Protein–RNA interactions for Protein: O54991

Cntnap1, Contactin-associated protein 1, mousemouse

Predictions only

Length 1,385 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cntnap1O54991 C1qtnf5-201ENSMUST00000114815 1215 ntAPPRIS P1 TSL 1 (best) BASIC36.61■■■■□ 3.45
Cntnap1O54991 Bcl7c-207ENSMUST00000207019 654 ntTSL 3 BASIC36.6■■■■□ 3.45
Cntnap1O54991 Six2-201ENSMUST00000024947 1812 ntAPPRIS P1 TSL 1 (best) BASIC36.58■■■■□ 3.45
Cntnap1O54991 C2cd4d-201ENSMUST00000169433 1321 ntAPPRIS P1 TSL 3 BASIC36.57■■■■□ 3.45
Cntnap1O54991 Cetn4-202ENSMUST00000075537 762 ntTSL 3 BASIC36.56■■■■□ 3.44
Cntnap1O54991 Mbd2-201ENSMUST00000074058 1953 ntAPPRIS P1 TSL 1 (best) BASIC36.56■■■■□ 3.44
Cntnap1O54991 Gm17110-201ENSMUST00000171248 735 ntTSL 3 BASIC36.52■■■■□ 3.44
Cntnap1O54991 Gm42596-201ENSMUST00000196305 1958 ntBASIC36.52■■■■□ 3.44
Cntnap1O54991 Qrich1-209ENSMUST00000194385 975 ntTSL 2 BASIC36.51■■■■□ 3.43
Cntnap1O54991 Tsen34-203ENSMUST00000108629 1238 ntTSL 1 (best) BASIC36.5■■■■□ 3.43
Cntnap1O54991 Orai1-201ENSMUST00000051016 1482 ntAPPRIS P1 TSL 1 (best) BASIC36.49■■■■□ 3.43
Cntnap1O54991 Uba52-207ENSMUST00000140679 697 ntAPPRIS P1 TSL 2 BASIC36.47■■■■□ 3.43
Cntnap1O54991 Gm5601-202ENSMUST00000207161 1437 ntTSL 1 (best) BASIC36.45■■■■□ 3.43
Cntnap1O54991 Mkrn1-202ENSMUST00000051671 1511 ntTSL 1 (best) BASIC36.45■■■■□ 3.42
Cntnap1O54991 Dedd-201ENSMUST00000064950 1618 ntAPPRIS P1 TSL 1 (best) BASIC36.44■■■■□ 3.42
Cntnap1O54991 Capns1-201ENSMUST00000001845 1600 ntAPPRIS P2 TSL 5 BASIC36.44■■■■□ 3.42
Cntnap1O54991 Sh3glb2-201ENSMUST00000028214 1810 ntAPPRIS P1 TSL 1 (best) BASIC36.43■■■■□ 3.42
Cntnap1O54991 Gm12523-201ENSMUST00000148844 599 ntTSL 5 BASIC36.42■■■■□ 3.42
Cntnap1O54991 Gm10524-201ENSMUST00000181931 1893 ntBASIC36.41■■■■□ 3.42
Cntnap1O54991 Popdc3-202ENSMUST00000161803 1369 ntTSL 1 (best) BASIC36.41■■■■□ 3.42
Cntnap1O54991 Zfyve21-201ENSMUST00000021714 1308 ntAPPRIS P2 TSL 1 (best) BASIC36.41■■■■□ 3.42
Cntnap1O54991 Rab22a-202ENSMUST00000109110 849 ntTSL 5 BASIC36.4■■■■□ 3.42
Cntnap1O54991 A530058N18Rik-207ENSMUST00000152254 1211 ntTSL 1 (best) BASIC36.31■■■■□ 3.4
Cntnap1O54991 CT025624.2-201ENSMUST00000223609 1909 ntBASIC36.3■■■■□ 3.4
Cntnap1O54991 1810026B05Rik-202ENSMUST00000184554 782 ntTSL 3 BASIC36.26■■■■□ 3.39
Cntnap1O54991 BC037032-205ENSMUST00000187080 508 ntTSL 5 BASIC36.25■■■■□ 3.39
Cntnap1O54991 Nt5dc2-204ENSMUST00000227096 1848 ntAPPRIS P5 BASIC36.25■■■■□ 3.39
Cntnap1O54991 Abhd17a-204ENSMUST00000191440 1529 ntTSL 1 (best) BASIC36.24■■■■□ 3.39
Cntnap1O54991 Fbxo6-201ENSMUST00000030858 1346 ntAPPRIS P1 TSL 1 (best) BASIC36.21■■■■□ 3.39
Cntnap1O54991 Stradb-202ENSMUST00000114296 1348 ntTSL 1 (best) BASIC36.18■■■■□ 3.38
Cntnap1O54991 Nfix-202ENSMUST00000099070 1728 ntAPPRIS P1 TSL 1 (best) BASIC36.18■■■■□ 3.38
Cntnap1O54991 Gm8503-201ENSMUST00000118131 455 ntBASIC36.15■■■■□ 3.38
Cntnap1O54991 4930542C12Rik-201ENSMUST00000171096 1203 ntBASIC36.15■■■■□ 3.38
Cntnap1O54991 Carnmt1-201ENSMUST00000025632 2090 ntAPPRIS P1 TSL 1 (best) BASIC36.14■■■■□ 3.38
Cntnap1O54991 Naa20-201ENSMUST00000002805 1172 ntTSL 1 (best) BASIC36.13■■■■□ 3.37
Cntnap1O54991 March2-205ENSMUST00000173015 1418 ntTSL 3 BASIC36.1■■■■□ 3.37
Cntnap1O54991 Cenpv-201ENSMUST00000018653 1032 ntAPPRIS P1 TSL 1 (best) BASIC36.1■■■■□ 3.37
Cntnap1O54991 Gm9939-201ENSMUST00000067161 1154 ntBASIC36.1■■■■□ 3.37
Cntnap1O54991 1810026B05Rik-206ENSMUST00000187421 519 ntTSL 3 BASIC36.02■■■■□ 3.36
Cntnap1O54991 G6pc3-202ENSMUST00000078975 1573 ntAPPRIS P1 TSL 1 (best) BASIC36.02■■■■□ 3.36
Cntnap1O54991 Nkx3-2-201ENSMUST00000060820 1718 ntAPPRIS P1 TSL 1 (best) BASIC35.99■■■■□ 3.35
Cntnap1O54991 Macrod2-205ENSMUST00000110063 845 ntTSL 5 BASIC35.99■■■■□ 3.35
Cntnap1O54991 Kcnmb4os2-201ENSMUST00000080943 1571 ntTSL 5 BASIC35.98■■■■□ 3.35
Cntnap1O54991 Macrod1-201ENSMUST00000040261 1274 ntAPPRIS P1 TSL 1 (best) BASIC35.98■■■■□ 3.35
Cntnap1O54991 Gm24970-201ENSMUST00000175582 82 ntBASIC35.94■■■■□ 3.34
Cntnap1O54991 Poldip2-201ENSMUST00000001127 2054 ntAPPRIS P1 TSL 1 (best) BASIC35.94■■■■□ 3.34
Cntnap1O54991 Anapc11-202ENSMUST00000093140 962 ntAPPRIS P1 TSL 1 (best) BASIC35.91■■■■□ 3.34
Cntnap1O54991 Stard3nl-210ENSMUST00000222869 1030 ntTSL 5 BASIC35.88■■■■□ 3.33
Cntnap1O54991 Six2-202ENSMUST00000163568 2119 ntAPPRIS P1 TSL 1 (best) BASIC35.87■■■■□ 3.33
Cntnap1O54991 Scx-201ENSMUST00000043089 1136 ntAPPRIS P1 TSL 1 (best) BASIC35.85■■■■□ 3.33
Cntnap1O54991 Syt7-201ENSMUST00000073899 1605 ntAPPRIS P1 TSL 1 (best) BASIC35.83■■■■□ 3.33
Cntnap1O54991 Trp53rkb-202ENSMUST00000065753 1375 ntTSL 1 (best) BASIC35.83■■■■□ 3.33
Cntnap1O54991 Gm42517-201ENSMUST00000197216 1850 ntAPPRIS P1 BASIC35.8■■■■□ 3.32
Cntnap1O54991 Gm6821-201ENSMUST00000107540 542 ntBASIC35.78■■■■□ 3.32
Cntnap1O54991 Eif5a-201ENSMUST00000043419 1437 ntAPPRIS P1 TSL 1 (best) BASIC35.78■■■■□ 3.32
Cntnap1O54991 Tmem243-201ENSMUST00000115365 1040 ntAPPRIS P1 TSL 2 BASIC35.76■■■■□ 3.31
Cntnap1O54991 Dtnbp1-202ENSMUST00000110128 1305 ntAPPRIS ALT2 TSL 5 BASIC35.74■■■■□ 3.31
Cntnap1O54991 Tada2b-202ENSMUST00000119916 1321 ntTSL 5 BASIC35.74■■■■□ 3.31
Cntnap1O54991 Trp53i13-201ENSMUST00000060417 1463 ntAPPRIS P2 TSL 1 (best) BASIC35.72■■■■□ 3.31
Cntnap1O54991 Gnai2-202ENSMUST00000192615 1777 ntAPPRIS P1 TSL 1 (best) BASIC35.71■■■■□ 3.31
Cntnap1O54991 Dlx6os2-201ENSMUST00000178206 1354 ntBASIC35.7■■■■□ 3.31
Cntnap1O54991 Hspb1-202ENSMUST00000111155 930 ntTSL 1 (best) BASIC35.7■■■■□ 3.31
Cntnap1O54991 Cdk9-201ENSMUST00000009699 1733 ntAPPRIS P1 TSL 1 (best) BASIC35.67■■■■□ 3.3
Cntnap1O54991 Rab12-205ENSMUST00000167962 2010 ntAPPRIS P2 TSL 1 (best) BASIC35.66■■■■□ 3.3
Cntnap1O54991 Crlf1-201ENSMUST00000008032 1644 ntAPPRIS P1 TSL 1 (best) BASIC35.59■■■■□ 3.29
Cntnap1O54991 Guk1-204ENSMUST00000170202 1078 ntAPPRIS P1 TSL 1 (best) BASIC35.58■■■■□ 3.29
Cntnap1O54991 Tceal5-201ENSMUST00000066819 1044 ntAPPRIS P1 TSL 1 (best) BASIC35.58■■■■□ 3.29
Cntnap1O54991 Zfp131-207ENSMUST00000224946 1783 ntBASIC35.56■■■■□ 3.28
Cntnap1O54991 Gm28592-201ENSMUST00000186844 741 ntTSL 5 BASIC35.47■■■■□ 3.27
Cntnap1O54991 Samd1-201ENSMUST00000095228 2071 ntAPPRIS P1 TSL 5 BASIC35.46■■■■□ 3.27
Cntnap1O54991 Mipep-204ENSMUST00000225043 1548 ntBASIC35.44■■■■□ 3.26
Cntnap1O54991 Jdp2-203ENSMUST00000177587 1645 ntAPPRIS P1 TSL 1 (best) BASIC35.42■■■■□ 3.26
Cntnap1O54991 Kras-207ENSMUST00000203147 817 ntTSL 5 BASIC35.41■■■■□ 3.26
Cntnap1O54991 Znrf3-202ENSMUST00000143746 1022 ntTSL 1 (best) BASIC35.34■■■■□ 3.25
Cntnap1O54991 Tcte3-201ENSMUST00000040746 788 ntAPPRIS P1 TSL 1 (best) BASIC35.32■■■■□ 3.24
Cntnap1O54991 Tcte3-202ENSMUST00000097398 632 ntTSL 1 (best) BASIC35.32■■■■□ 3.24
Cntnap1O54991 Rab43-202ENSMUST00000032135 1262 ntTSL 1 (best) BASIC35.3■■■■□ 3.24
Cntnap1O54991 Fbxo6-203ENSMUST00000105706 1938 ntAPPRIS P1 TSL 1 (best) BASIC35.29■■■■□ 3.24
Cntnap1O54991 Abhd17a-201ENSMUST00000003436 1468 ntAPPRIS P1 TSL 1 (best) BASIC35.28■■■■□ 3.24
Cntnap1O54991 Hrh3-208ENSMUST00000171736 906 ntTSL 5 BASIC35.26■■■■□ 3.24
Cntnap1O54991 Lmo2-201ENSMUST00000111139 1434 ntTSL 5 BASIC35.26■■■■□ 3.24
Cntnap1O54991 Rab12-201ENSMUST00000070538 2057 ntAPPRIS ALT2 TSL 1 (best) BASIC35.25■■■■□ 3.23
Cntnap1O54991 Snrpe-202ENSMUST00000164574 597 ntTSL 3 BASIC35.24■■■■□ 3.23
Cntnap1O54991 Wtip-201ENSMUST00000038537 1962 ntAPPRIS P1 TSL 1 (best) BASIC35.23■■■■□ 3.23
Cntnap1O54991 Uba52-205ENSMUST00000129909 705 ntAPPRIS P1 TSL 2 BASIC35.23■■■■□ 3.23
Cntnap1O54991 Ube2q2-202ENSMUST00000121677 1680 ntAPPRIS ALT2 TSL 5 BASIC35.22■■■■□ 3.23
Cntnap1O54991 Junos-204ENSMUST00000128094 830 ntTSL 1 (best) BASIC35.22■■■■□ 3.23
Cntnap1O54991 Ube2f-202ENSMUST00000171112 1547 ntAPPRIS P1 TSL 1 (best) BASIC35.21■■■■□ 3.23
Cntnap1O54991 Dapk3-209ENSMUST00000219850 1482 ntAPPRIS P1 TSL 1 (best) BASIC35.2■■■■□ 3.23
Cntnap1O54991 Lrrc1-204ENSMUST00000183734 2113 ntTSL 1 (best) BASIC35.2■■■■□ 3.22
Cntnap1O54991 1700084E18Rik-202ENSMUST00000205624 729 ntBASIC35.19■■■■□ 3.22
Cntnap1O54991 1700003F12Rik-202ENSMUST00000109709 704 ntAPPRIS ALT2 TSL 3 BASIC35.17■■■■□ 3.22
Cntnap1O54991 1700003F12Rik-201ENSMUST00000045116 704 ntAPPRIS P2 TSL 1 (best) BASIC35.17■■■■□ 3.22
Cntnap1O54991 Nemp1-202ENSMUST00000118612 1522 ntTSL 1 (best) BASIC35.15■■■■□ 3.22
Cntnap1O54991 Tbcel-204ENSMUST00000128959 1535 ntAPPRIS P1 TSL 5 BASIC35.15■■■■□ 3.22
Cntnap1O54991 E330040D14Rik-201ENSMUST00000192299 1374 ntBASIC35.15■■■■□ 3.22
Cntnap1O54991 Vsig8-202ENSMUST00000177086 1519 ntTSL 1 (best) BASIC35.13■■■■□ 3.21
Cntnap1O54991 Gm42809-201ENSMUST00000198429 1138 ntBASIC35.13■■■■□ 3.21
Cntnap1O54991 Shf-201ENSMUST00000048635 1431 ntAPPRIS P2 TSL 1 (best) BASIC35.1■■■■□ 3.21
Cntnap1O54991 Hnrnpd-202ENSMUST00000072750 1537 ntAPPRIS ALT2 TSL 3 BASIC35.09■■■■□ 3.21
Retrieved 100 of 76,532 protein–RNA pairs in 13.6 ms