Protein–RNA interactions for Protein: E9Q235

Vmn1r88, Vomeronasal type-1 receptor, mousemouse

Predictions only

Length 316 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Vmn1r88E9Q235 Ccdc122-202ENSMUST00000095625 1195 ntAPPRIS ALT2 TSL 1 (best) BASIC26.89■■□□□ 1.9
Vmn1r88E9Q235 1700016A09Rik-201ENSMUST00000192004 835 ntBASIC26.87■■□□□ 1.89
Vmn1r88E9Q235 Shf-201ENSMUST00000048635 1431 ntAPPRIS P2 TSL 1 (best) BASIC26.86■■□□□ 1.89
Vmn1r88E9Q235 Gm10762-201ENSMUST00000099385 1133 ntAPPRIS P1 BASIC26.85■■□□□ 1.89
Vmn1r88E9Q235 Lsm4-204ENSMUST00000210071 575 ntTSL 5 BASIC26.82■■□□□ 1.88
Vmn1r88E9Q235 Ube2q2-202ENSMUST00000121677 1680 ntAPPRIS ALT2 TSL 5 BASIC26.8■■□□□ 1.88
Vmn1r88E9Q235 Ccm2l-201ENSMUST00000109800 2158 ntAPPRIS P1 TSL 5 BASIC26.8■■□□□ 1.88
Vmn1r88E9Q235 Syt7-201ENSMUST00000073899 1605 ntAPPRIS P1 TSL 1 (best) BASIC26.79■■□□□ 1.88
Vmn1r88E9Q235 Gm5601-202ENSMUST00000207161 1437 ntTSL 1 (best) BASIC26.78■■□□□ 1.88
Vmn1r88E9Q235 Gm42517-201ENSMUST00000197216 1850 ntAPPRIS P1 BASIC26.78■■□□□ 1.88
Vmn1r88E9Q235 Rnf215-201ENSMUST00000003677 1874 ntAPPRIS P1 TSL 1 (best) BASIC26.78■■□□□ 1.88
Vmn1r88E9Q235 Tmeff1-202ENSMUST00000123476 1224 ntAPPRIS P1 TSL 1 (best) BASIC26.77■■□□□ 1.88
Vmn1r88E9Q235 Gm527-203ENSMUST00000220993 1090 ntTSL 5 BASIC26.75■■□□□ 1.87
Vmn1r88E9Q235 Atp1b3-201ENSMUST00000034983 1994 ntAPPRIS P1 TSL 1 (best) BASIC26.75■■□□□ 1.87
Vmn1r88E9Q235 1190005I06Rik-201ENSMUST00000123927 844 ntAPPRIS P2 TSL 1 (best) BASIC26.74■■□□□ 1.87
Vmn1r88E9Q235 Kcnmb4os2-201ENSMUST00000080943 1571 ntTSL 5 BASIC26.73■■□□□ 1.87
Vmn1r88E9Q235 A530058N18Rik-201ENSMUST00000128469 646 ntTSL 2 BASIC26.72■■□□□ 1.87
Vmn1r88E9Q235 Dapk3-209ENSMUST00000219850 1482 ntAPPRIS P1 TSL 1 (best) BASIC26.71■■□□□ 1.87
Vmn1r88E9Q235 Nrtn-201ENSMUST00000044752 1023 ntAPPRIS P1 TSL 1 (best) BASIC26.69■■□□□ 1.86
Vmn1r88E9Q235 Crlf1-201ENSMUST00000008032 1644 ntAPPRIS P1 TSL 1 (best) BASIC26.68■■□□□ 1.86
Vmn1r88E9Q235 AC150314.2-201ENSMUST00000214135 834 ntTSL 5 BASIC26.67■■□□□ 1.86
Vmn1r88E9Q235 Gm45855-201ENSMUST00000212546 880 ntBASIC26.65■■□□□ 1.86
Vmn1r88E9Q235 A530058N18Rik-207ENSMUST00000152254 1211 ntTSL 1 (best) BASIC26.63■■□□□ 1.85
Vmn1r88E9Q235 Cadm4-201ENSMUST00000068023 2161 ntAPPRIS P1 TSL 1 (best) BASIC26.6■■□□□ 1.85
Vmn1r88E9Q235 Tnfsfm13-201ENSMUST00000108649 1049 ntAPPRIS ALT2 TSL 5 BASIC26.59■■□□□ 1.85
Vmn1r88E9Q235 Hoxa13-201ENSMUST00000047993 1309 ntAPPRIS ALT2 TSL 5 BASIC26.59■■□□□ 1.85
Vmn1r88E9Q235 Emx1-201ENSMUST00000045942 1561 ntAPPRIS P1 TSL 1 (best) BASIC26.58■■□□□ 1.85
Vmn1r88E9Q235 Dtnbp1-201ENSMUST00000072329 1362 ntAPPRIS P2 TSL 1 (best) BASIC26.58■■□□□ 1.84
Vmn1r88E9Q235 Trp53rkb-202ENSMUST00000065753 1375 ntTSL 1 (best) BASIC26.57■■□□□ 1.84
Vmn1r88E9Q235 Abhd17a-201ENSMUST00000003436 1468 ntAPPRIS P1 TSL 1 (best) BASIC26.55■■□□□ 1.84
Vmn1r88E9Q235 Cdk2ap1-201ENSMUST00000031341 1315 ntAPPRIS P2 TSL 1 (best) BASIC26.55■■□□□ 1.84
Vmn1r88E9Q235 Fcho2-203ENSMUST00000109403 1523 ntTSL 5 BASIC26.55■■□□□ 1.84
Vmn1r88E9Q235 Foxd3-201ENSMUST00000087285 2324 ntAPPRIS P1 BASIC26.51■■□□□ 1.83
Vmn1r88E9Q235 Aard-201ENSMUST00000090025 1348 ntAPPRIS P1 TSL 1 (best) BASIC26.5■■□□□ 1.83
Vmn1r88E9Q235 1110008F13Rik-201ENSMUST00000029165 1045 ntAPPRIS P1 TSL 1 (best) BASIC26.5■■□□□ 1.83
Vmn1r88E9Q235 Smarcc2-205ENSMUST00000218228 603 ntTSL 5 BASIC26.48■■□□□ 1.83
Vmn1r88E9Q235 Sept3-202ENSMUST00000116423 2467 ntAPPRIS P1 TSL 1 (best) BASIC26.48■■□□□ 1.83
Vmn1r88E9Q235 Macrod2-205ENSMUST00000110063 845 ntTSL 5 BASIC26.47■■□□□ 1.83
Vmn1r88E9Q235 Gm9397-201ENSMUST00000200125 605 ntBASIC26.46■■□□□ 1.83
Vmn1r88E9Q235 4932443I19Rik-201ENSMUST00000166277 799 ntAPPRIS P2 TSL 1 (best) BASIC26.45■■□□□ 1.82
Vmn1r88E9Q235 Fbxo6-201ENSMUST00000030858 1346 ntAPPRIS P1 TSL 1 (best) BASIC26.44■■□□□ 1.82
Vmn1r88E9Q235 Dedd-201ENSMUST00000064950 1618 ntAPPRIS P1 TSL 1 (best) BASIC26.43■■□□□ 1.82
Vmn1r88E9Q235 Dhrs13-203ENSMUST00000122342 1791 ntTSL 1 (best) BASIC26.41■■□□□ 1.82
Vmn1r88E9Q235 Lactb-202ENSMUST00000215172 1806 ntTSL 1 (best) BASIC26.4■■□□□ 1.82
Vmn1r88E9Q235 Capns1-201ENSMUST00000001845 1600 ntAPPRIS P2 TSL 5 BASIC26.39■■□□□ 1.81
Vmn1r88E9Q235 Egln2-201ENSMUST00000080058 2107 ntAPPRIS P1 TSL 1 (best) BASIC26.37■■□□□ 1.81
Vmn1r88E9Q235 Mthfd2l-203ENSMUST00000202781 688 ntTSL 1 (best) BASIC26.36■■□□□ 1.81
Vmn1r88E9Q235 BC037032-205ENSMUST00000187080 508 ntTSL 5 BASIC26.35■■□□□ 1.81
Vmn1r88E9Q235 E330040D14Rik-201ENSMUST00000192299 1374 ntBASIC26.34■■□□□ 1.81
Vmn1r88E9Q235 Crip2-201ENSMUST00000084882 1439 ntAPPRIS P1 TSL 1 (best) BASIC26.33■■□□□ 1.81
Vmn1r88E9Q235 Dut-202ENSMUST00000082122 1020 ntTSL 1 (best) BASIC26.33■■□□□ 1.81
Vmn1r88E9Q235 Gm26699-201ENSMUST00000180825 2291 ntTSL 5 BASIC26.33■■□□□ 1.81
Vmn1r88E9Q235 Tnfsf12-202ENSMUST00000181810 1435 ntAPPRIS P1 TSL 1 (best) BASIC26.32■■□□□ 1.8
Vmn1r88E9Q235 Qrich1-209ENSMUST00000194385 975 ntTSL 2 BASIC26.32■■□□□ 1.8
Vmn1r88E9Q235 Calm3-201ENSMUST00000019514 2290 ntAPPRIS P1 TSL 1 (best) BASIC26.32■■□□□ 1.8
Vmn1r88E9Q235 Gnai2-201ENSMUST00000055704 2215 ntAPPRIS P1 TSL 1 (best) BASIC26.31■■□□□ 1.8
Vmn1r88E9Q235 Cds2-203ENSMUST00000110158 1247 ntTSL 1 (best) BASIC26.3■■□□□ 1.8
Vmn1r88E9Q235 March2-205ENSMUST00000173015 1418 ntTSL 3 BASIC26.3■■□□□ 1.8
Vmn1r88E9Q235 Gm20503-201ENSMUST00000174664 1294 ntAPPRIS P1 TSL 5 BASIC26.29■■□□□ 1.8
Vmn1r88E9Q235 C2cd4d-201ENSMUST00000169433 1321 ntAPPRIS P1 TSL 3 BASIC26.29■■□□□ 1.8
Vmn1r88E9Q235 C1qtnf5-201ENSMUST00000114815 1215 ntAPPRIS P1 TSL 1 (best) BASIC26.28■■□□□ 1.8
Vmn1r88E9Q235 Mxra7-202ENSMUST00000047715 757 ntAPPRIS ALT2 TSL 1 (best) BASIC26.28■■□□□ 1.8
Vmn1r88E9Q235 Vsig8-202ENSMUST00000177086 1519 ntTSL 1 (best) BASIC26.28■■□□□ 1.8
Vmn1r88E9Q235 Tprgl-201ENSMUST00000030896 1724 ntAPPRIS P1 TSL 1 (best) BASIC26.28■■□□□ 1.8
Vmn1r88E9Q235 Gng13-201ENSMUST00000115108 347 ntAPPRIS P1 TSL 1 (best) BASIC26.27■■□□□ 1.8
Vmn1r88E9Q235 Epcam-201ENSMUST00000053577 2040 ntAPPRIS P1 TSL 5 BASIC26.27■■□□□ 1.8
Vmn1r88E9Q235 Ube2f-202ENSMUST00000171112 1547 ntAPPRIS P1 TSL 1 (best) BASIC26.26■■□□□ 1.79
Vmn1r88E9Q235 Ppp1r14b-201ENSMUST00000070850 919 ntAPPRIS P1 TSL 1 (best) BASIC26.26■■□□□ 1.79
Vmn1r88E9Q235 2810459M11Rik-201ENSMUST00000027429 1225 ntAPPRIS ALT2 TSL 1 (best) BASIC26.25■■□□□ 1.79
Vmn1r88E9Q235 Ranbp1-202ENSMUST00000115645 1085 ntAPPRIS P1 TSL 1 (best) BASIC26.24■■□□□ 1.79
Vmn1r88E9Q235 1810026B05Rik-202ENSMUST00000184554 782 ntTSL 3 BASIC26.24■■□□□ 1.79
Vmn1r88E9Q235 Pradc1-202ENSMUST00000113770 610 ntTSL 1 (best) BASIC26.23■■□□□ 1.79
Vmn1r88E9Q235 Ubl4a-207ENSMUST00000178691 1038 ntAPPRIS P1 TSL 2 BASIC26.23■■□□□ 1.79
Vmn1r88E9Q235 Orai1-201ENSMUST00000051016 1482 ntAPPRIS P1 TSL 1 (best) BASIC26.23■■□□□ 1.79
Vmn1r88E9Q235 Rpia-201ENSMUST00000066134 1829 ntAPPRIS P1 TSL 1 (best) BASIC26.21■■□□□ 1.79
Vmn1r88E9Q235 Spg7-201ENSMUST00000108868 845 ntTSL 2 BASIC26.21■■□□□ 1.79
Vmn1r88E9Q235 Ldb1-208ENSMUST00000185355 2088 ntTSL 1 (best) BASIC26.19■■□□□ 1.78
Vmn1r88E9Q235 1810026B05Rik-206ENSMUST00000187421 519 ntTSL 3 BASIC26.18■■□□□ 1.78
Vmn1r88E9Q235 Tmem243-201ENSMUST00000115365 1040 ntAPPRIS P1 TSL 2 BASIC26.15■■□□□ 1.78
Vmn1r88E9Q235 Gm24970-201ENSMUST00000175582 82 ntBASIC26.15■■□□□ 1.78
Vmn1r88E9Q235 Ssbp3-203ENSMUST00000097934 1742 ntAPPRIS ALT2 TSL 5 BASIC26.12■■□□□ 1.77
Vmn1r88E9Q235 A330023F24Rik-201ENSMUST00000181226 955 ntTSL 1 (best) BASIC26.12■■□□□ 1.77
Vmn1r88E9Q235 Tsen34-203ENSMUST00000108629 1238 ntTSL 1 (best) BASIC26.11■■□□□ 1.77
Vmn1r88E9Q235 Hrh3-208ENSMUST00000171736 906 ntTSL 5 BASIC26.11■■□□□ 1.77
Vmn1r88E9Q235 Stard3nl-210ENSMUST00000222869 1030 ntTSL 5 BASIC26.11■■□□□ 1.77
Vmn1r88E9Q235 Tnfsfm13-202ENSMUST00000174159 1470 ntAPPRIS ALT2 TSL 2 BASIC26.11■■□□□ 1.77
Vmn1r88E9Q235 Gkap1-201ENSMUST00000091579 1523 ntAPPRIS P1 TSL 1 (best) BASIC26.09■■□□□ 1.77
Vmn1r88E9Q235 Bok-201ENSMUST00000027499 1468 ntAPPRIS P1 TSL 1 (best) BASIC26.09■■□□□ 1.77
Vmn1r88E9Q235 Cib1-201ENSMUST00000065163 1047 ntAPPRIS P1 TSL 1 (best) BASIC26.08■■□□□ 1.77
Vmn1r88E9Q235 Rnd2-201ENSMUST00000001347 1394 ntAPPRIS P1 TSL 1 (best) BASIC26.07■■□□□ 1.76
Vmn1r88E9Q235 Sowahd-201ENSMUST00000060057 1574 ntAPPRIS P1 BASIC26.07■■□□□ 1.76
Vmn1r88E9Q235 Gm12523-201ENSMUST00000148844 599 ntTSL 5 BASIC26.04■■□□□ 1.76
Vmn1r88E9Q235 Cetn4-202ENSMUST00000075537 762 ntTSL 3 BASIC26.04■■□□□ 1.76
Vmn1r88E9Q235 Azin2-201ENSMUST00000030581 2063 ntAPPRIS P1 TSL 1 (best) BASIC26.03■■□□□ 1.76
Vmn1r88E9Q235 Mocs3-201ENSMUST00000099071 1973 ntAPPRIS P1 BASIC26.01■■□□□ 1.75
Vmn1r88E9Q235 Junos-204ENSMUST00000128094 830 ntTSL 1 (best) BASIC26■■□□□ 1.75
Vmn1r88E9Q235 Gm527-201ENSMUST00000058135 1468 ntAPPRIS P1 TSL 1 (best) BASIC25.99■■□□□ 1.75
Vmn1r88E9Q235 Evx2-202ENSMUST00000173623 1428 ntAPPRIS P2 TSL 1 (best) BASIC25.99■■□□□ 1.75
Vmn1r88E9Q235 Bok-205ENSMUST00000201863 883 ntAPPRIS P1 TSL 5 BASIC25.99■■□□□ 1.75
Vmn1r88E9Q235 6530409C15Rik-202ENSMUST00000143551 1573 ntTSL 1 (best) BASIC25.99■■□□□ 1.75
Retrieved 100 of 76,532 protein–RNA pairs in 26.5 ms