Protein–RNA interactions for Protein: D3YXG0

Hmcn1, Hemicentin-1, mousemouse

Predictions only

Length 5,634 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Hmcn1D3YXG0 Atoh7-201ENSMUST00000044059 1629 ntAPPRIS P1 BASIC8.23□□□□□ -1.09
Hmcn1D3YXG0 Dedd-201ENSMUST00000064950 1618 ntAPPRIS P1 TSL 1 (best) BASIC8.23□□□□□ -1.09
Hmcn1D3YXG0 Rrnad1-207ENSMUST00000160143 1568 ntTSL 5 BASIC8.22□□□□□ -1.09
Hmcn1D3YXG0 Crip2-201ENSMUST00000084882 1439 ntAPPRIS P1 TSL 1 (best) BASIC8.22□□□□□ -1.09
Hmcn1D3YXG0 Mthfd2l-203ENSMUST00000202781 688 ntTSL 1 (best) BASIC8.21□□□□□ -1.1
Hmcn1D3YXG0 Orai1-201ENSMUST00000051016 1482 ntAPPRIS P1 TSL 1 (best) BASIC8.21□□□□□ -1.1
Hmcn1D3YXG0 Hspb1-202ENSMUST00000111155 930 ntTSL 1 (best) BASIC8.21□□□□□ -1.1
Hmcn1D3YXG0 Gm6821-201ENSMUST00000107540 542 ntBASIC8.19□□□□□ -1.1
Hmcn1D3YXG0 Stradb-202ENSMUST00000114296 1348 ntTSL 1 (best) BASIC8.19□□□□□ -1.1
Hmcn1D3YXG0 Znrf3-202ENSMUST00000143746 1022 ntTSL 1 (best) BASIC8.19□□□□□ -1.1
Hmcn1D3YXG0 Peli2-204ENSMUST00000226513 1320 ntBASIC8.18□□□□□ -1.1
Hmcn1D3YXG0 Mbd3-204ENSMUST00000105349 1566 ntTSL 1 (best) BASIC8.18□□□□□ -1.1
Hmcn1D3YXG0 BC037032-205ENSMUST00000187080 508 ntTSL 5 BASIC8.17□□□□□ -1.1
Hmcn1D3YXG0 Gm9939-201ENSMUST00000067161 1154 ntBASIC8.17□□□□□ -1.1
Hmcn1D3YXG0 1810026B05Rik-202ENSMUST00000184554 782 ntTSL 3 BASIC8.16□□□□□ -1.1
Hmcn1D3YXG0 Eif5a-201ENSMUST00000043419 1437 ntAPPRIS P1 TSL 1 (best) BASIC8.15□□□□□ -1.1
Hmcn1D3YXG0 Gm28592-201ENSMUST00000186844 741 ntTSL 5 BASIC8.15□□□□□ -1.1
Hmcn1D3YXG0 1810026B05Rik-206ENSMUST00000187421 519 ntTSL 3 BASIC8.15□□□□□ -1.11
Hmcn1D3YXG0 Trabd-203ENSMUST00000165690 1941 ntAPPRIS P2 TSL 1 (best) BASIC8.13□□□□□ -1.11
Hmcn1D3YXG0 Btf3-201ENSMUST00000022163 1091 ntTSL 1 (best) BASIC8.13□□□□□ -1.11
Hmcn1D3YXG0 Capns1-201ENSMUST00000001845 1600 ntAPPRIS P2 TSL 5 BASIC8.13□□□□□ -1.11
Hmcn1D3YXG0 Guk1-204ENSMUST00000170202 1078 ntAPPRIS P1 TSL 1 (best) BASIC8.13□□□□□ -1.11
Hmcn1D3YXG0 Mir6538-201ENSMUST00000183713 110 ntBASIC8.13□□□□□ -1.11
Hmcn1D3YXG0 Rab43-202ENSMUST00000032135 1262 ntTSL 1 (best) BASIC8.12□□□□□ -1.11
Hmcn1D3YXG0 Stard10-201ENSMUST00000032927 1400 ntAPPRIS P1 TSL 1 (best) BASIC8.12□□□□□ -1.11
Hmcn1D3YXG0 Fbxo6-201ENSMUST00000030858 1346 ntAPPRIS P1 TSL 1 (best) BASIC8.12□□□□□ -1.11
Hmcn1D3YXG0 AL845457.1-201ENSMUST00000197244 68 ntBASIC8.11□□□□□ -1.11
Hmcn1D3YXG0 Scx-201ENSMUST00000043089 1136 ntAPPRIS P1 TSL 1 (best) BASIC8.11□□□□□ -1.11
Hmcn1D3YXG0 Mta3-202ENSMUST00000112349 1728 ntAPPRIS ALT2 TSL 1 (best) BASIC8.11□□□□□ -1.11
Hmcn1D3YXG0 Fkbp8-204ENSMUST00000119698 1799 ntAPPRIS P4 TSL 1 (best) BASIC8.11□□□□□ -1.11
Hmcn1D3YXG0 March2-205ENSMUST00000173015 1418 ntTSL 3 BASIC8.11□□□□□ -1.11
Hmcn1D3YXG0 Rab22a-202ENSMUST00000109110 849 ntTSL 5 BASIC8.11□□□□□ -1.11
Hmcn1D3YXG0 Gm24970-201ENSMUST00000175582 82 ntBASIC8.1□□□□□ -1.11
Hmcn1D3YXG0 Macrod1-201ENSMUST00000040261 1274 ntAPPRIS P1 TSL 1 (best) BASIC8.1□□□□□ -1.11
Hmcn1D3YXG0 Snrpe-202ENSMUST00000164574 597 ntTSL 3 BASIC8.09□□□□□ -1.11
Hmcn1D3YXG0 Gm5601-202ENSMUST00000207161 1437 ntTSL 1 (best) BASIC8.09□□□□□ -1.11
Hmcn1D3YXG0 Dlx6os2-201ENSMUST00000178206 1354 ntBASIC8.09□□□□□ -1.11
Hmcn1D3YXG0 A530058N18Rik-207ENSMUST00000152254 1211 ntTSL 1 (best) BASIC8.09□□□□□ -1.11
Hmcn1D3YXG0 Fbll1-201ENSMUST00000160726 1503 ntAPPRIS P1 BASIC8.07□□□□□ -1.12
Hmcn1D3YXG0 Rab4b-201ENSMUST00000093040 1192 ntAPPRIS P1 TSL 1 (best) BASIC8.06□□□□□ -1.12
Hmcn1D3YXG0 Popdc3-202ENSMUST00000161803 1369 ntTSL 1 (best) BASIC8.06□□□□□ -1.12
Hmcn1D3YXG0 Igfbp7-201ENSMUST00000046746 1116 ntAPPRIS ALT2 TSL 1 (best) BASIC8.06□□□□□ -1.12
Hmcn1D3YXG0 Dtnbp1-202ENSMUST00000110128 1305 ntAPPRIS ALT2 TSL 5 BASIC8.05□□□□□ -1.12
Hmcn1D3YXG0 Gas1-202ENSMUST00000223933 1155 ntAPPRIS P2 BASIC8.05□□□□□ -1.12
Hmcn1D3YXG0 Mtm1-204ENSMUST00000101501 770 ntTSL 1 (best) BASIC8.05□□□□□ -1.12
Hmcn1D3YXG0 Mkrn1-202ENSMUST00000051671 1511 ntTSL 1 (best) BASIC8.04□□□□□ -1.12
Hmcn1D3YXG0 Carnmt1-201ENSMUST00000025632 2090 ntAPPRIS P1 TSL 1 (best) BASIC8.04□□□□□ -1.12
Hmcn1D3YXG0 Pard6a-203ENSMUST00000211888 1179 ntTSL 1 (best) BASIC8.04□□□□□ -1.12
Hmcn1D3YXG0 Fam89a-201ENSMUST00000055257 1338 ntAPPRIS P1 TSL 1 (best) BASIC8.03□□□□□ -1.12
Hmcn1D3YXG0 Asf1a-205ENSMUST00000219282 1150 ntTSL 5 BASIC8.03□□□□□ -1.12
Hmcn1D3YXG0 Slc30a2-203ENSMUST00000105873 1224 ntTSL 5 BASIC8.03□□□□□ -1.12
Hmcn1D3YXG0 1700084E18Rik-202ENSMUST00000205624 729 ntBASIC8.01□□□□□ -1.13
Hmcn1D3YXG0 Gm11175-201ENSMUST00000116172 543 ntBASIC8.01□□□□□ -1.13
Hmcn1D3YXG0 G6pc3-202ENSMUST00000078975 1573 ntAPPRIS P1 TSL 1 (best) BASIC8.01□□□□□ -1.13
Hmcn1D3YXG0 Kcnip2-208ENSMUST00000161886 693 ntAPPRIS P3 TSL 1 (best) BASIC8□□□□□ -1.13
Hmcn1D3YXG0 Gm10524-201ENSMUST00000181931 1893 ntBASIC8□□□□□ -1.13
Hmcn1D3YXG0 Tcte3-201ENSMUST00000040746 788 ntAPPRIS P1 TSL 1 (best) BASIC8□□□□□ -1.13
Hmcn1D3YXG0 Tcte3-202ENSMUST00000097398 632 ntTSL 1 (best) BASIC8□□□□□ -1.13
Hmcn1D3YXG0 Tceal5-201ENSMUST00000066819 1044 ntAPPRIS P1 TSL 1 (best) BASIC7.99□□□□□ -1.13
Hmcn1D3YXG0 Gskip-202ENSMUST00000222284 1064 ntTSL 1 (best) BASIC7.99□□□□□ -1.13
Hmcn1D3YXG0 Psd-208ENSMUST00000224556 2034 ntBASIC7.98□□□□□ -1.13
Hmcn1D3YXG0 Chmp4b-201ENSMUST00000044277 1616 ntAPPRIS P1 TSL 1 (best) BASIC7.98□□□□□ -1.13
Hmcn1D3YXG0 Gm42517-201ENSMUST00000197216 1850 ntAPPRIS P1 BASIC7.98□□□□□ -1.13
Hmcn1D3YXG0 Stard3nl-210ENSMUST00000222869 1030 ntTSL 5 BASIC7.98□□□□□ -1.13
Hmcn1D3YXG0 Kcnmb4os2-201ENSMUST00000080943 1571 ntTSL 5 BASIC7.97□□□□□ -1.13
Hmcn1D3YXG0 Tmem243-201ENSMUST00000115365 1040 ntAPPRIS P1 TSL 2 BASIC7.97□□□□□ -1.13
Hmcn1D3YXG0 Gm7432-201ENSMUST00000210343 879 ntBASIC7.96□□□□□ -1.13
Hmcn1D3YXG0 Hoxa4-201ENSMUST00000101395 1594 ntAPPRIS P1 TSL 1 (best) BASIC7.96□□□□□ -1.14
Hmcn1D3YXG0 Cap2-205ENSMUST00000225824 1634 ntBASIC7.96□□□□□ -1.14
Hmcn1D3YXG0 Macrod2-205ENSMUST00000110063 845 ntTSL 5 BASIC7.95□□□□□ -1.14
Hmcn1D3YXG0 Nt5dc2-204ENSMUST00000227096 1848 ntAPPRIS P5 BASIC7.94□□□□□ -1.14
Hmcn1D3YXG0 Lmo2-201ENSMUST00000111139 1434 ntTSL 5 BASIC7.94□□□□□ -1.14
Hmcn1D3YXG0 Tmbim4-204ENSMUST00000134797 486 ntTSL 1 (best) BASIC7.94□□□□□ -1.14
Hmcn1D3YXG0 Trp53rkb-202ENSMUST00000065753 1375 ntTSL 1 (best) BASIC7.94□□□□□ -1.14
Hmcn1D3YXG0 CT025624.2-201ENSMUST00000223609 1909 ntBASIC7.94□□□□□ -1.14
Hmcn1D3YXG0 Gm42596-201ENSMUST00000196305 1958 ntBASIC7.94□□□□□ -1.14
Hmcn1D3YXG0 Kras-207ENSMUST00000203147 817 ntTSL 5 BASIC7.94□□□□□ -1.14
Hmcn1D3YXG0 Mrpl23-201ENSMUST00000038675 692 ntAPPRIS P2 TSL 1 (best) BASIC7.93□□□□□ -1.14
Hmcn1D3YXG0 Kmt5a-202ENSMUST00000100709 1425 ntTSL 1 (best) BASIC7.93□□□□□ -1.14
Hmcn1D3YXG0 1110008P14Rik-201ENSMUST00000048792 680 ntAPPRIS P1 TSL 1 (best) BASIC7.93□□□□□ -1.14
Hmcn1D3YXG0 Tbcel-204ENSMUST00000128959 1535 ntAPPRIS P1 TSL 5 BASIC7.93□□□□□ -1.14
Hmcn1D3YXG0 1700003F12Rik-202ENSMUST00000109709 704 ntAPPRIS ALT2 TSL 3 BASIC7.92□□□□□ -1.14
Hmcn1D3YXG0 1700003F12Rik-201ENSMUST00000045116 704 ntAPPRIS P2 TSL 1 (best) BASIC7.92□□□□□ -1.14
Hmcn1D3YXG0 Hnrnpd-202ENSMUST00000072750 1537 ntAPPRIS ALT2 TSL 3 BASIC7.92□□□□□ -1.14
Hmcn1D3YXG0 Syt7-201ENSMUST00000073899 1605 ntAPPRIS P1 TSL 1 (best) BASIC7.91□□□□□ -1.14
Hmcn1D3YXG0 Nfic-204ENSMUST00000117966 1655 ntTSL 1 (best) BASIC7.91□□□□□ -1.14
Hmcn1D3YXG0 Tnfsf12-202ENSMUST00000181810 1435 ntAPPRIS P1 TSL 1 (best) BASIC7.91□□□□□ -1.14
Hmcn1D3YXG0 Uba52-205ENSMUST00000129909 705 ntAPPRIS P1 TSL 2 BASIC7.91□□□□□ -1.14
Hmcn1D3YXG0 Cadm1-210ENSMUST00000214542 899 ntTSL 1 (best) BASIC7.9□□□□□ -1.14
Hmcn1D3YXG0 Vegfb-202ENSMUST00000130048 1158 ntAPPRIS ALT2 TSL 1 (best) BASIC7.9□□□□□ -1.15
Hmcn1D3YXG0 Gm31266-201ENSMUST00000192060 656 ntTSL 5 BASIC7.9□□□□□ -1.15
Hmcn1D3YXG0 Crlf1-201ENSMUST00000008032 1644 ntAPPRIS P1 TSL 1 (best) BASIC7.9□□□□□ -1.15
Hmcn1D3YXG0 Pcbd2-201ENSMUST00000021958 544 ntTSL 1 (best) BASIC7.89□□□□□ -1.15
Hmcn1D3YXG0 Sh3glb2-201ENSMUST00000028214 1810 ntAPPRIS P1 TSL 1 (best) BASIC7.88□□□□□ -1.15
Hmcn1D3YXG0 Gm11529-201ENSMUST00000153012 639 ntTSL 1 (best) BASIC7.87□□□□□ -1.15
Hmcn1D3YXG0 Rpl31-203ENSMUST00000179954 630 ntAPPRIS P1 TSL 1 (best) BASIC7.87□□□□□ -1.15
Hmcn1D3YXG0 Cenpv-201ENSMUST00000018653 1032 ntAPPRIS P1 TSL 1 (best) BASIC7.87□□□□□ -1.15
Hmcn1D3YXG0 Gm11599-201ENSMUST00000118720 878 ntBASIC7.87□□□□□ -1.15
Hmcn1D3YXG0 Dbp-204ENSMUST00000211513 1156 ntTSL 5 BASIC7.86□□□□□ -1.15
Hmcn1D3YXG0 Fam149b-201ENSMUST00000037698 924 ntTSL 1 (best) BASIC7.86□□□□□ -1.15
Retrieved 100 of 76,532 protein–RNA pairs in 50.3 ms