Protein–RNA interactions for Protein: B9EKX1

Ptchd4, Patched domain-containing protein 4, mousemouse

Predictions only

Length 904 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ptchd4B9EKX1 Ldb1-208ENSMUST00000185355 2088 ntTSL 1 (best) BASIC28.95■■■□□ 2.22
Ptchd4B9EKX1 Sh3glb2-203ENSMUST00000113620 1694 ntTSL 1 (best) BASIC28.92■■■□□ 2.22
Ptchd4B9EKX1 Gm42517-201ENSMUST00000197216 1850 ntAPPRIS P1 BASIC28.91■■■□□ 2.22
Ptchd4B9EKX1 Cgref1-201ENSMUST00000031051 1442 ntAPPRIS P1 TSL 1 (best) BASIC28.91■■■□□ 2.22
Ptchd4B9EKX1 Slc25a28-201ENSMUST00000046038 1514 ntAPPRIS P1 TSL 1 (best) BASIC28.85■■■□□ 2.21
Ptchd4B9EKX1 Ube2ql1-201ENSMUST00000065118 2674 ntAPPRIS P1 TSL 1 (best) BASIC28.85■■■□□ 2.21
Ptchd4B9EKX1 Egln2-201ENSMUST00000080058 2107 ntAPPRIS P1 TSL 1 (best) BASIC28.84■■■□□ 2.21
Ptchd4B9EKX1 Calm3-201ENSMUST00000019514 2290 ntAPPRIS P1 TSL 1 (best) BASIC28.81■■■□□ 2.2
Ptchd4B9EKX1 Syt7-201ENSMUST00000073899 1605 ntAPPRIS P1 TSL 1 (best) BASIC28.81■■■□□ 2.2
Ptchd4B9EKX1 Fam60a-203ENSMUST00000111562 906 ntAPPRIS P1 TSL 3 BASIC28.81■■■□□ 2.2
Ptchd4B9EKX1 Lactb-202ENSMUST00000215172 1806 ntTSL 1 (best) BASIC28.8■■■□□ 2.2
Ptchd4B9EKX1 Crlf1-201ENSMUST00000008032 1644 ntAPPRIS P1 TSL 1 (best) BASIC28.8■■■□□ 2.2
Ptchd4B9EKX1 Dapk3-209ENSMUST00000219850 1482 ntAPPRIS P1 TSL 1 (best) BASIC28.79■■■□□ 2.2
Ptchd4B9EKX1 Gnai2-201ENSMUST00000055704 2215 ntAPPRIS P1 TSL 1 (best) BASIC28.77■■■□□ 2.2
Ptchd4B9EKX1 Gm5601-202ENSMUST00000207161 1437 ntTSL 1 (best) BASIC28.77■■■□□ 2.2
Ptchd4B9EKX1 Kcnmb4os2-201ENSMUST00000080943 1571 ntTSL 5 BASIC28.76■■■□□ 2.19
Ptchd4B9EKX1 Gm266-201ENSMUST00000010673 1215 ntAPPRIS P1 BASIC28.75■■■□□ 2.19
Ptchd4B9EKX1 Fcho2-203ENSMUST00000109403 1523 ntTSL 5 BASIC28.74■■■□□ 2.19
Ptchd4B9EKX1 Rpia-201ENSMUST00000066134 1829 ntAPPRIS P1 TSL 1 (best) BASIC28.73■■■□□ 2.19
Ptchd4B9EKX1 Eif2ak3-204ENSMUST00000162950 927 ntTSL 1 (best) BASIC28.73■■■□□ 2.19
Ptchd4B9EKX1 Abhd17a-201ENSMUST00000003436 1468 ntAPPRIS P1 TSL 1 (best) BASIC28.69■■■□□ 2.18
Ptchd4B9EKX1 Ccdc122-202ENSMUST00000095625 1195 ntAPPRIS ALT2 TSL 1 (best) BASIC28.68■■■□□ 2.18
Ptchd4B9EKX1 Gm10762-201ENSMUST00000099385 1133 ntAPPRIS P1 BASIC28.68■■■□□ 2.18
Ptchd4B9EKX1 CT030161.2-201ENSMUST00000218666 735 ntTSL 3 BASIC28.66■■■□□ 2.18
Ptchd4B9EKX1 Tprgl-201ENSMUST00000030896 1724 ntAPPRIS P1 TSL 1 (best) BASIC28.65■■■□□ 2.18
Ptchd4B9EKX1 A530058N18Rik-201ENSMUST00000128469 646 ntTSL 2 BASIC28.64■■■□□ 2.18
Ptchd4B9EKX1 Tdp2-203ENSMUST00000223804 1136 ntBASIC28.64■■■□□ 2.18
Ptchd4B9EKX1 Ldb1-207ENSMUST00000156585 2014 ntTSL 1 (best) BASIC28.62■■■□□ 2.17
Ptchd4B9EKX1 Gtf2a2-203ENSMUST00000119413 1034 ntAPPRIS P1 TSL 1 (best) BASIC28.61■■■□□ 2.17
Ptchd4B9EKX1 Tmeff1-202ENSMUST00000123476 1224 ntAPPRIS P1 TSL 1 (best) BASIC28.6■■■□□ 2.17
Ptchd4B9EKX1 Rpl19-ps4-201ENSMUST00000167150 625 ntBASIC28.6■■■□□ 2.17
Ptchd4B9EKX1 1700016A09Rik-201ENSMUST00000192004 835 ntBASIC28.57■■■□□ 2.16
Ptchd4B9EKX1 Wsb2-201ENSMUST00000031309 2421 ntAPPRIS P2 TSL 1 (best) BASIC28.57■■■□□ 2.16
Ptchd4B9EKX1 Fam241a-202ENSMUST00000199273 2234 ntAPPRIS P1 TSL 1 (best) BASIC28.55■■■□□ 2.16
Ptchd4B9EKX1 Dhrs13-203ENSMUST00000122342 1791 ntTSL 1 (best) BASIC28.53■■■□□ 2.16
Ptchd4B9EKX1 Trp53rkb-202ENSMUST00000065753 1375 ntTSL 1 (best) BASIC28.52■■■□□ 2.16
Ptchd4B9EKX1 Azin2-201ENSMUST00000030581 2063 ntAPPRIS P1 TSL 1 (best) BASIC28.5■■■□□ 2.15
Ptchd4B9EKX1 Tnfsf12-202ENSMUST00000181810 1435 ntAPPRIS P1 TSL 1 (best) BASIC28.46■■■□□ 2.15
Ptchd4B9EKX1 Hoxa13-201ENSMUST00000047993 1309 ntAPPRIS ALT2 TSL 5 BASIC28.44■■■□□ 2.14
Ptchd4B9EKX1 1190005I06Rik-201ENSMUST00000123927 844 ntAPPRIS P2 TSL 1 (best) BASIC28.44■■■□□ 2.14
Ptchd4B9EKX1 Nrtn-201ENSMUST00000044752 1023 ntAPPRIS P1 TSL 1 (best) BASIC28.42■■■□□ 2.14
Ptchd4B9EKX1 Ssbp3-203ENSMUST00000097934 1742 ntAPPRIS ALT2 TSL 5 BASIC28.42■■■□□ 2.14
Ptchd4B9EKX1 A530058N18Rik-207ENSMUST00000152254 1211 ntTSL 1 (best) BASIC28.41■■■□□ 2.14
Ptchd4B9EKX1 Pradc1-201ENSMUST00000032080 1038 ntAPPRIS P1 TSL 1 (best) BASIC28.41■■■□□ 2.14
Ptchd4B9EKX1 Gm527-203ENSMUST00000220993 1090 ntTSL 5 BASIC28.4■■■□□ 2.14
Ptchd4B9EKX1 Mocs3-201ENSMUST00000099071 1973 ntAPPRIS P1 BASIC28.39■■■□□ 2.13
Ptchd4B9EKX1 Aard-201ENSMUST00000090025 1348 ntAPPRIS P1 TSL 1 (best) BASIC28.38■■■□□ 2.13
Ptchd4B9EKX1 Macrod2-205ENSMUST00000110063 845 ntTSL 5 BASIC28.37■■■□□ 2.13
Ptchd4B9EKX1 Frs3-201ENSMUST00000113296 2144 ntAPPRIS P1 TSL 1 (best) BASIC28.35■■■□□ 2.13
Ptchd4B9EKX1 Lsm4-204ENSMUST00000210071 575 ntTSL 5 BASIC28.33■■■□□ 2.13
Ptchd4B9EKX1 Gm45855-201ENSMUST00000212546 880 ntBASIC28.32■■■□□ 2.12
Ptchd4B9EKX1 Tcfl5-201ENSMUST00000037877 2225 ntAPPRIS P1 TSL 1 (best) BASIC28.32■■■□□ 2.12
Ptchd4B9EKX1 Ube2f-202ENSMUST00000171112 1547 ntAPPRIS P1 TSL 1 (best) BASIC28.31■■■□□ 2.12
Ptchd4B9EKX1 Vsig8-202ENSMUST00000177086 1519 ntTSL 1 (best) BASIC28.31■■■□□ 2.12
Ptchd4B9EKX1 E2f4-201ENSMUST00000015003 1993 ntAPPRIS P1 TSL 1 (best) BASIC28.3■■■□□ 2.12
Ptchd4B9EKX1 Rbfox2-201ENSMUST00000048145 1720 ntTSL 1 (best) BASIC28.3■■■□□ 2.12
Ptchd4B9EKX1 Tnfsfm13-202ENSMUST00000174159 1470 ntAPPRIS ALT2 TSL 2 BASIC28.3■■■□□ 2.12
Ptchd4B9EKX1 E330040D14Rik-201ENSMUST00000192299 1374 ntBASIC28.29■■■□□ 2.12
Ptchd4B9EKX1 Fndc10-201ENSMUST00000099265 2140 ntAPPRIS P1 BASIC28.29■■■□□ 2.12
Ptchd4B9EKX1 Orai1-202ENSMUST00000121652 1875 ntAPPRIS P1 TSL 1 (best) BASIC28.29■■■□□ 2.12
Ptchd4B9EKX1 Dedd-201ENSMUST00000064950 1618 ntAPPRIS P1 TSL 1 (best) BASIC28.27■■■□□ 2.12
Ptchd4B9EKX1 Pwwp2a-202ENSMUST00000094294 1814 ntTSL 5 BASIC28.26■■■□□ 2.11
Ptchd4B9EKX1 Fbxo6-201ENSMUST00000030858 1346 ntAPPRIS P1 TSL 1 (best) BASIC28.25■■■□□ 2.11
Ptchd4B9EKX1 Ubl4a-207ENSMUST00000178691 1038 ntAPPRIS P1 TSL 2 BASIC28.25■■■□□ 2.11
Ptchd4B9EKX1 Gm9397-201ENSMUST00000200125 605 ntBASIC28.23■■■□□ 2.11
Ptchd4B9EKX1 Dtnbp1-201ENSMUST00000072329 1362 ntAPPRIS P2 TSL 1 (best) BASIC28.22■■■□□ 2.11
Ptchd4B9EKX1 Raly-203ENSMUST00000109701 1709 ntAPPRIS P3 TSL 1 (best) BASIC28.21■■■□□ 2.11
Ptchd4B9EKX1 Tnfsfm13-201ENSMUST00000108649 1049 ntAPPRIS ALT2 TSL 5 BASIC28.21■■■□□ 2.11
Ptchd4B9EKX1 Cds2-203ENSMUST00000110158 1247 ntTSL 1 (best) BASIC28.21■■■□□ 2.11
Ptchd4B9EKX1 Stk24-201ENSMUST00000079817 2676 ntAPPRIS P1 TSL 1 (best) BASIC28.21■■■□□ 2.11
Ptchd4B9EKX1 Cdk2ap1-201ENSMUST00000031341 1315 ntAPPRIS P2 TSL 1 (best) BASIC28.2■■■□□ 2.11
Ptchd4B9EKX1 Ranbp1-202ENSMUST00000115645 1085 ntAPPRIS P1 TSL 1 (best) BASIC28.2■■■□□ 2.1
Ptchd4B9EKX1 Gkap1-201ENSMUST00000091579 1523 ntAPPRIS P1 TSL 1 (best) BASIC28.19■■■□□ 2.1
Ptchd4B9EKX1 1110008F13Rik-201ENSMUST00000029165 1045 ntAPPRIS P1 TSL 1 (best) BASIC28.19■■■□□ 2.1
Ptchd4B9EKX1 Orai1-201ENSMUST00000051016 1482 ntAPPRIS P1 TSL 1 (best) BASIC28.19■■■□□ 2.1
Ptchd4B9EKX1 Prelid3b-201ENSMUST00000016401 1553 ntAPPRIS P1 TSL 1 (best) BASIC28.18■■■□□ 2.1
Ptchd4B9EKX1 Mapk3-202ENSMUST00000057669 1800 ntAPPRIS P2 TSL 1 (best) BASIC28.17■■■□□ 2.1
Ptchd4B9EKX1 AC150314.2-201ENSMUST00000214135 834 ntTSL 5 BASIC28.16■■■□□ 2.1
Ptchd4B9EKX1 Capns1-201ENSMUST00000001845 1600 ntAPPRIS P2 TSL 5 BASIC28.16■■■□□ 2.1
Ptchd4B9EKX1 Qrich1-209ENSMUST00000194385 975 ntTSL 2 BASIC28.14■■■□□ 2.1
Ptchd4B9EKX1 Smarcc2-205ENSMUST00000218228 603 ntTSL 5 BASIC28.13■■■□□ 2.09
Ptchd4B9EKX1 Bok-201ENSMUST00000027499 1468 ntAPPRIS P1 TSL 1 (best) BASIC28.13■■■□□ 2.09
Ptchd4B9EKX1 March2-205ENSMUST00000173015 1418 ntTSL 3 BASIC28.11■■■□□ 2.09
Ptchd4B9EKX1 BC037032-205ENSMUST00000187080 508 ntTSL 5 BASIC28.11■■■□□ 2.09
Ptchd4B9EKX1 Mthfd2l-203ENSMUST00000202781 688 ntTSL 1 (best) BASIC28.1■■■□□ 2.09
Ptchd4B9EKX1 Spata1-201ENSMUST00000029839 1920 ntAPPRIS P1 TSL 1 (best) BASIC28.08■■■□□ 2.09
Ptchd4B9EKX1 4932443I19Rik-201ENSMUST00000166277 799 ntAPPRIS P2 TSL 1 (best) BASIC28.08■■■□□ 2.09
Ptchd4B9EKX1 Gltp-201ENSMUST00000012028 1762 ntAPPRIS P1 TSL 1 (best) BASIC28.07■■■□□ 2.08
Ptchd4B9EKX1 Lmo2-201ENSMUST00000111139 1434 ntTSL 5 BASIC28.07■■■□□ 2.08
Ptchd4B9EKX1 Sept11-208ENSMUST00000202308 1792 ntAPPRIS ALT1 TSL 5 BASIC28.06■■■□□ 2.08
Ptchd4B9EKX1 Ppp2r2d-201ENSMUST00000041097 2081 ntAPPRIS P1 TSL 1 (best) BASIC28.04■■■□□ 2.08
Ptchd4B9EKX1 Sowahd-201ENSMUST00000060057 1574 ntAPPRIS P1 BASIC28.04■■■□□ 2.08
Ptchd4B9EKX1 Bok-205ENSMUST00000201863 883 ntAPPRIS P1 TSL 5 BASIC28.03■■■□□ 2.08
Ptchd4B9EKX1 Crip2-201ENSMUST00000084882 1439 ntAPPRIS P1 TSL 1 (best) BASIC28.02■■■□□ 2.08
Ptchd4B9EKX1 Rnd2-201ENSMUST00000001347 1394 ntAPPRIS P1 TSL 1 (best) BASIC28.01■■■□□ 2.07
Ptchd4B9EKX1 C2cd4d-201ENSMUST00000169433 1321 ntAPPRIS P1 TSL 3 BASIC28■■■□□ 2.07
Ptchd4B9EKX1 Ctbp1-206ENSMUST00000201575 2091 ntTSL 1 (best) BASIC28■■■□□ 2.07
Ptchd4B9EKX1 1810026B05Rik-202ENSMUST00000184554 782 ntTSL 3 BASIC28■■■□□ 2.07
Ptchd4B9EKX1 1810026B05Rik-206ENSMUST00000187421 519 ntTSL 3 BASIC27.99■■■□□ 2.07
Ptchd4B9EKX1 Dut-202ENSMUST00000082122 1020 ntTSL 1 (best) BASIC27.99■■■□□ 2.07
Retrieved 100 of 76,532 protein–RNA pairs in 30.8 ms