Protein–RNA interactions for Protein: A2AX52

Col6a4, Collagen alpha-4(VI) chain, mousemouse

Predictions only

Length 2,309 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Col6a4A2AX52 Fbxo6-203ENSMUST00000105706 1938 ntAPPRIS P1 TSL 1 (best) BASIC22,76■■□□□ 1,23
Col6a4A2AX52 Rab22a-202ENSMUST00000109110 849 ntTSL 5 BASIC22,76■■□□□ 1,23
Col6a4A2AX52 Gm42517-201ENSMUST00000197216 1850 ntAPPRIS P1 BASIC22,74■■□□□ 1,23
Col6a4A2AX52 Vsig8-201ENSMUST00000061835 1801 ntAPPRIS P1 TSL 1 (best) BASIC22,72■■□□□ 1,23
Col6a4A2AX52 Btf3-201ENSMUST00000022163 1091 ntTSL 1 (best) BASIC22,71■■□□□ 1,23
Col6a4A2AX52 Gm26566-201ENSMUST00000181601 1038 ntAPPRIS P1 BASIC22,69■■□□□ 1,22
Col6a4A2AX52 Tmeff1-202ENSMUST00000123476 1224 ntAPPRIS P1 TSL 1 (best) BASIC22,69■■□□□ 1,22
Col6a4A2AX52 Gm5987-201ENSMUST00000196433 1151 ntBASIC22,69■■□□□ 1,22
Col6a4A2AX52 2810459M11Rik-201ENSMUST00000027429 1225 ntAPPRIS ALT2 TSL 1 (best) BASIC22,66■■□□□ 1,22
Col6a4A2AX52 Spg7-201ENSMUST00000108868 845 ntTSL 2 BASIC22,65■■□□□ 1,22
Col6a4A2AX52 Gnai2-202ENSMUST00000192615 1777 ntAPPRIS P1 TSL 1 (best) BASIC22,64■■□□□ 1,22
Col6a4A2AX52 Gm2018-201ENSMUST00000140754 478 ntTSL 2 BASIC22,62■■□□□ 1,21
Col6a4A2AX52 Gm5601-202ENSMUST00000207161 1437 ntTSL 1 (best) BASIC22,58■■□□□ 1,2
Col6a4A2AX52 Aard-201ENSMUST00000090025 1348 ntAPPRIS P1 TSL 1 (best) BASIC22,56■■□□□ 1,2
Col6a4A2AX52 Dedd-201ENSMUST00000064950 1618 ntAPPRIS P1 TSL 1 (best) BASIC22,54■■□□□ 1,2
Col6a4A2AX52 Crip2-201ENSMUST00000084882 1439 ntAPPRIS P1 TSL 1 (best) BASIC22,54■■□□□ 1,2
Col6a4A2AX52 Kcnmb4os2-201ENSMUST00000080943 1571 ntTSL 5 BASIC22,54■■□□□ 1,2
Col6a4A2AX52 Ube2e2-205ENSMUST00000150727 1523 ntAPPRIS P1 TSL 1 (best) BASIC22,53■■□□□ 1,2
Col6a4A2AX52 C2cd4d-201ENSMUST00000169433 1321 ntAPPRIS P1 TSL 3 BASIC22,53■■□□□ 1,2
Col6a4A2AX52 Mthfd2l-203ENSMUST00000202781 688 ntTSL 1 (best) BASIC22,53■■□□□ 1,2
Col6a4A2AX52 1110008F13Rik-201ENSMUST00000029165 1045 ntAPPRIS P1 TSL 1 (best) BASIC22,52■■□□□ 1,2
Col6a4A2AX52 Lrrc1-204ENSMUST00000183734 2113 ntTSL 1 (best) BASIC22,51■■□□□ 1,19
Col6a4A2AX52 Tsen34-203ENSMUST00000108629 1238 ntTSL 1 (best) BASIC22,5■■□□□ 1,19
Col6a4A2AX52 Hoxa13-201ENSMUST00000047993 1309 ntAPPRIS ALT2 TSL 5 BASIC22,5■■□□□ 1,19
Col6a4A2AX52 Capns1-201ENSMUST00000001845 1600 ntAPPRIS P2 TSL 5 BASIC22,49■■□□□ 1,19
Col6a4A2AX52 A330023F24Rik-201ENSMUST00000181226 955 ntTSL 1 (best) BASIC22,49■■□□□ 1,19
Col6a4A2AX52 Mxra7-202ENSMUST00000047715 757 ntAPPRIS ALT2 TSL 1 (best) BASIC22,49■■□□□ 1,19
Col6a4A2AX52 Cib1-201ENSMUST00000065163 1047 ntAPPRIS P1 TSL 1 (best) BASIC22,49■■□□□ 1,19
Col6a4A2AX52 Orai1-201ENSMUST00000051016 1482 ntAPPRIS P1 TSL 1 (best) BASIC22,49■■□□□ 1,19
Col6a4A2AX52 Zic2-201ENSMUST00000075888 2440 ntAPPRIS P1 TSL 1 (best) BASIC22,49■■□□□ 1,19
Col6a4A2AX52 Dut-202ENSMUST00000082122 1020 ntTSL 1 (best) BASIC22,47■■□□□ 1,19
Col6a4A2AX52 A530058N18Rik-207ENSMUST00000152254 1211 ntTSL 1 (best) BASIC22,47■■□□□ 1,19
Col6a4A2AX52 Gm9397-201ENSMUST00000200125 605 ntBASIC22,47■■□□□ 1,19
Col6a4A2AX52 Cenpv-201ENSMUST00000018653 1032 ntAPPRIS P1 TSL 1 (best) BASIC22,46■■□□□ 1,19
Col6a4A2AX52 1810026B05Rik-202ENSMUST00000184554 782 ntTSL 3 BASIC22,45■■□□□ 1,18
Col6a4A2AX52 Ppp1r14b-201ENSMUST00000070850 919 ntAPPRIS P1 TSL 1 (best) BASIC22,45■■□□□ 1,18
Col6a4A2AX52 Gm20503-201ENSMUST00000174664 1294 ntAPPRIS P1 TSL 5 BASIC22,45■■□□□ 1,18
Col6a4A2AX52 Snx24-202ENSMUST00000165032 1880 ntAPPRIS P1 TSL 1 (best) BASIC22,43■■□□□ 1,18
Col6a4A2AX52 Gng13-201ENSMUST00000115108 347 ntAPPRIS P1 TSL 1 (best) BASIC22,43■■□□□ 1,18
Col6a4A2AX52 C1qtnf5-201ENSMUST00000114815 1215 ntAPPRIS P1 TSL 1 (best) BASIC22,42■■□□□ 1,18
Col6a4A2AX52 AC158592.1-201ENSMUST00000215560 1113 ntTSL 5 BASIC22,42■■□□□ 1,18
Col6a4A2AX52 Cetn4-202ENSMUST00000075537 762 ntTSL 3 BASIC22,41■■□□□ 1,18
Col6a4A2AX52 Crlf1-201ENSMUST00000008032 1644 ntAPPRIS P1 TSL 1 (best) BASIC22,4■■□□□ 1,18
Col6a4A2AX52 Sept3-202ENSMUST00000116423 2467 ntAPPRIS P1 TSL 1 (best) BASIC22,39■■□□□ 1,17
Col6a4A2AX52 Ube2q2-202ENSMUST00000121677 1680 ntAPPRIS ALT2 TSL 5 BASIC22,39■■□□□ 1,17
Col6a4A2AX52 Evx2-202ENSMUST00000173623 1428 ntAPPRIS P2 TSL 1 (best) BASIC22,39■■□□□ 1,17
Col6a4A2AX52 Nemp1-202ENSMUST00000118612 1522 ntTSL 1 (best) BASIC22,37■■□□□ 1,17
Col6a4A2AX52 BC037032-205ENSMUST00000187080 508 ntTSL 5 BASIC22,36■■□□□ 1,17
Col6a4A2AX52 Trp53rkb-202ENSMUST00000065753 1375 ntTSL 1 (best) BASIC22,36■■□□□ 1,17
Col6a4A2AX52 Ccm2l-201ENSMUST00000109800 2158 ntAPPRIS P1 TSL 5 BASIC22,36■■□□□ 1,17
Col6a4A2AX52 AY074887-201ENSMUST00000054018 769 ntAPPRIS P1 BASIC22,35■■□□□ 1,17
Col6a4A2AX52 Abhd17a-201ENSMUST00000003436 1468 ntAPPRIS P1 TSL 1 (best) BASIC22,35■■□□□ 1,17
Col6a4A2AX52 9230104M06Rik-201ENSMUST00000180971 1963 ntBASIC22,35■■□□□ 1,17
Col6a4A2AX52 Syt7-201ENSMUST00000073899 1605 ntAPPRIS P1 TSL 1 (best) BASIC22,35■■□□□ 1,17
Col6a4A2AX52 Vsig8-202ENSMUST00000177086 1519 ntTSL 1 (best) BASIC22,35■■□□□ 1,17
Col6a4A2AX52 March2-205ENSMUST00000173015 1418 ntTSL 3 BASIC22,34■■□□□ 1,17
Col6a4A2AX52 Gm17110-201ENSMUST00000171248 735 ntTSL 3 BASIC22,34■■□□□ 1,17
Col6a4A2AX52 Mipep-204ENSMUST00000225043 1548 ntBASIC22,34■■□□□ 1,17
Col6a4A2AX52 Pkdcc-204ENSMUST00000170794 2446 ntAPPRIS P1 TSL 1 (best) BASIC22,34■■□□□ 1,17
Col6a4A2AX52 Gm29254-202ENSMUST00000189302 883 ntTSL 1 (best) BASIC22,32■■□□□ 1,16
Col6a4A2AX52 Macrod2-205ENSMUST00000110063 845 ntTSL 5 BASIC22,3■■□□□ 1,16
Col6a4A2AX52 Bcl7c-207ENSMUST00000207019 654 ntTSL 3 BASIC22,3■■□□□ 1,16
Col6a4A2AX52 Dapk3-209ENSMUST00000219850 1482 ntAPPRIS P1 TSL 1 (best) BASIC22,29■■□□□ 1,16
Col6a4A2AX52 Qrich1-209ENSMUST00000194385 975 ntTSL 2 BASIC22,28■■□□□ 1,16
Col6a4A2AX52 Ube2ql1-201ENSMUST00000065118 2674 ntAPPRIS P1 TSL 1 (best) BASIC22,28■■□□□ 1,16
Col6a4A2AX52 Zfyve21-201ENSMUST00000021714 1308 ntAPPRIS P2 TSL 1 (best) BASIC22,25■■□□□ 1,15
Col6a4A2AX52 Fbxo6-201ENSMUST00000030858 1346 ntAPPRIS P1 TSL 1 (best) BASIC22,24■■□□□ 1,15
Col6a4A2AX52 1810026B05Rik-206ENSMUST00000187421 519 ntTSL 3 BASIC22,24■■□□□ 1,15
Col6a4A2AX52 Shf-201ENSMUST00000048635 1431 ntAPPRIS P2 TSL 1 (best) BASIC22,24■■□□□ 1,15
Col6a4A2AX52 Gm12523-201ENSMUST00000148844 599 ntTSL 5 BASIC22,22■■□□□ 1,15
Col6a4A2AX52 Naa20-201ENSMUST00000002805 1172 ntTSL 1 (best) BASIC22,17■■□□□ 1,14
Col6a4A2AX52 Uba52-207ENSMUST00000140679 697 ntAPPRIS P1 TSL 2 BASIC22,16■■□□□ 1,14
Col6a4A2AX52 Eif5a-201ENSMUST00000043419 1437 ntAPPRIS P1 TSL 1 (best) BASIC22,15■■□□□ 1,14
Col6a4A2AX52 4930542C12Rik-201ENSMUST00000171096 1203 ntBASIC22,12■■□□□ 1,13
Col6a4A2AX52 Gm9939-201ENSMUST00000067161 1154 ntBASIC22,09■■□□□ 1,13
Col6a4A2AX52 Gm8503-201ENSMUST00000118131 455 ntBASIC22,07■■□□□ 1,12
Col6a4A2AX52 Gm24970-201ENSMUST00000175582 82 ntBASIC22,07■■□□□ 1,12
Col6a4A2AX52 Cadm4-201ENSMUST00000068023 2161 ntAPPRIS P1 TSL 1 (best) BASIC22,07■■□□□ 1,12
Col6a4A2AX52 Gnai2-201ENSMUST00000055704 2215 ntAPPRIS P1 TSL 1 (best) BASIC22,06■■□□□ 1,12
Col6a4A2AX52 Tmem243-201ENSMUST00000115365 1040 ntAPPRIS P1 TSL 2 BASIC22,05■■□□□ 1,12
Col6a4A2AX52 Stard3nl-210ENSMUST00000222869 1030 ntTSL 5 BASIC22,02■■□□□ 1,12
Col6a4A2AX52 Casp9-202ENSMUST00000097805 1498 ntTSL 1 (best) BASIC22■■□□□ 1,11
Col6a4A2AX52 Hrh3-208ENSMUST00000171736 906 ntTSL 5 BASIC22■■□□□ 1,11
Col6a4A2AX52 Dlx6os2-201ENSMUST00000178206 1354 ntBASIC21,99■■□□□ 1,11
Col6a4A2AX52 Lactb-202ENSMUST00000215172 1806 ntTSL 1 (best) BASIC21,99■■□□□ 1,11
Col6a4A2AX52 Scx-201ENSMUST00000043089 1136 ntAPPRIS P1 TSL 1 (best) BASIC21,99■■□□□ 1,11
Col6a4A2AX52 Dhrs13-203ENSMUST00000122342 1791 ntTSL 1 (best) BASIC21,99■■□□□ 1,11
Col6a4A2AX52 Ube2f-202ENSMUST00000171112 1547 ntAPPRIS P1 TSL 1 (best) BASIC21,98■■□□□ 1,11
Col6a4A2AX52 Rnd2-201ENSMUST00000001347 1394 ntAPPRIS P1 TSL 1 (best) BASIC21,97■■□□□ 1,11
Col6a4A2AX52 Macrod1-201ENSMUST00000040261 1274 ntAPPRIS P1 TSL 1 (best) BASIC21,96■■□□□ 1,11
Col6a4A2AX52 Junos-204ENSMUST00000128094 830 ntTSL 1 (best) BASIC21,95■■□□□ 1,1
Col6a4A2AX52 Atp1b3-201ENSMUST00000034983 1994 ntAPPRIS P1 TSL 1 (best) BASIC21,95■■□□□ 1,1
Col6a4A2AX52 Stradb-202ENSMUST00000114296 1348 ntTSL 1 (best) BASIC21,94■■□□□ 1,1
Col6a4A2AX52 Sowahd-201ENSMUST00000060057 1574 ntAPPRIS P1 BASIC21,91■■□□□ 1,1
Col6a4A2AX52 Wsb2-201ENSMUST00000031309 2421 ntAPPRIS P2 TSL 1 (best) BASIC21,91■■□□□ 1,1
Col6a4A2AX52 Tmem259-201ENSMUST00000052885 2225 ntAPPRIS P1 TSL 1 (best) BASIC21,9■■□□□ 1,1
Col6a4A2AX52 E330040D14Rik-201ENSMUST00000192299 1374 ntBASIC21,89■■□□□ 1,09
Col6a4A2AX52 Egln2-201ENSMUST00000080058 2107 ntAPPRIS P1 TSL 1 (best) BASIC21,87■■□□□ 1,09
Col6a4A2AX52 Dtnbp1-202ENSMUST00000110128 1305 ntAPPRIS ALT2 TSL 5 BASIC21,87■■□□□ 1,09
Col6a4A2AX52 Gm26699-201ENSMUST00000180825 2291 ntTSL 5 BASIC21,86■■□□□ 1,09
Retrieved 100 of 76,532 protein–RNA pairs in 11,7 ms