Protein–RNA interactions for Protein: A1A546

Isx, Intestine-specific homeobox, mousemouse

Predictions only

Length 240 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
IsxA1A546 Maf-201ENSMUST00000069009 3223 ntAPPRIS ALT2 TSL 1 (best) BASIC24.26■■□□□ 1.47
IsxA1A546 Uncx-201ENSMUST00000172997 2498 ntAPPRIS P1 TSL 1 (best) BASIC24.26■■□□□ 1.47
IsxA1A546 Tpm1-216ENSMUST00000113707 1898 ntTSL 1 (best) BASIC24.24■■□□□ 1.47
IsxA1A546 Tmem59-201ENSMUST00000030361 1775 ntAPPRIS P1 TSL 1 (best) BASIC24.23■■□□□ 1.47
IsxA1A546 Kdm2a-203ENSMUST00000116571 2413 ntTSL 1 (best) BASIC24.22■■□□□ 1.47
IsxA1A546 Lemd2-201ENSMUST00000055117 2595 ntAPPRIS P1 TSL 1 (best) BASIC24.2■■□□□ 1.46
IsxA1A546 Pfn2-202ENSMUST00000119344 1879 ntTSL 1 (best) BASIC24.19■■□□□ 1.46
IsxA1A546 Ctbp1-201ENSMUST00000079746 2279 ntAPPRIS P3 TSL 1 (best) BASIC24.17■■□□□ 1.46
IsxA1A546 Ssx2ip-202ENSMUST00000106149 2416 ntAPPRIS ALT2 TSL 1 (best) BASIC24.16■■□□□ 1.46
IsxA1A546 Ildr2-207ENSMUST00000195557 1947 ntAPPRIS ALT2 TSL 1 (best) BASIC24.16■■□□□ 1.46
IsxA1A546 Gm43445-201ENSMUST00000198564 2091 ntBASIC24.16■■□□□ 1.46
IsxA1A546 Arl2bp-201ENSMUST00000034228 2063 ntAPPRIS P1 TSL 1 (best) BASIC24.16■■□□□ 1.46
IsxA1A546 St6galnac6-204ENSMUST00000095045 2536 ntAPPRIS ALT1 TSL 1 (best) BASIC24.16■■□□□ 1.46
IsxA1A546 Ric1-206ENSMUST00000162184 2157 ntTSL 1 (best) BASIC24.14■■□□□ 1.45
IsxA1A546 Zfp131-207ENSMUST00000224946 1783 ntBASIC24.14■■□□□ 1.45
IsxA1A546 Zfp787-201ENSMUST00000094870 1897 ntAPPRIS P1 TSL 1 (best) BASIC24.13■■□□□ 1.45
IsxA1A546 Trp53i13-201ENSMUST00000060417 1463 ntAPPRIS P2 TSL 1 (best) BASIC24.12■■□□□ 1.45
IsxA1A546 Gm960-202ENSMUST00000177696 2262 ntAPPRIS P2 TSL 5 BASIC24.1■■□□□ 1.45
IsxA1A546 Arhgap22-201ENSMUST00000111955 2148 ntTSL 1 (best) BASIC24.1■■□□□ 1.45
IsxA1A546 Pwwp2a-202ENSMUST00000094294 1814 ntTSL 5 BASIC24.1■■□□□ 1.45
IsxA1A546 Ryk-201ENSMUST00000035142 2852 ntAPPRIS ALT2 TSL 1 (best) BASIC24.09■■□□□ 1.45
IsxA1A546 Galnt10-202ENSMUST00000108846 1745 ntTSL 1 (best) BASIC24.07■■□□□ 1.44
IsxA1A546 Syce2-204ENSMUST00000170296 929 ntAPPRIS ALT2 TSL 2 BASIC24.07■■□□□ 1.44
IsxA1A546 Ttc19-202ENSMUST00000101075 2193 ntAPPRIS ALT2 TSL 1 (best) BASIC24.05■■□□□ 1.44
IsxA1A546 Reep6-202ENSMUST00000105354 2208 ntAPPRIS P3 TSL 1 (best) BASIC24.04■■□□□ 1.44
IsxA1A546 Reep6-205ENSMUST00000105358 2208 ntTSL 1 (best) BASIC24.04■■□□□ 1.44
IsxA1A546 Lactb-201ENSMUST00000034929 2031 ntAPPRIS P1 TSL 1 (best) BASIC24.02■■□□□ 1.44
IsxA1A546 Amer2-203ENSMUST00000225247 2662 ntBASIC23.99■■□□□ 1.43
IsxA1A546 Gm45716-202ENSMUST00000134929 2031 ntAPPRIS P1 TSL 1 (best) BASIC23.99■■□□□ 1.43
IsxA1A546 Ywhah-201ENSMUST00000019109 1764 ntAPPRIS P1 TSL 1 (best) BASIC23.98■■□□□ 1.43
IsxA1A546 Ildr2-205ENSMUST00000193860 2320 ntTSL 1 (best) BASIC23.98■■□□□ 1.43
IsxA1A546 Gpr27-201ENSMUST00000101122 2388 ntAPPRIS P1 BASIC23.98■■□□□ 1.43
IsxA1A546 Adgrb2-207ENSMUST00000120204 5170 ntAPPRIS ALT2 TSL 1 (best) BASIC23.97■■□□□ 1.43
IsxA1A546 Ebag9-203ENSMUST00000227691 1945 ntAPPRIS P1 BASIC23.97■■□□□ 1.43
IsxA1A546 Drap1-201ENSMUST00000025853 992 ntAPPRIS P1 TSL 1 (best) BASIC23.97■■□□□ 1.43
IsxA1A546 Maz-201ENSMUST00000032916 2347 ntTSL 1 (best) BASIC23.95■■□□□ 1.42
IsxA1A546 Rnf220-212ENSMUST00000221654 1949 ntTSL 1 (best) BASIC23.92■■□□□ 1.42
IsxA1A546 Rnf149-204ENSMUST00000195705 389 ntTSL 3 BASIC23.91■■□□□ 1.42
IsxA1A546 Bin1-202ENSMUST00000091967 2118 ntAPPRIS ALT2 TSL 1 (best) BASIC23.91■■□□□ 1.42
IsxA1A546 Smad7-202ENSMUST00000168918 1882 ntAPPRIS P1 TSL 1 (best) BASIC23.88■■□□□ 1.41
IsxA1A546 Crk-202ENSMUST00000093115 965 ntTSL 1 (best) BASIC23.88■■□□□ 1.41
IsxA1A546 Raly-201ENSMUST00000029120 1802 ntAPPRIS ALT2 TSL 5 BASIC23.88■■□□□ 1.41
IsxA1A546 Rab40c-209ENSMUST00000179998 2456 ntAPPRIS P1 TSL 5 BASIC23.86■■□□□ 1.41
IsxA1A546 Gsk3a-202ENSMUST00000108411 2248 ntAPPRIS ALT2 TSL 5 BASIC23.86■■□□□ 1.41
IsxA1A546 Irak1-207ENSMUST00000114360 2441 ntAPPRIS ALT2 TSL 1 (best) BASIC23.85■■□□□ 1.41
IsxA1A546 Adgrb1-203ENSMUST00000185682 2744 ntTSL 1 (best) BASIC23.85■■□□□ 1.41
IsxA1A546 Hdgf-201ENSMUST00000005017 2245 ntAPPRIS P1 TSL 1 (best) BASIC23.85■■□□□ 1.41
IsxA1A546 Pfdn2-202ENSMUST00000135941 1735 ntAPPRIS P1 TSL 1 (best) BASIC23.84■■□□□ 1.41
IsxA1A546 Mpp6-203ENSMUST00000166318 2222 ntTSL 1 (best) BASIC23.83■■□□□ 1.41
IsxA1A546 Smurf1-202ENSMUST00000100461 2725 ntAPPRIS ALT1 TSL 1 (best) BASIC23.83■■□□□ 1.41
IsxA1A546 Fcho2-203ENSMUST00000109403 1523 ntTSL 5 BASIC23.83■■□□□ 1.41
IsxA1A546 Gm27325-201ENSMUST00000175467 74 ntBASIC23.82■■□□□ 1.4
IsxA1A546 Raly-204ENSMUST00000116389 1759 ntAPPRIS ALT2 TSL 5 BASIC23.82■■□□□ 1.4
IsxA1A546 Zxdb-201ENSMUST00000101388 5619 ntAPPRIS P1 BASIC23.82■■□□□ 1.4
IsxA1A546 2410017I17Rik-202ENSMUST00000090537 2053 ntTSL 2 BASIC23.8■■□□□ 1.4
IsxA1A546 Mypop-203ENSMUST00000131087 1951 ntAPPRIS P1 TSL 5 BASIC23.8■■□□□ 1.4
IsxA1A546 Clk2-203ENSMUST00000121931 2112 ntAPPRIS ALT1 TSL 5 BASIC23.8■■□□□ 1.4
IsxA1A546 Crk-204ENSMUST00000108426 671 ntTSL 3 BASIC23.79■■□□□ 1.4
IsxA1A546 Rcor2-201ENSMUST00000066646 2801 ntAPPRIS P1 TSL 1 (best) BASIC23.79■■□□□ 1.4
IsxA1A546 Gm960-204ENSMUST00000225896 2202 ntAPPRIS ALT2 BASIC23.79■■□□□ 1.4
IsxA1A546 Nectin3-203ENSMUST00000096052 1746 ntAPPRIS ALT2 TSL 1 (best) BASIC23.78■■□□□ 1.4
IsxA1A546 Vps37d-201ENSMUST00000067935 1544 ntAPPRIS P1 TSL 1 (best) BASIC23.78■■□□□ 1.4
IsxA1A546 Casp9-202ENSMUST00000097805 1498 ntTSL 1 (best) BASIC23.77■■□□□ 1.4
IsxA1A546 Klhl25-205ENSMUST00000206019 2299 ntAPPRIS P1 TSL 1 (best) BASIC23.75■■□□□ 1.39
IsxA1A546 Gltp-201ENSMUST00000012028 1762 ntAPPRIS P1 TSL 1 (best) BASIC23.74■■□□□ 1.39
IsxA1A546 Kansl2-201ENSMUST00000023727 2311 ntAPPRIS ALT2 TSL 5 BASIC23.74■■□□□ 1.39
IsxA1A546 Fezf2-202ENSMUST00000224023 1917 ntBASIC23.74■■□□□ 1.39
IsxA1A546 Agpat2-201ENSMUST00000028286 1489 ntAPPRIS P1 TSL 1 (best) BASIC23.74■■□□□ 1.39
IsxA1A546 Tmem240-201ENSMUST00000127188 1308 ntAPPRIS P1 TSL 2 BASIC23.73■■□□□ 1.39
IsxA1A546 Rgs7-206ENSMUST00000194555 2431 ntAPPRIS ALT2 TSL 1 (best) BASIC23.73■■□□□ 1.39
IsxA1A546 Ring1-201ENSMUST00000025183 2034 ntAPPRIS P1 TSL 1 (best) BASIC23.72■■□□□ 1.39
IsxA1A546 Zfp513-202ENSMUST00000114590 2228 ntAPPRIS P1 TSL 1 (best) BASIC23.72■■□□□ 1.39
IsxA1A546 Bzw1-202ENSMUST00000186949 1492 ntTSL 5 BASIC23.72■■□□□ 1.39
IsxA1A546 Igfbp3-202ENSMUST00000135887 1709 ntAPPRIS P1 TSL 1 (best) BASIC23.7■■□□□ 1.39
IsxA1A546 Fkbp8-204ENSMUST00000119698 1799 ntAPPRIS P4 TSL 1 (best) BASIC23.7■■□□□ 1.38
IsxA1A546 Tspan3-201ENSMUST00000034876 1716 ntAPPRIS P1 TSL 1 (best) BASIC23.7■■□□□ 1.38
IsxA1A546 Prr3-201ENSMUST00000055454 2727 ntAPPRIS P3 TSL 1 (best) BASIC23.69■■□□□ 1.38
IsxA1A546 4921531C22Rik-201ENSMUST00000150145 1905 ntTSL 1 (best) BASIC23.69■■□□□ 1.38
IsxA1A546 Phf10-201ENSMUST00000024657 1663 ntAPPRIS P1 TSL 1 (best) BASIC23.69■■□□□ 1.38
IsxA1A546 Tmed7-201ENSMUST00000036030 1436 ntTSL 5 BASIC23.66■■□□□ 1.38
IsxA1A546 Tprgl-202ENSMUST00000105639 642 ntTSL 5 BASIC23.65■■□□□ 1.38
IsxA1A546 Arhgdia-201ENSMUST00000067936 2150 ntAPPRIS P1 TSL 1 (best) BASIC23.64■■□□□ 1.38
IsxA1A546 Clk2-202ENSMUST00000121212 2154 ntAPPRIS P3 TSL 1 (best) BASIC23.64■■□□□ 1.37
IsxA1A546 Pon2-201ENSMUST00000057792 2409 ntAPPRIS P1 TSL 1 (best) BASIC23.63■■□□□ 1.37
IsxA1A546 Marveld2-202ENSMUST00000163163 2187 ntTSL 1 (best) BASIC23.61■■□□□ 1.37
IsxA1A546 Rhobtb3-202ENSMUST00000109606 1676 ntTSL 1 (best) BASIC23.61■■□□□ 1.37
IsxA1A546 Grb2-202ENSMUST00000106495 2041 ntTSL 5 BASIC23.61■■□□□ 1.37
IsxA1A546 Cacng8-201ENSMUST00000092351 1380 ntAPPRIS P1 TSL 1 (best) BASIC23.57■■□□□ 1.36
IsxA1A546 AC153890.1-201ENSMUST00000220021 2469 ntBASIC23.56■■□□□ 1.36
IsxA1A546 Ubp1-203ENSMUST00000116492 2111 ntAPPRIS ALT1 TSL 1 (best) BASIC23.56■■□□□ 1.36
IsxA1A546 Rnf19b-201ENSMUST00000030584 2414 ntAPPRIS ALT2 TSL 5 BASIC23.54■■□□□ 1.36
IsxA1A546 Efna3-201ENSMUST00000029673 2363 ntAPPRIS P2 TSL 1 (best) BASIC23.54■■□□□ 1.36
IsxA1A546 Panx2-202ENSMUST00000161372 2314 ntTSL 1 (best) BASIC23.53■■□□□ 1.36
IsxA1A546 Kcna7-201ENSMUST00000107774 2182 ntAPPRIS P1 TSL 1 (best) BASIC23.53■■□□□ 1.36
IsxA1A546 Rcan1-202ENSMUST00000060005 2324 ntTSL 1 (best) BASIC23.5■■□□□ 1.35
IsxA1A546 Gm25262-201ENSMUST00000174934 133 ntBASIC23.5■■□□□ 1.35
IsxA1A546 Ssbp3-203ENSMUST00000097934 1742 ntAPPRIS ALT2 TSL 5 BASIC23.49■■□□□ 1.35
IsxA1A546 Neurog2-201ENSMUST00000029587 2227 ntAPPRIS P1 TSL 1 (best) BASIC23.48■■□□□ 1.35
IsxA1A546 Ube2q2-202ENSMUST00000121677 1680 ntAPPRIS ALT2 TSL 5 BASIC23.48■■□□□ 1.35
IsxA1A546 Maz-204ENSMUST00000206254 2282 ntTSL 5 BASIC23.47■■□□□ 1.35
Retrieved 100 of 76,532 protein–RNA pairs in 31.7 ms