Protein–RNA interactions for Protein: J3QP07

B020004C17Rik, RIKEN cDNA B020004C17 gene, mousemouse

Predictions only

Length 232 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
B020004C17RikJ3QP07 9230104M06Rik-201ENSMUST00000180971 1963 ntBASIC30.61■■■□□ 2.49
B020004C17RikJ3QP07 Nrtn-201ENSMUST00000044752 1023 ntAPPRIS P1 TSL 1 (best) BASIC30.6■■■□□ 2.49
B020004C17RikJ3QP07 Casp9-202ENSMUST00000097805 1498 ntTSL 1 (best) BASIC30.6■■■□□ 2.49
B020004C17RikJ3QP07 Gm5601-202ENSMUST00000207161 1437 ntTSL 1 (best) BASIC30.59■■■□□ 2.49
B020004C17RikJ3QP07 Tmeff1-202ENSMUST00000123476 1224 ntAPPRIS P1 TSL 1 (best) BASIC30.56■■■□□ 2.48
B020004C17RikJ3QP07 1190005I06Rik-201ENSMUST00000123927 844 ntAPPRIS P2 TSL 1 (best) BASIC30.56■■■□□ 2.48
B020004C17RikJ3QP07 Shf-201ENSMUST00000048635 1431 ntAPPRIS P2 TSL 1 (best) BASIC30.55■■■□□ 2.48
B020004C17RikJ3QP07 Gm42517-201ENSMUST00000197216 1850 ntAPPRIS P1 BASIC30.53■■■□□ 2.48
B020004C17RikJ3QP07 AC150314.2-201ENSMUST00000214135 834 ntTSL 5 BASIC30.53■■■□□ 2.48
B020004C17RikJ3QP07 Ube2q2-202ENSMUST00000121677 1680 ntAPPRIS ALT2 TSL 5 BASIC30.51■■■□□ 2.47
B020004C17RikJ3QP07 Syt7-201ENSMUST00000073899 1605 ntAPPRIS P1 TSL 1 (best) BASIC30.48■■■□□ 2.47
B020004C17RikJ3QP07 A530058N18Rik-201ENSMUST00000128469 646 ntTSL 2 BASIC30.47■■■□□ 2.47
B020004C17RikJ3QP07 Kcnmb4os2-201ENSMUST00000080943 1571 ntTSL 5 BASIC30.46■■■□□ 2.47
B020004C17RikJ3QP07 Tnfsfm13-201ENSMUST00000108649 1049 ntAPPRIS ALT2 TSL 5 BASIC30.44■■■□□ 2.46
B020004C17RikJ3QP07 Gm45855-201ENSMUST00000212546 880 ntBASIC30.42■■■□□ 2.46
B020004C17RikJ3QP07 Tmem259-201ENSMUST00000052885 2225 ntAPPRIS P1 TSL 1 (best) BASIC30.41■■■□□ 2.46
B020004C17RikJ3QP07 Crlf1-201ENSMUST00000008032 1644 ntAPPRIS P1 TSL 1 (best) BASIC30.39■■■□□ 2.46
B020004C17RikJ3QP07 Dtnbp1-201ENSMUST00000072329 1362 ntAPPRIS P2 TSL 1 (best) BASIC30.38■■■□□ 2.45
B020004C17RikJ3QP07 Dapk3-209ENSMUST00000219850 1482 ntAPPRIS P1 TSL 1 (best) BASIC30.38■■■□□ 2.45
B020004C17RikJ3QP07 Zic2-201ENSMUST00000075888 2440 ntAPPRIS P1 TSL 1 (best) BASIC30.37■■■□□ 2.45
B020004C17RikJ3QP07 A530058N18Rik-207ENSMUST00000152254 1211 ntTSL 1 (best) BASIC30.36■■■□□ 2.45
B020004C17RikJ3QP07 Pkdcc-204ENSMUST00000170794 2446 ntAPPRIS P1 TSL 1 (best) BASIC30.35■■■□□ 2.45
B020004C17RikJ3QP07 Cdk2ap1-201ENSMUST00000031341 1315 ntAPPRIS P2 TSL 1 (best) BASIC30.34■■■□□ 2.45
B020004C17RikJ3QP07 Smarcc2-205ENSMUST00000218228 603 ntTSL 5 BASIC30.34■■■□□ 2.45
B020004C17RikJ3QP07 Ccm2l-201ENSMUST00000109800 2158 ntAPPRIS P1 TSL 5 BASIC30.34■■■□□ 2.45
B020004C17RikJ3QP07 Hoxa13-201ENSMUST00000047993 1309 ntAPPRIS ALT2 TSL 5 BASIC30.3■■■□□ 2.44
B020004C17RikJ3QP07 Rnf215-201ENSMUST00000003677 1874 ntAPPRIS P1 TSL 1 (best) BASIC30.3■■■□□ 2.44
B020004C17RikJ3QP07 4932443I19Rik-201ENSMUST00000166277 799 ntAPPRIS P2 TSL 1 (best) BASIC30.28■■■□□ 2.44
B020004C17RikJ3QP07 Trp53rkb-202ENSMUST00000065753 1375 ntTSL 1 (best) BASIC30.28■■■□□ 2.44
B020004C17RikJ3QP07 Atp1b3-201ENSMUST00000034983 1994 ntAPPRIS P1 TSL 1 (best) BASIC30.26■■■□□ 2.44
B020004C17RikJ3QP07 Abhd17a-201ENSMUST00000003436 1468 ntAPPRIS P1 TSL 1 (best) BASIC30.25■■■□□ 2.43
B020004C17RikJ3QP07 Gm9397-201ENSMUST00000200125 605 ntBASIC30.25■■■□□ 2.43
B020004C17RikJ3QP07 Aard-201ENSMUST00000090025 1348 ntAPPRIS P1 TSL 1 (best) BASIC30.24■■■□□ 2.43
B020004C17RikJ3QP07 1110008F13Rik-201ENSMUST00000029165 1045 ntAPPRIS P1 TSL 1 (best) BASIC30.24■■■□□ 2.43
B020004C17RikJ3QP07 Dedd-201ENSMUST00000064950 1618 ntAPPRIS P1 TSL 1 (best) BASIC30.19■■■□□ 2.42
B020004C17RikJ3QP07 Fcho2-203ENSMUST00000109403 1523 ntTSL 5 BASIC30.17■■■□□ 2.42
B020004C17RikJ3QP07 Macrod2-205ENSMUST00000110063 845 ntTSL 5 BASIC30.16■■■□□ 2.42
B020004C17RikJ3QP07 Fbxo6-201ENSMUST00000030858 1346 ntAPPRIS P1 TSL 1 (best) BASIC30.16■■■□□ 2.42
B020004C17RikJ3QP07 Cadm4-201ENSMUST00000068023 2161 ntAPPRIS P1 TSL 1 (best) BASIC30.13■■■□□ 2.41
B020004C17RikJ3QP07 Capns1-201ENSMUST00000001845 1600 ntAPPRIS P2 TSL 5 BASIC30.13■■■□□ 2.41
B020004C17RikJ3QP07 Dut-202ENSMUST00000082122 1020 ntTSL 1 (best) BASIC30.12■■■□□ 2.41
B020004C17RikJ3QP07 Emx1-201ENSMUST00000045942 1561 ntAPPRIS P1 TSL 1 (best) BASIC30.11■■■□□ 2.41
B020004C17RikJ3QP07 Mthfd2l-203ENSMUST00000202781 688 ntTSL 1 (best) BASIC30.11■■■□□ 2.41
B020004C17RikJ3QP07 Cds2-203ENSMUST00000110158 1247 ntTSL 1 (best) BASIC30.09■■■□□ 2.41
B020004C17RikJ3QP07 Gm20503-201ENSMUST00000174664 1294 ntAPPRIS P1 TSL 5 BASIC30.09■■■□□ 2.41
B020004C17RikJ3QP07 Crip2-201ENSMUST00000084882 1439 ntAPPRIS P1 TSL 1 (best) BASIC30.07■■■□□ 2.4
B020004C17RikJ3QP07 BC037032-205ENSMUST00000187080 508 ntTSL 5 BASIC30.07■■■□□ 2.4
B020004C17RikJ3QP07 Qrich1-209ENSMUST00000194385 975 ntTSL 2 BASIC30.07■■■□□ 2.4
B020004C17RikJ3QP07 Ppp1r14b-201ENSMUST00000070850 919 ntAPPRIS P1 TSL 1 (best) BASIC30.06■■■□□ 2.4
B020004C17RikJ3QP07 Dhrs13-203ENSMUST00000122342 1791 ntTSL 1 (best) BASIC30.05■■■□□ 2.4
B020004C17RikJ3QP07 Gng13-201ENSMUST00000115108 347 ntAPPRIS P1 TSL 1 (best) BASIC30.04■■■□□ 2.4
B020004C17RikJ3QP07 2810459M11Rik-201ENSMUST00000027429 1225 ntAPPRIS ALT2 TSL 1 (best) BASIC30.04■■■□□ 2.4
B020004C17RikJ3QP07 March2-205ENSMUST00000173015 1418 ntTSL 3 BASIC30.03■■■□□ 2.4
B020004C17RikJ3QP07 E330040D14Rik-201ENSMUST00000192299 1374 ntBASIC30.03■■■□□ 2.4
B020004C17RikJ3QP07 C2cd4d-201ENSMUST00000169433 1321 ntAPPRIS P1 TSL 3 BASIC30.02■■■□□ 2.4
B020004C17RikJ3QP07 1810026B05Rik-202ENSMUST00000184554 782 ntTSL 3 BASIC30.02■■■□□ 2.4
B020004C17RikJ3QP07 Pradc1-202ENSMUST00000113770 610 ntTSL 1 (best) BASIC30■■■□□ 2.39
B020004C17RikJ3QP07 Orai1-201ENSMUST00000051016 1482 ntAPPRIS P1 TSL 1 (best) BASIC29.99■■■□□ 2.39
B020004C17RikJ3QP07 C1qtnf5-201ENSMUST00000114815 1215 ntAPPRIS P1 TSL 1 (best) BASIC29.99■■■□□ 2.39
B020004C17RikJ3QP07 Mxra7-202ENSMUST00000047715 757 ntAPPRIS ALT2 TSL 1 (best) BASIC29.99■■■□□ 2.39
B020004C17RikJ3QP07 Spg7-201ENSMUST00000108868 845 ntTSL 2 BASIC29.97■■■□□ 2.39
B020004C17RikJ3QP07 Lactb-202ENSMUST00000215172 1806 ntTSL 1 (best) BASIC29.96■■■□□ 2.39
B020004C17RikJ3QP07 Tnfsf12-202ENSMUST00000181810 1435 ntAPPRIS P1 TSL 1 (best) BASIC29.96■■■□□ 2.39
B020004C17RikJ3QP07 Vsig8-202ENSMUST00000177086 1519 ntTSL 1 (best) BASIC29.94■■■□□ 2.38
B020004C17RikJ3QP07 Ube2f-202ENSMUST00000171112 1547 ntAPPRIS P1 TSL 1 (best) BASIC29.92■■■□□ 2.38
B020004C17RikJ3QP07 Sept3-202ENSMUST00000116423 2467 ntAPPRIS P1 TSL 1 (best) BASIC29.91■■■□□ 2.38
B020004C17RikJ3QP07 Foxd3-201ENSMUST00000087285 2324 ntAPPRIS P1 BASIC29.91■■■□□ 2.38
B020004C17RikJ3QP07 Ubl4a-207ENSMUST00000178691 1038 ntAPPRIS P1 TSL 2 BASIC29.91■■■□□ 2.38
B020004C17RikJ3QP07 Egln2-201ENSMUST00000080058 2107 ntAPPRIS P1 TSL 1 (best) BASIC29.9■■■□□ 2.38
B020004C17RikJ3QP07 Tsen34-203ENSMUST00000108629 1238 ntTSL 1 (best) BASIC29.89■■■□□ 2.38
B020004C17RikJ3QP07 Gm24970-201ENSMUST00000175582 82 ntBASIC29.88■■■□□ 2.37
B020004C17RikJ3QP07 1810026B05Rik-206ENSMUST00000187421 519 ntTSL 3 BASIC29.88■■■□□ 2.37
B020004C17RikJ3QP07 A330023F24Rik-201ENSMUST00000181226 955 ntTSL 1 (best) BASIC29.87■■■□□ 2.37
B020004C17RikJ3QP07 Ranbp1-202ENSMUST00000115645 1085 ntAPPRIS P1 TSL 1 (best) BASIC29.86■■■□□ 2.37
B020004C17RikJ3QP07 Tmem243-201ENSMUST00000115365 1040 ntAPPRIS P1 TSL 2 BASIC29.83■■■□□ 2.37
B020004C17RikJ3QP07 Cib1-201ENSMUST00000065163 1047 ntAPPRIS P1 TSL 1 (best) BASIC29.83■■■□□ 2.37
B020004C17RikJ3QP07 Calm3-201ENSMUST00000019514 2290 ntAPPRIS P1 TSL 1 (best) BASIC29.83■■■□□ 2.37
B020004C17RikJ3QP07 Gnai2-201ENSMUST00000055704 2215 ntAPPRIS P1 TSL 1 (best) BASIC29.83■■■□□ 2.37
B020004C17RikJ3QP07 Stard3nl-210ENSMUST00000222869 1030 ntTSL 5 BASIC29.81■■■□□ 2.36
B020004C17RikJ3QP07 Cetn4-202ENSMUST00000075537 762 ntTSL 3 BASIC29.81■■■□□ 2.36
B020004C17RikJ3QP07 Tprgl-201ENSMUST00000030896 1724 ntAPPRIS P1 TSL 1 (best) BASIC29.8■■■□□ 2.36
B020004C17RikJ3QP07 Evx2-202ENSMUST00000173623 1428 ntAPPRIS P2 TSL 1 (best) BASIC29.76■■■□□ 2.35
B020004C17RikJ3QP07 Hrh3-208ENSMUST00000171736 906 ntTSL 5 BASIC29.75■■■□□ 2.35
B020004C17RikJ3QP07 Gm12523-201ENSMUST00000148844 599 ntTSL 5 BASIC29.74■■■□□ 2.35
B020004C17RikJ3QP07 Sowahd-201ENSMUST00000060057 1574 ntAPPRIS P1 BASIC29.73■■■□□ 2.35
B020004C17RikJ3QP07 Rnd2-201ENSMUST00000001347 1394 ntAPPRIS P1 TSL 1 (best) BASIC29.71■■■□□ 2.35
B020004C17RikJ3QP07 Gkap1-201ENSMUST00000091579 1523 ntAPPRIS P1 TSL 1 (best) BASIC29.71■■■□□ 2.35
B020004C17RikJ3QP07 Bok-201ENSMUST00000027499 1468 ntAPPRIS P1 TSL 1 (best) BASIC29.7■■■□□ 2.35
B020004C17RikJ3QP07 Gm26699-201ENSMUST00000180825 2291 ntTSL 5 BASIC29.7■■■□□ 2.34
B020004C17RikJ3QP07 AY074887-201ENSMUST00000054018 769 ntAPPRIS P1 BASIC29.69■■■□□ 2.34
B020004C17RikJ3QP07 Epcam-201ENSMUST00000053577 2040 ntAPPRIS P1 TSL 5 BASIC29.69■■■□□ 2.34
B020004C17RikJ3QP07 Rpia-201ENSMUST00000066134 1829 ntAPPRIS P1 TSL 1 (best) BASIC29.68■■■□□ 2.34
B020004C17RikJ3QP07 Tnfsfm13-202ENSMUST00000174159 1470 ntAPPRIS ALT2 TSL 2 BASIC29.68■■■□□ 2.34
B020004C17RikJ3QP07 Ssbp3-203ENSMUST00000097934 1742 ntAPPRIS ALT2 TSL 5 BASIC29.65■■■□□ 2.34
B020004C17RikJ3QP07 Junos-204ENSMUST00000128094 830 ntTSL 1 (best) BASIC29.64■■■□□ 2.34
B020004C17RikJ3QP07 Ube2e2-205ENSMUST00000150727 1523 ntAPPRIS P1 TSL 1 (best) BASIC29.64■■■□□ 2.34
B020004C17RikJ3QP07 Bok-205ENSMUST00000201863 883 ntAPPRIS P1 TSL 5 BASIC29.62■■■□□ 2.33
B020004C17RikJ3QP07 Macrod1-201ENSMUST00000040261 1274 ntAPPRIS P1 TSL 1 (best) BASIC29.62■■■□□ 2.33
B020004C17RikJ3QP07 Gm527-201ENSMUST00000058135 1468 ntAPPRIS P1 TSL 1 (best) BASIC29.61■■■□□ 2.33
B020004C17RikJ3QP07 6530409C15Rik-202ENSMUST00000143551 1573 ntTSL 1 (best) BASIC29.61■■■□□ 2.33
Retrieved 100 of 76,532 protein–RNA pairs in 12.1 ms