Protein–RNA interactions for Protein: B9EKX1

Ptchd4, Patched domain-containing protein 4, mousemouse

Predictions only

Length 904 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ptchd4B9EKX1 Ldb1-208ENSMUST00000185355 2088 ntTSL 1 (best) BASIC28.95■■■□□ 2.22
Ptchd4B9EKX1 Sh3glb2-203ENSMUST00000113620 1694 ntTSL 1 (best) BASIC28.92■■■□□ 2.22
Ptchd4B9EKX1 Gm42517-201ENSMUST00000197216 1850 ntAPPRIS P1 BASIC28.91■■■□□ 2.22
Ptchd4B9EKX1 Cgref1-201ENSMUST00000031051 1442 ntAPPRIS P1 TSL 1 (best) BASIC28.91■■■□□ 2.22
Ptchd4B9EKX1 Slc25a28-201ENSMUST00000046038 1514 ntAPPRIS P1 TSL 1 (best) BASIC28.85■■■□□ 2.21
Ptchd4B9EKX1 Ube2ql1-201ENSMUST00000065118 2674 ntAPPRIS P1 TSL 1 (best) BASIC28.85■■■□□ 2.21
Ptchd4B9EKX1 Egln2-201ENSMUST00000080058 2107 ntAPPRIS P1 TSL 1 (best) BASIC28.84■■■□□ 2.21
Ptchd4B9EKX1 Calm3-201ENSMUST00000019514 2290 ntAPPRIS P1 TSL 1 (best) BASIC28.81■■■□□ 2.2
Ptchd4B9EKX1 Syt7-201ENSMUST00000073899 1605 ntAPPRIS P1 TSL 1 (best) BASIC28.81■■■□□ 2.2
Ptchd4B9EKX1 Fam60a-203ENSMUST00000111562 906 ntAPPRIS P1 TSL 3 BASIC28.81■■■□□ 2.2
Ptchd4B9EKX1 Lactb-202ENSMUST00000215172 1806 ntTSL 1 (best) BASIC28.8■■■□□ 2.2
Ptchd4B9EKX1 Crlf1-201ENSMUST00000008032 1644 ntAPPRIS P1 TSL 1 (best) BASIC28.8■■■□□ 2.2
Ptchd4B9EKX1 Dapk3-209ENSMUST00000219850 1482 ntAPPRIS P1 TSL 1 (best) BASIC28.79■■■□□ 2.2
Ptchd4B9EKX1 Gnai2-201ENSMUST00000055704 2215 ntAPPRIS P1 TSL 1 (best) BASIC28.77■■■□□ 2.2
Ptchd4B9EKX1 Gm5601-202ENSMUST00000207161 1437 ntTSL 1 (best) BASIC28.77■■■□□ 2.2
Ptchd4B9EKX1 Kcnmb4os2-201ENSMUST00000080943 1571 ntTSL 5 BASIC28.76■■■□□ 2.19
Ptchd4B9EKX1 Gm266-201ENSMUST00000010673 1215 ntAPPRIS P1 BASIC28.75■■■□□ 2.19
Ptchd4B9EKX1 Fcho2-203ENSMUST00000109403 1523 ntTSL 5 BASIC28.74■■■□□ 2.19
Ptchd4B9EKX1 Rpia-201ENSMUST00000066134 1829 ntAPPRIS P1 TSL 1 (best) BASIC28.73■■■□□ 2.19
Ptchd4B9EKX1 Eif2ak3-204ENSMUST00000162950 927 ntTSL 1 (best) BASIC28.73■■■□□ 2.19
Ptchd4B9EKX1 Abhd17a-201ENSMUST00000003436 1468 ntAPPRIS P1 TSL 1 (best) BASIC28.69■■■□□ 2.18
Ptchd4B9EKX1 Ccdc122-202ENSMUST00000095625 1195 ntAPPRIS ALT2 TSL 1 (best) BASIC28.68■■■□□ 2.18
Ptchd4B9EKX1 Gm10762-201ENSMUST00000099385 1133 ntAPPRIS P1 BASIC28.68■■■□□ 2.18
Ptchd4B9EKX1 CT030161.2-201ENSMUST00000218666 735 ntTSL 3 BASIC28.66■■■□□ 2.18
Ptchd4B9EKX1 Tprgl-201ENSMUST00000030896 1724 ntAPPRIS P1 TSL 1 (best) BASIC28.65■■■□□ 2.18
Ptchd4B9EKX1 A530058N18Rik-201ENSMUST00000128469 646 ntTSL 2 BASIC28.64■■■□□ 2.18
Ptchd4B9EKX1 Tdp2-203ENSMUST00000223804 1136 ntBASIC28.64■■■□□ 2.18
Ptchd4B9EKX1 Ldb1-207ENSMUST00000156585 2014 ntTSL 1 (best) BASIC28.62■■■□□ 2.17
Ptchd4B9EKX1 Gtf2a2-203ENSMUST00000119413 1034 ntAPPRIS P1 TSL 1 (best) BASIC28.61■■■□□ 2.17
Ptchd4B9EKX1 Tmeff1-202ENSMUST00000123476 1224 ntAPPRIS P1 TSL 1 (best) BASIC28.6■■■□□ 2.17
Ptchd4B9EKX1 Rpl19-ps4-201ENSMUST00000167150 625 ntBASIC28.6■■■□□ 2.17
Ptchd4B9EKX1 1700016A09Rik-201ENSMUST00000192004 835 ntBASIC28.57■■■□□ 2.16
Ptchd4B9EKX1 Wsb2-201ENSMUST00000031309 2421 ntAPPRIS P2 TSL 1 (best) BASIC28.57■■■□□ 2.16
Ptchd4B9EKX1 Fam241a-202ENSMUST00000199273 2234 ntAPPRIS P1 TSL 1 (best) BASIC28.55■■■□□ 2.16
Ptchd4B9EKX1 Dhrs13-203ENSMUST00000122342 1791 ntTSL 1 (best) BASIC28.53■■■□□ 2.16
Ptchd4B9EKX1 Trp53rkb-202ENSMUST00000065753 1375 ntTSL 1 (best) BASIC28.52■■■□□ 2.16
Ptchd4B9EKX1 Azin2-201ENSMUST00000030581 2063 ntAPPRIS P1 TSL 1 (best) BASIC28.5■■■□□ 2.15
Ptchd4B9EKX1 Tnfsf12-202ENSMUST00000181810 1435 ntAPPRIS P1 TSL 1 (best) BASIC28.46■■■□□ 2.15
Ptchd4B9EKX1 Hoxa13-201ENSMUST00000047993 1309 ntAPPRIS ALT2 TSL 5 BASIC28.44■■■□□ 2.14
Ptchd4B9EKX1 1190005I06Rik-201ENSMUST00000123927 844 ntAPPRIS P2 TSL 1 (best) BASIC28.44■■■□□ 2.14
Ptchd4B9EKX1 Nrtn-201ENSMUST00000044752 1023 ntAPPRIS P1 TSL 1 (best) BASIC28.42■■■□□ 2.14
Ptchd4B9EKX1 Ssbp3-203ENSMUST00000097934 1742 ntAPPRIS ALT2 TSL 5 BASIC28.42■■■□□ 2.14
Ptchd4B9EKX1 A530058N18Rik-207ENSMUST00000152254 1211 ntTSL 1 (best) BASIC28.41■■■□□ 2.14
Ptchd4B9EKX1 Pradc1-201ENSMUST00000032080 1038 ntAPPRIS P1 TSL 1 (best) BASIC28.41■■■□□ 2.14
Ptchd4B9EKX1 Gm527-203ENSMUST00000220993 1090 ntTSL 5 BASIC28.4■■■□□ 2.14
Ptchd4B9EKX1 Mocs3-201ENSMUST00000099071 1973 ntAPPRIS P1 BASIC28.39■■■□□ 2.13
Ptchd4B9EKX1 Aard-201ENSMUST00000090025 1348 ntAPPRIS P1 TSL 1 (best) BASIC28.38■■■□□ 2.13
Ptchd4B9EKX1 Macrod2-205ENSMUST00000110063 845 ntTSL 5 BASIC28.37■■■□□ 2.13
Ptchd4B9EKX1 Frs3-201ENSMUST00000113296 2144 ntAPPRIS P1 TSL 1 (best) BASIC28.35■■■□□ 2.13
Ptchd4B9EKX1 Lsm4-204ENSMUST00000210071 575 ntTSL 5 BASIC28.33■■■□□ 2.13
Ptchd4B9EKX1 Gm45855-201ENSMUST00000212546 880 ntBASIC28.32■■■□□ 2.12
Ptchd4B9EKX1 Tcfl5-201ENSMUST00000037877 2225 ntAPPRIS P1 TSL 1 (best) BASIC28.32■■■□□ 2.12
Ptchd4B9EKX1 Ube2f-202ENSMUST00000171112 1547 ntAPPRIS P1 TSL 1 (best) BASIC28.31■■■□□ 2.12
Ptchd4B9EKX1 Vsig8-202ENSMUST00000177086 1519 ntTSL 1 (best) BASIC28.31■■■□□ 2.12
Ptchd4B9EKX1 E2f4-201ENSMUST00000015003 1993 ntAPPRIS P1 TSL 1 (best) BASIC28.3■■■□□ 2.12
Ptchd4B9EKX1 Rbfox2-201ENSMUST00000048145 1720 ntTSL 1 (best) BASIC28.3■■■□□ 2.12
Ptchd4B9EKX1 Tnfsfm13-202ENSMUST00000174159 1470 ntAPPRIS ALT2 TSL 2 BASIC28.3■■■□□ 2.12
Ptchd4B9EKX1 E330040D14Rik-201ENSMUST00000192299 1374 ntBASIC28.29■■■□□ 2.12
Ptchd4B9EKX1 Fndc10-201ENSMUST00000099265 2140 ntAPPRIS P1 BASIC28.29■■■□□ 2.12
Ptchd4B9EKX1 Orai1-202ENSMUST00000121652 1875 ntAPPRIS P1 TSL 1 (best) BASIC28.29■■■□□ 2.12
Ptchd4B9EKX1 Dedd-201ENSMUST00000064950 1618 ntAPPRIS P1 TSL 1 (best) BASIC28.27■■■□□ 2.12
Ptchd4B9EKX1 Pwwp2a-202ENSMUST00000094294 1814 ntTSL 5 BASIC28.26■■■□□ 2.11
Ptchd4B9EKX1 Fbxo6-201ENSMUST00000030858 1346 ntAPPRIS P1 TSL 1 (best) BASIC28.25■■■□□ 2.11
Ptchd4B9EKX1 Ubl4a-207ENSMUST00000178691 1038 ntAPPRIS P1 TSL 2 BASIC28.25■■■□□ 2.11
Ptchd4B9EKX1 Gm9397-201ENSMUST00000200125 605 ntBASIC28.23■■■□□ 2.11
Ptchd4B9EKX1 Dtnbp1-201ENSMUST00000072329 1362 ntAPPRIS P2 TSL 1 (best) BASIC28.22■■■□□ 2.11
Ptchd4B9EKX1 Raly-203ENSMUST00000109701 1709 ntAPPRIS P3 TSL 1 (best) BASIC28.21■■■□□ 2.11
Ptchd4B9EKX1 Tnfsfm13-201ENSMUST00000108649 1049 ntAPPRIS ALT2 TSL 5 BASIC28.21■■■□□ 2.11
Ptchd4B9EKX1 Cds2-203ENSMUST00000110158 1247 ntTSL 1 (best) BASIC28.21■■■□□ 2.11
Ptchd4B9EKX1 Stk24-201ENSMUST00000079817 2676 ntAPPRIS P1 TSL 1 (best) BASIC28.21■■■□□ 2.11
Ptchd4B9EKX1 Cdk2ap1-201ENSMUST00000031341 1315 ntAPPRIS P2 TSL 1 (best) BASIC28.2■■■□□ 2.11
Ptchd4B9EKX1 Ranbp1-202ENSMUST00000115645 1085 ntAPPRIS P1 TSL 1 (best) BASIC28.2■■■□□ 2.1
Ptchd4B9EKX1 Gkap1-201ENSMUST00000091579 1523 ntAPPRIS P1 TSL 1 (best) BASIC28.19■■■□□ 2.1
Ptchd4B9EKX1 1110008F13Rik-201ENSMUST00000029165 1045 ntAPPRIS P1 TSL 1 (best) BASIC28.19■■■□□ 2.1
Ptchd4B9EKX1 Orai1-201ENSMUST00000051016 1482 ntAPPRIS P1 TSL 1 (best) BASIC28.19■■■□□ 2.1
Ptchd4B9EKX1 Prelid3b-201ENSMUST00000016401 1553 ntAPPRIS P1 TSL 1 (best) BASIC28.18■■■□□ 2.1
Ptchd4B9EKX1 Mapk3-202ENSMUST00000057669 1800 ntAPPRIS P2 TSL 1 (best) BASIC28.17■■■□□ 2.1
Ptchd4B9EKX1 AC150314.2-201ENSMUST00000214135 834 ntTSL 5 BASIC28.16■■■□□ 2.1
Ptchd4B9EKX1 Capns1-201ENSMUST00000001845 1600 ntAPPRIS P2 TSL 5 BASIC28.16■■■□□ 2.1
Ptchd4B9EKX1 Qrich1-209ENSMUST00000194385 975 ntTSL 2 BASIC28.14■■■□□ 2.1
Ptchd4B9EKX1 Smarcc2-205ENSMUST00000218228 603 ntTSL 5 BASIC28.13■■■□□ 2.09
Ptchd4B9EKX1 Bok-201ENSMUST00000027499 1468 ntAPPRIS P1 TSL 1 (best) BASIC28.13■■■□□ 2.09
Ptchd4B9EKX1 March2-205ENSMUST00000173015 1418 ntTSL 3 BASIC28.11■■■□□ 2.09
Ptchd4B9EKX1 BC037032-205ENSMUST00000187080 508 ntTSL 5 BASIC28.11■■■□□ 2.09
Ptchd4B9EKX1 Mthfd2l-203ENSMUST00000202781 688 ntTSL 1 (best) BASIC28.1■■■□□ 2.09
Ptchd4B9EKX1 Spata1-201ENSMUST00000029839 1920 ntAPPRIS P1 TSL 1 (best) BASIC28.08■■■□□ 2.09
Ptchd4B9EKX1 4932443I19Rik-201ENSMUST00000166277 799 ntAPPRIS P2 TSL 1 (best) BASIC28.08■■■□□ 2.09
Ptchd4B9EKX1 Gltp-201ENSMUST00000012028 1762 ntAPPRIS P1 TSL 1 (best) BASIC28.07■■■□□ 2.08
Ptchd4B9EKX1 Lmo2-201ENSMUST00000111139 1434 ntTSL 5 BASIC28.07■■■□□ 2.08
Ptchd4B9EKX1 Sept11-208ENSMUST00000202308 1792 ntAPPRIS ALT1 TSL 5 BASIC28.06■■■□□ 2.08
Ptchd4B9EKX1 Ppp2r2d-201ENSMUST00000041097 2081 ntAPPRIS P1 TSL 1 (best) BASIC28.04■■■□□ 2.08
Ptchd4B9EKX1 Sowahd-201ENSMUST00000060057 1574 ntAPPRIS P1 BASIC28.04■■■□□ 2.08
Ptchd4B9EKX1 Bok-205ENSMUST00000201863 883 ntAPPRIS P1 TSL 5 BASIC28.03■■■□□ 2.08
Ptchd4B9EKX1 Crip2-201ENSMUST00000084882 1439 ntAPPRIS P1 TSL 1 (best) BASIC28.02■■■□□ 2.08
Ptchd4B9EKX1 Rnd2-201ENSMUST00000001347 1394 ntAPPRIS P1 TSL 1 (best) BASIC28.01■■■□□ 2.07
Ptchd4B9EKX1 C2cd4d-201ENSMUST00000169433 1321 ntAPPRIS P1 TSL 3 BASIC28■■■□□ 2.07
Ptchd4B9EKX1 Ctbp1-206ENSMUST00000201575 2091 ntTSL 1 (best) BASIC28■■■□□ 2.07
Ptchd4B9EKX1 1810026B05Rik-202ENSMUST00000184554 782 ntTSL 3 BASIC28■■■□□ 2.07
Ptchd4B9EKX1 1810026B05Rik-206ENSMUST00000187421 519 ntTSL 3 BASIC27.99■■■□□ 2.07
Ptchd4B9EKX1 Dut-202ENSMUST00000082122 1020 ntTSL 1 (best) BASIC27.99■■■□□ 2.07
Retrieved 100 of 76,532 protein–RNA pairs in 15.8 ms