Protein–RNA interactions for Protein: O09111

Ndufb11, NADH dehydrogenase [ubiquinone] 1 beta subcomplex subunit 11, mitochondrial, mousemouse

Predictions only

Length 151 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ndufb11O09111 Zswim6-201ENSMUST00000105097 5456 ntTSL 5 BASIC21■□□□□ 0.95
Ndufb11O09111 Gm43445-201ENSMUST00000198564 2091 ntBASIC21■□□□□ 0.95
Ndufb11O09111 Gm960-204ENSMUST00000225896 2202 ntAPPRIS ALT2 BASIC21■□□□□ 0.95
Ndufb11O09111 Ctbp1-201ENSMUST00000079746 2279 ntAPPRIS P3 TSL 1 (best) BASIC20.99■□□□□ 0.95
Ndufb11O09111 Kcnmb4-201ENSMUST00000068233 1367 ntAPPRIS P1 TSL 1 (best) BASIC20.98■□□□□ 0.95
Ndufb11O09111 Prr3-201ENSMUST00000055454 2727 ntAPPRIS P3 TSL 1 (best) BASIC20.97■□□□□ 0.95
Ndufb11O09111 Cnnm3-201ENSMUST00000001166 5193 ntAPPRIS P4 TSL 1 (best) BASIC20.96■□□□□ 0.95
Ndufb11O09111 Cnnm3-202ENSMUST00000097776 5292 ntAPPRIS ALT2 TSL 1 (best) BASIC20.96■□□□□ 0.95
Ndufb11O09111 Adgrb1-203ENSMUST00000185682 2744 ntTSL 1 (best) BASIC20.93■□□□□ 0.94
Ndufb11O09111 Rnf19b-201ENSMUST00000030584 2414 ntAPPRIS ALT2 TSL 5 BASIC20.93■□□□□ 0.94
Ndufb11O09111 Nemp1-202ENSMUST00000118612 1522 ntTSL 1 (best) BASIC20.93■□□□□ 0.94
Ndufb11O09111 Nt5dc2-204ENSMUST00000227096 1848 ntAPPRIS P5 BASIC20.91■□□□□ 0.94
Ndufb11O09111 Ier5l-201ENSMUST00000065134 2683 ntAPPRIS P1 BASIC20.89■□□□□ 0.93
Ndufb11O09111 Tpm1-216ENSMUST00000113707 1898 ntTSL 1 (best) BASIC20.88■□□□□ 0.93
Ndufb11O09111 Igfbp3-202ENSMUST00000135887 1709 ntAPPRIS P1 TSL 1 (best) BASIC20.88■□□□□ 0.93
Ndufb11O09111 Irx4-201ENSMUST00000022095 2589 ntAPPRIS P1 TSL 1 (best) BASIC20.86■□□□□ 0.93
Ndufb11O09111 Arhgdia-201ENSMUST00000067936 2150 ntAPPRIS P1 TSL 1 (best) BASIC20.86■□□□□ 0.93
Ndufb11O09111 Amer2-203ENSMUST00000225247 2662 ntBASIC20.84■□□□□ 0.93
Ndufb11O09111 Sh3rf1-201ENSMUST00000034060 5479 ntAPPRIS P1 TSL 1 (best) BASIC20.84■□□□□ 0.93
Ndufb11O09111 Clk2-202ENSMUST00000121212 2154 ntAPPRIS P3 TSL 1 (best) BASIC20.84■□□□□ 0.93
Ndufb11O09111 Galnt10-202ENSMUST00000108846 1745 ntTSL 1 (best) BASIC20.84■□□□□ 0.93
Ndufb11O09111 Efna3-201ENSMUST00000029673 2363 ntAPPRIS P2 TSL 1 (best) BASIC20.83■□□□□ 0.93
Ndufb11O09111 Tmem59-201ENSMUST00000030361 1775 ntAPPRIS P1 TSL 1 (best) BASIC20.83■□□□□ 0.93
Ndufb11O09111 Kansl2-201ENSMUST00000023727 2311 ntAPPRIS ALT2 TSL 5 BASIC20.83■□□□□ 0.92
Ndufb11O09111 Pfn2-202ENSMUST00000119344 1879 ntTSL 1 (best) BASIC20.81■□□□□ 0.92
Ndufb11O09111 Ttc19-202ENSMUST00000101075 2193 ntAPPRIS ALT2 TSL 1 (best) BASIC20.81■□□□□ 0.92
Ndufb11O09111 Pon2-201ENSMUST00000057792 2409 ntAPPRIS P1 TSL 1 (best) BASIC20.81■□□□□ 0.92
Ndufb11O09111 Ildr2-205ENSMUST00000193860 2320 ntTSL 1 (best) BASIC20.81■□□□□ 0.92
Ndufb11O09111 Ric1-206ENSMUST00000162184 2157 ntTSL 1 (best) BASIC20.8■□□□□ 0.92
Ndufb11O09111 Rab40c-209ENSMUST00000179998 2456 ntAPPRIS P1 TSL 5 BASIC20.79■□□□□ 0.92
Ndufb11O09111 Hoxc13-201ENSMUST00000001700 2461 ntAPPRIS P1 TSL 1 (best) BASIC20.78■□□□□ 0.92
Ndufb11O09111 Fezf2-202ENSMUST00000224023 1917 ntBASIC20.77■□□□□ 0.92
Ndufb11O09111 2410017I17Rik-202ENSMUST00000090537 2053 ntTSL 2 BASIC20.77■□□□□ 0.92
Ndufb11O09111 Mpp6-203ENSMUST00000166318 2222 ntTSL 1 (best) BASIC20.75■□□□□ 0.91
Ndufb11O09111 Rcor2-201ENSMUST00000066646 2801 ntAPPRIS P1 TSL 1 (best) BASIC20.74■□□□□ 0.91
Ndufb11O09111 Rbfox2-201ENSMUST00000048145 1720 ntTSL 1 (best) BASIC20.74■□□□□ 0.91
Ndufb11O09111 Stard10-201ENSMUST00000032927 1400 ntAPPRIS P1 TSL 1 (best) BASIC20.73■□□□□ 0.91
Ndufb11O09111 Mypop-203ENSMUST00000131087 1951 ntAPPRIS P1 TSL 5 BASIC20.73■□□□□ 0.91
Ndufb11O09111 Gsk3a-202ENSMUST00000108411 2248 ntAPPRIS ALT2 TSL 5 BASIC20.73■□□□□ 0.91
Ndufb11O09111 Ildr2-207ENSMUST00000195557 1947 ntAPPRIS ALT2 TSL 1 (best) BASIC20.72■□□□□ 0.91
Ndufb11O09111 Rgs7-206ENSMUST00000194555 2431 ntAPPRIS ALT2 TSL 1 (best) BASIC20.72■□□□□ 0.91
Ndufb11O09111 Hdgf-201ENSMUST00000005017 2245 ntAPPRIS P1 TSL 1 (best) BASIC20.71■□□□□ 0.91
Ndufb11O09111 Lactb-202ENSMUST00000215172 1806 ntTSL 1 (best) BASIC20.71■□□□□ 0.91
Ndufb11O09111 Rnf220-212ENSMUST00000221654 1949 ntTSL 1 (best) BASIC20.7■□□□□ 0.9
Ndufb11O09111 Arx-202ENSMUST00000113947 2454 ntAPPRIS P1 TSL 1 (best) BASIC20.69■□□□□ 0.9
Ndufb11O09111 Fam220a-206ENSMUST00000196487 2278 ntAPPRIS P1 TSL 1 (best) BASIC20.68■□□□□ 0.9
Ndufb11O09111 Ywhah-201ENSMUST00000019109 1764 ntAPPRIS P1 TSL 1 (best) BASIC20.68■□□□□ 0.9
Ndufb11O09111 Gm45716-202ENSMUST00000134929 2031 ntAPPRIS P1 TSL 1 (best) BASIC20.68■□□□□ 0.9
Ndufb11O09111 Ebag9-203ENSMUST00000227691 1945 ntAPPRIS P1 BASIC20.67■□□□□ 0.9
Ndufb11O09111 Fam220a-205ENSMUST00000169329 2331 ntAPPRIS P1 TSL 1 (best) BASIC20.67■□□□□ 0.9
Ndufb11O09111 Irf2bp2-201ENSMUST00000054960 5080 ntAPPRIS P1 TSL 2 BASIC20.67■□□□□ 0.9
Ndufb11O09111 Clk2-203ENSMUST00000121931 2112 ntAPPRIS ALT1 TSL 5 BASIC20.66■□□□□ 0.9
Ndufb11O09111 Klhl25-205ENSMUST00000206019 2299 ntAPPRIS P1 TSL 1 (best) BASIC20.66■□□□□ 0.9
Ndufb11O09111 Marveld2-202ENSMUST00000163163 2187 ntTSL 1 (best) BASIC20.66■□□□□ 0.9
Ndufb11O09111 Rnf149-201ENSMUST00000062525 2492 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
Ndufb11O09111 Lactb-201ENSMUST00000034929 2031 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
Ndufb11O09111 Fam168b-201ENSMUST00000047534 5030 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.9
Ndufb11O09111 Gpr12-201ENSMUST00000036211 2219 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.89
Ndufb11O09111 AC153890.1-201ENSMUST00000220021 2469 ntBASIC20.64■□□□□ 0.89
Ndufb11O09111 Pfdn2-202ENSMUST00000135941 1735 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.89
Ndufb11O09111 Raly-201ENSMUST00000029120 1802 ntAPPRIS ALT2 TSL 5 BASIC20.63■□□□□ 0.89
Ndufb11O09111 Kcna7-201ENSMUST00000107774 2182 ntAPPRIS P1 TSL 1 (best) BASIC20.63■□□□□ 0.89
Ndufb11O09111 Atp5a1-202ENSMUST00000114748 2674 ntTSL 1 (best) BASIC20.61■□□□□ 0.89
Ndufb11O09111 Panx2-202ENSMUST00000161372 2314 ntTSL 1 (best) BASIC20.6■□□□□ 0.89
Ndufb11O09111 Pwwp2a-202ENSMUST00000094294 1814 ntTSL 5 BASIC20.6■□□□□ 0.89
Ndufb11O09111 Agap3-201ENSMUST00000024123 3207 ntAPPRIS P1 TSL 1 (best) BASIC20.59■□□□□ 0.89
Ndufb11O09111 Jag2-201ENSMUST00000075827 5106 ntAPPRIS P1 TSL 1 (best) BASIC20.58■□□□□ 0.89
Ndufb11O09111 Maz-204ENSMUST00000206254 2282 ntTSL 5 BASIC20.57■□□□□ 0.88
Ndufb11O09111 Smad7-202ENSMUST00000168918 1882 ntAPPRIS P1 TSL 1 (best) BASIC20.56■□□□□ 0.88
Ndufb11O09111 Gnaq-201ENSMUST00000025541 5644 ntAPPRIS P1 TSL 1 (best) BASIC20.55■□□□□ 0.88
Ndufb11O09111 Ubp1-203ENSMUST00000116492 2111 ntAPPRIS ALT1 TSL 1 (best) BASIC20.54■□□□□ 0.88
Ndufb11O09111 Cd63-201ENSMUST00000026407 1063 ntAPPRIS P1 TSL 1 (best) BASIC20.54■□□□□ 0.88
Ndufb11O09111 Gnai2-202ENSMUST00000192615 1777 ntAPPRIS P1 TSL 1 (best) BASIC20.52■□□□□ 0.88
Ndufb11O09111 Scrt2-201ENSMUST00000064061 3395 ntAPPRIS P1 TSL 5 BASIC20.52■□□□□ 0.88
Ndufb11O09111 Grb2-202ENSMUST00000106495 2041 ntTSL 5 BASIC20.51■□□□□ 0.87
Ndufb11O09111 Lrrc4b-201ENSMUST00000058667 2728 ntAPPRIS P1 TSL 1 (best) BASIC20.5■□□□□ 0.87
Ndufb11O09111 Kcnq5-206ENSMUST00000173404 2775 ntAPPRIS ALT2 TSL 5 BASIC20.5■□□□□ 0.87
Ndufb11O09111 Lpcat4-201ENSMUST00000028554 2275 ntAPPRIS P1 TSL 1 (best) BASIC20.5■□□□□ 0.87
Ndufb11O09111 4921531C22Rik-201ENSMUST00000150145 1905 ntTSL 1 (best) BASIC20.5■□□□□ 0.87
Ndufb11O09111 Snta1-202ENSMUST00000109728 2131 ntAPPRIS P2 TSL 1 (best) BASIC20.49■□□□□ 0.87
Ndufb11O09111 Snta1-201ENSMUST00000028991 2125 ntAPPRIS ALT2 TSL 1 (best) BASIC20.49■□□□□ 0.87
Ndufb11O09111 Rcan1-202ENSMUST00000060005 2324 ntTSL 1 (best) BASIC20.48■□□□□ 0.87
Ndufb11O09111 Neurog2-201ENSMUST00000029587 2227 ntAPPRIS P1 TSL 1 (best) BASIC20.47■□□□□ 0.87
Ndufb11O09111 Fcho2-203ENSMUST00000109403 1523 ntTSL 5 BASIC20.47■□□□□ 0.87
Ndufb11O09111 Gas2l1-201ENSMUST00000037146 2686 ntAPPRIS ALT2 TSL 1 (best) BASIC20.46■□□□□ 0.87
Ndufb11O09111 E2f1-201ENSMUST00000000894 2755 ntAPPRIS ALT2 TSL 1 (best) BASIC20.46■□□□□ 0.87
Ndufb11O09111 Cited2-203ENSMUST00000219558 2411 ntAPPRIS P1 BASIC20.45■□□□□ 0.86
Ndufb11O09111 Heca-201ENSMUST00000037879 5098 ntAPPRIS P1 TSL 1 (best) BASIC20.45■□□□□ 0.86
Ndufb11O09111 Trp53i13-201ENSMUST00000060417 1463 ntAPPRIS P2 TSL 1 (best) BASIC20.44■□□□□ 0.86
Ndufb11O09111 Raly-204ENSMUST00000116389 1759 ntAPPRIS ALT2 TSL 5 BASIC20.44■□□□□ 0.86
Ndufb11O09111 Zfp131-207ENSMUST00000224946 1783 ntBASIC20.43■□□□□ 0.86
Ndufb11O09111 AC153911.1-202ENSMUST00000218534 1034 ntBASIC20.42■□□□□ 0.86
Ndufb11O09111 E2f6-201ENSMUST00000020908 2418 ntAPPRIS P1 TSL 1 (best) BASIC20.41■□□□□ 0.86
Ndufb11O09111 Ica1-201ENSMUST00000038403 2075 ntAPPRIS P2 TSL 1 (best) BASIC20.41■□□□□ 0.86
Ndufb11O09111 Fam220a-204ENSMUST00000119488 2202 ntTSL 1 (best) BASIC20.39■□□□□ 0.86
Ndufb11O09111 Fam220a-209ENSMUST00000200267 2202 ntAPPRIS P1 TSL 1 (best) BASIC20.39■□□□□ 0.86
Ndufb11O09111 Ring1-201ENSMUST00000025183 2034 ntAPPRIS P1 TSL 1 (best) BASIC20.39■□□□□ 0.86
Ndufb11O09111 Zfp91-201ENSMUST00000038627 5531 ntAPPRIS P1 TSL 1 (best) BASIC20.39■□□□□ 0.86
Ndufb11O09111 Phf10-201ENSMUST00000024657 1663 ntAPPRIS P1 TSL 1 (best) BASIC20.38■□□□□ 0.85
Ndufb11O09111 Terf2-201ENSMUST00000068388 1915 ntAPPRIS ALT2 TSL 1 (best) BASIC20.37■□□□□ 0.85
Retrieved 100 of 76,532 protein–RNA pairs in 8.5 ms