
Sigmar1O55242 Vsig8-201ENSMUST00000061835 1801 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
Sigmar1O55242 Cnot6l-203ENSMUST00000122003 2089 ntTSL 1 (best) BASIC17.76■□□□□ 0.43
Sigmar1O55242 Arhgap22-201ENSMUST00000111955 2148 ntTSL 1 (best) BASIC17.75■□□□□ 0.43
Sigmar1O55242 Dennd5a-202ENSMUST00000106722 4862 ntTSL 1 (best) BASIC17.73■□□□□ 0.43
Sigmar1O55242 Ythdf1-202ENSMUST00000108876 2272 ntTSL 1 (best) BASIC17.73■□□□□ 0.43
Sigmar1O55242 Kcnmb4-201ENSMUST00000068233 1367 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
Sigmar1O55242 Ssx2ip-202ENSMUST00000106149 2416 ntAPPRIS ALT2 TSL 1 (best) BASIC17.71■□□□□ 0.43
Sigmar1O55242 Kansl2-201ENSMUST00000023727 2311 ntAPPRIS ALT2 TSL 5 BASIC17.7■□□□□ 0.42
Sigmar1O55242 E2f4-201ENSMUST00000015003 1993 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
Sigmar1O55242 Eif3j2-201ENSMUST00000057110 2379 ntAPPRIS P1 BASIC17.69■□□□□ 0.42
Sigmar1O55242 Kdm2a-203ENSMUST00000116571 2413 ntTSL 1 (best) BASIC17.69■□□□□ 0.42
Sigmar1O55242 Ctnnd2-201ENSMUST00000081728 5944 ntAPPRIS P2 TSL 1 (best) BASIC17.69■□□□□ 0.42
Sigmar1O55242 Six3-201ENSMUST00000162695 2838 ntAPPRIS ALT2 TSL 5 BASIC17.69■□□□□ 0.42
Sigmar1O55242 Igfbp3-202ENSMUST00000135887 1709 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
Sigmar1O55242 Znrf2-201ENSMUST00000079869 5886 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
Sigmar1O55242 Mpp6-203ENSMUST00000166318 2222 ntTSL 1 (best) BASIC17.68■□□□□ 0.42
Sigmar1O55242 Cldnd1-201ENSMUST00000023426 2147 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
Sigmar1O55242 Slc22a17-201ENSMUST00000050772 2290 ntTSL 1 (best) BASIC17.65■□□□□ 0.42
Sigmar1O55242 Kcnc3-203ENSMUST00000207493 2731 ntAPPRIS ALT2 TSL 5 BASIC17.64■□□□□ 0.42
Sigmar1O55242 Gpr12-201ENSMUST00000036211 2219 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.42
Sigmar1O55242 Mta3-202ENSMUST00000112349 1728 ntAPPRIS ALT2 TSL 1 (best) BASIC17.63■□□□□ 0.41
Sigmar1O55242 Dyrk1b-201ENSMUST00000085901 2534 ntAPPRIS P3 TSL 1 (best) BASIC17.62■□□□□ 0.41
Sigmar1O55242 Cadm4-201ENSMUST00000068023 2161 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
Sigmar1O55242 Crim1-201ENSMUST00000112498 5995 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
Sigmar1O55242 Cadps-201ENSMUST00000067491 5421 ntAPPRIS P4 TSL 1 (best) BASIC17.61■□□□□ 0.41
Sigmar1O55242 Gm2415-204ENSMUST00000190235 2004 ntBASIC17.6■□□□□ 0.41
Sigmar1O55242 AC153890.1-201ENSMUST00000220021 2469 ntBASIC17.59■□□□□ 0.41
Sigmar1O55242 Cadps-203ENSMUST00000112658 5458 ntAPPRIS ALT2 TSL 1 (best) BASIC17.58■□□□□ 0.41
Sigmar1O55242 Dazap1-203ENSMUST00000105362 2081 ntAPPRIS P3 TSL 1 (best) BASIC17.58■□□□□ 0.4
Sigmar1O55242 Trabd-203ENSMUST00000165690 1941 ntAPPRIS P2 TSL 1 (best) BASIC17.57■□□□□ 0.4
Sigmar1O55242 Apcdd1-202ENSMUST00000163716 1888 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
Sigmar1O55242 Snta1-202ENSMUST00000109728 2131 ntAPPRIS P2 TSL 1 (best) BASIC17.57■□□□□ 0.4
Sigmar1O55242 Snta1-201ENSMUST00000028991 2125 ntAPPRIS ALT2 TSL 1 (best) BASIC17.57■□□□□ 0.4
Sigmar1O55242 Rab40c-209ENSMUST00000179998 2456 ntAPPRIS P1 TSL 5 BASIC17.57■□□□□ 0.4
Sigmar1O55242 Fam120a-201ENSMUST00000060805 5105 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
Sigmar1O55242 Tmco6-201ENSMUST00000007046 1817 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
Sigmar1O55242 C530008M17Rik-201ENSMUST00000086909 1844 ntBASIC17.53■□□□□ 0.4
Sigmar1O55242 Arl2bp-201ENSMUST00000034228 2063 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.39
Sigmar1O55242 Dcaf15-201ENSMUST00000041367 2312 ntTSL 1 (best) BASIC17.48■□□□□ 0.39
Sigmar1O55242 Iglon5-201ENSMUST00000107974 2622 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
Sigmar1O55242 Kcnc3-202ENSMUST00000107907 5281 ntAPPRIS P2 TSL 5 BASIC17.47■□□□□ 0.39
Sigmar1O55242 Fam220a-201ENSMUST00000067145 2198 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
Sigmar1O55242 Rcor2-201ENSMUST00000066646 2801 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
Sigmar1O55242 Tsc22d1-204ENSMUST00000110888 4999 ntTSL 1 (best) BASIC17.47■□□□□ 0.39
Sigmar1O55242 Gas2l1-201ENSMUST00000037146 2686 ntAPPRIS ALT2 TSL 1 (best) BASIC17.46■□□□□ 0.39
Sigmar1O55242 Dync1i1-203ENSMUST00000115556 2718 ntTSL 1 (best) BASIC17.46■□□□□ 0.39
Sigmar1O55242 Panx2-202ENSMUST00000161372 2314 ntTSL 1 (best) BASIC17.46■□□□□ 0.38
Sigmar1O55242 Tgfbrap1-202ENSMUST00000186694 5385 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
Sigmar1O55242 Homer3-206ENSMUST00000140212 2608 ntAPPRIS P3 TSL 1 (best) BASIC17.45■□□□□ 0.38
Sigmar1O55242 Atoh7-201ENSMUST00000044059 1629 ntAPPRIS P1 BASIC17.45■□□□□ 0.38
Sigmar1O55242 Tcf4-246ENSMUST00000202116 2986 ntTSL 1 (best) BASIC17.45■□□□□ 0.38
Sigmar1O55242 AC122428.3-201ENSMUST00000215551 2290 ntBASIC17.45■□□□□ 0.38
Sigmar1O55242 Tmem235-201ENSMUST00000093905 1820 ntAPPRIS P1 TSL 5 BASIC17.44■□□□□ 0.38
Sigmar1O55242 Fam168b-203ENSMUST00000167518 5058 ntTSL 5 BASIC17.44■□□□□ 0.38
Sigmar1O55242 Dtnb-203ENSMUST00000164578 2355 ntTSL 1 (best) BASIC17.44■□□□□ 0.38
Sigmar1O55242 Grin2d-201ENSMUST00000002848 5431 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
Sigmar1O55242 Dmwd-201ENSMUST00000032570 2494 ntAPPRIS P2 TSL 1 (best) BASIC17.43■□□□□ 0.38
Sigmar1O55242 Snx24-202ENSMUST00000165032 1880 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
Sigmar1O55242 Foxk2-201ENSMUST00000106113 5029 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
Sigmar1O55242 G6pc3-202ENSMUST00000078975 1573 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
Sigmar1O55242 Usp48-205ENSMUST00000105840 5741 ntAPPRIS P1 TSL 5 BASIC17.42■□□□□ 0.38
Sigmar1O55242 Maz-204ENSMUST00000206254 2282 ntTSL 5 BASIC17.41■□□□□ 0.38
Sigmar1O55242 Neurl4-211ENSMUST00000177138 4886 ntAPPRIS ALT2 TSL 1 (best) BASIC17.41■□□□□ 0.38
Sigmar1O55242 Larp4b-204ENSMUST00000188939 2658 ntTSL 1 (best) BASIC17.41■□□□□ 0.38
Sigmar1O55242 Gm15688-201ENSMUST00000161394 2418 ntTSL 1 (best) BASIC17.4■□□□□ 0.38
Sigmar1O55242 Jdp2-203ENSMUST00000177587 1645 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
Sigmar1O55242 Htra3-201ENSMUST00000087629 2750 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
Sigmar1O55242 Dedd-204ENSMUST00000111300 2563 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.38
Sigmar1O55242 Nisch-222ENSMUST00000172142 2780 ntAPPRIS ALT2 TSL 1 (best) BASIC17.39■□□□□ 0.37
Sigmar1O55242 Pan3-209ENSMUST00000176600 5541 ntAPPRIS ALT2 TSL 5 BASIC17.39■□□□□ 0.37
Sigmar1O55242 D130020L05Rik-201ENSMUST00000180800 2431 ntTSL 1 (best) BASIC17.39■□□□□ 0.37
Sigmar1O55242 Kcna7-201ENSMUST00000107774 2182 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
Sigmar1O55242 Taf4-201ENSMUST00000041618 4416 ntAPPRIS P2 TSL 1 (best) BASIC17.38■□□□□ 0.37
Sigmar1O55242 Zfp787-201ENSMUST00000094870 1897 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
Sigmar1O55242 Pou4f1-201ENSMUST00000053016 4445 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
Sigmar1O55242 Wwc1-201ENSMUST00000018993 4531 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
Sigmar1O55242 Olfm1-201ENSMUST00000028177 2757 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
Sigmar1O55242 Rgs7-206ENSMUST00000194555 2431 ntAPPRIS ALT2 TSL 1 (best) BASIC17.37■□□□□ 0.37
Sigmar1O55242 March9-201ENSMUST00000040307 3037 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
Sigmar1O55242 Ppp1r3e-202ENSMUST00000177403 1957 ntAPPRIS P1 TSL 5 BASIC17.36■□□□□ 0.37
Sigmar1O55242 Mef2a-203ENSMUST00000076325 2664 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
Sigmar1O55242 Ppp1cc-202ENSMUST00000102528 2384 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
Sigmar1O55242 Tmcc1-202ENSMUST00000088896 5838 ntAPPRIS P2 TSL 1 (best) BASIC17.34■□□□□ 0.37
Sigmar1O55242 2410017I17Rik-202ENSMUST00000090537 2053 ntTSL 2 BASIC17.34■□□□□ 0.37
Sigmar1O55242 Hoxb3-202ENSMUST00000093944 3190 ntAPPRIS P1 TSL 5 BASIC17.34■□□□□ 0.37
Sigmar1O55242 Cdr2-201ENSMUST00000033169 2525 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
Sigmar1O55242 Fezf2-202ENSMUST00000224023 1917 ntBASIC17.31■□□□□ 0.36
Retrieved 100 of 76,532 protein–RNA pairs in 26.5 ms