Protein–RNA interactions for Protein: A0A140LHH9

Gm35339, Predicted gene, 35339, mousemouse

Predictions only

Length 1,649 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Gm35339A0A140LHH9 Tmeff1-202ENSMUST00000123476 1224 ntAPPRIS P1 TSL 1 (best) BASIC58.74■■■■■ 6.99
Gm35339A0A140LHH9 Mkrn1-202ENSMUST00000051671 1511 ntTSL 1 (best) BASIC58.73■■■■■ 6.99
Gm35339A0A140LHH9 Cdk2ap1-201ENSMUST00000031341 1315 ntAPPRIS P2 TSL 1 (best) BASIC58.66■■■■■ 6.98
Gm35339A0A140LHH9 1700016A09Rik-201ENSMUST00000192004 835 ntBASIC58.65■■■■■ 6.98
Gm35339A0A140LHH9 Gm45855-201ENSMUST00000212546 880 ntBASIC58.64■■■■■ 6.98
Gm35339A0A140LHH9 Cds2-203ENSMUST00000110158 1247 ntTSL 1 (best) BASIC58.62■■■■■ 6.97
Gm35339A0A140LHH9 Gm9397-201ENSMUST00000200125 605 ntBASIC58.56■■■■■ 6.97
Gm35339A0A140LHH9 Vsig8-201ENSMUST00000061835 1801 ntAPPRIS P1 TSL 1 (best) BASIC58.55■■■■■ 6.96
Gm35339A0A140LHH9 2810459M11Rik-201ENSMUST00000027429 1225 ntAPPRIS ALT2 TSL 1 (best) BASIC58.55■■■■■ 6.96
Gm35339A0A140LHH9 Nemp1-202ENSMUST00000118612 1522 ntTSL 1 (best) BASIC58.54■■■■■ 6.96
Gm35339A0A140LHH9 Mthfd2l-203ENSMUST00000202781 688 ntTSL 1 (best) BASIC58.45■■■■■ 6.95
Gm35339A0A140LHH9 1110008F13Rik-201ENSMUST00000029165 1045 ntAPPRIS P1 TSL 1 (best) BASIC58.42■■■■■ 6.94
Gm35339A0A140LHH9 Glt8d1-201ENSMUST00000022476 2018 ntAPPRIS P1 TSL 1 (best) BASIC58.32■■■■■ 6.93
Gm35339A0A140LHH9 Ppp1r14b-201ENSMUST00000070850 919 ntAPPRIS P1 TSL 1 (best) BASIC58.3■■■■■ 6.92
Gm35339A0A140LHH9 Ube2e2-205ENSMUST00000150727 1523 ntAPPRIS P1 TSL 1 (best) BASIC58.3■■■■■ 6.92
Gm35339A0A140LHH9 Qrich1-209ENSMUST00000194385 975 ntTSL 2 BASIC58.28■■■■■ 6.92
Gm35339A0A140LHH9 Hoxa13-201ENSMUST00000047993 1309 ntAPPRIS ALT2 TSL 5 BASIC58.28■■■■■ 6.92
Gm35339A0A140LHH9 Kcnmb4os2-201ENSMUST00000080943 1571 ntTSL 5 BASIC58.25■■■■■ 6.92
Gm35339A0A140LHH9 Dut-202ENSMUST00000082122 1020 ntTSL 1 (best) BASIC58.25■■■■■ 6.92
Gm35339A0A140LHH9 Gm42517-201ENSMUST00000197216 1850 ntAPPRIS P1 BASIC58.23■■■■■ 6.91
Gm35339A0A140LHH9 Aard-201ENSMUST00000090025 1348 ntAPPRIS P1 TSL 1 (best) BASIC58.22■■■■■ 6.91
Gm35339A0A140LHH9 Capns1-201ENSMUST00000001845 1600 ntAPPRIS P2 TSL 5 BASIC58.21■■■■■ 6.91
Gm35339A0A140LHH9 Pradc1-202ENSMUST00000113770 610 ntTSL 1 (best) BASIC58.2■■■■■ 6.91
Gm35339A0A140LHH9 Gng13-201ENSMUST00000115108 347 ntAPPRIS P1 TSL 1 (best) BASIC58.19■■■■■ 6.91
Gm35339A0A140LHH9 BC037032-205ENSMUST00000187080 508 ntTSL 5 BASIC58.19■■■■■ 6.91
Gm35339A0A140LHH9 Trp53rkb-202ENSMUST00000065753 1375 ntTSL 1 (best) BASIC58.18■■■■■ 6.9
Gm35339A0A140LHH9 Dedd-201ENSMUST00000064950 1618 ntAPPRIS P1 TSL 1 (best) BASIC58.13■■■■■ 6.9
Gm35339A0A140LHH9 Lrrc1-204ENSMUST00000183734 2113 ntTSL 1 (best) BASIC58.1■■■■■ 6.89
Gm35339A0A140LHH9 Gm20503-201ENSMUST00000174664 1294 ntAPPRIS P1 TSL 5 BASIC58.07■■■■■ 6.89
Gm35339A0A140LHH9 Mipep-204ENSMUST00000225043 1548 ntBASIC58.06■■■■■ 6.89
Gm35339A0A140LHH9 1810026B05Rik-202ENSMUST00000184554 782 ntTSL 3 BASIC57.99■■■■■ 6.87
Gm35339A0A140LHH9 Ube2q2-202ENSMUST00000121677 1680 ntAPPRIS ALT2 TSL 5 BASIC57.99■■■■■ 6.87
Gm35339A0A140LHH9 A530058N18Rik-207ENSMUST00000152254 1211 ntTSL 1 (best) BASIC57.98■■■■■ 6.87
Gm35339A0A140LHH9 Abhd17a-201ENSMUST00000003436 1468 ntAPPRIS P1 TSL 1 (best) BASIC57.98■■■■■ 6.87
Gm35339A0A140LHH9 Orai1-201ENSMUST00000051016 1482 ntAPPRIS P1 TSL 1 (best) BASIC57.98■■■■■ 6.87
Gm35339A0A140LHH9 A330023F24Rik-201ENSMUST00000181226 955 ntTSL 1 (best) BASIC57.97■■■■■ 6.87
Gm35339A0A140LHH9 Snx24-202ENSMUST00000165032 1880 ntAPPRIS P1 TSL 1 (best) BASIC57.96■■■■■ 6.87
Gm35339A0A140LHH9 Evx2-202ENSMUST00000173623 1428 ntAPPRIS P2 TSL 1 (best) BASIC57.95■■■■■ 6.87
Gm35339A0A140LHH9 Shf-201ENSMUST00000048635 1431 ntAPPRIS P2 TSL 1 (best) BASIC57.95■■■■■ 6.87
Gm35339A0A140LHH9 Crlf1-201ENSMUST00000008032 1644 ntAPPRIS P1 TSL 1 (best) BASIC57.94■■■■■ 6.87
Gm35339A0A140LHH9 C2cd4d-201ENSMUST00000169433 1321 ntAPPRIS P1 TSL 3 BASIC57.94■■■■■ 6.87
Gm35339A0A140LHH9 Spg7-201ENSMUST00000108868 845 ntTSL 2 BASIC57.9■■■■■ 6.86
Gm35339A0A140LHH9 Syt7-201ENSMUST00000073899 1605 ntAPPRIS P1 TSL 1 (best) BASIC57.89■■■■■ 6.86
Gm35339A0A140LHH9 Fbxo6-201ENSMUST00000030858 1346 ntAPPRIS P1 TSL 1 (best) BASIC57.86■■■■■ 6.85
Gm35339A0A140LHH9 March2-205ENSMUST00000173015 1418 ntTSL 3 BASIC57.86■■■■■ 6.85
Gm35339A0A140LHH9 Mxra7-202ENSMUST00000047715 757 ntAPPRIS ALT2 TSL 1 (best) BASIC57.86■■■■■ 6.85
Gm35339A0A140LHH9 C1qtnf5-201ENSMUST00000114815 1215 ntAPPRIS P1 TSL 1 (best) BASIC57.82■■■■■ 6.85
Gm35339A0A140LHH9 Crip2-201ENSMUST00000084882 1439 ntAPPRIS P1 TSL 1 (best) BASIC57.8■■■■■ 6.84
Gm35339A0A140LHH9 Cetn4-202ENSMUST00000075537 762 ntTSL 3 BASIC57.77■■■■■ 6.84
Gm35339A0A140LHH9 Gm5987-201ENSMUST00000196433 1151 ntBASIC57.73■■■■■ 6.83
Gm35339A0A140LHH9 Gm2018-201ENSMUST00000140754 478 ntTSL 2 BASIC57.72■■■■■ 6.83
Gm35339A0A140LHH9 Tsen34-203ENSMUST00000108629 1238 ntTSL 1 (best) BASIC57.69■■■■■ 6.83
Gm35339A0A140LHH9 Casp9-202ENSMUST00000097805 1498 ntTSL 1 (best) BASIC57.68■■■■■ 6.82
Gm35339A0A140LHH9 9230104M06Rik-201ENSMUST00000180971 1963 ntBASIC57.68■■■■■ 6.82
Gm35339A0A140LHH9 Gm24970-201ENSMUST00000175582 82 ntBASIC57.62■■■■■ 6.81
Gm35339A0A140LHH9 AY074887-201ENSMUST00000054018 769 ntAPPRIS P1 BASIC57.61■■■■■ 6.81
Gm35339A0A140LHH9 AC158592.1-201ENSMUST00000215560 1113 ntTSL 5 BASIC57.59■■■■■ 6.81
Gm35339A0A140LHH9 Cib1-201ENSMUST00000065163 1047 ntAPPRIS P1 TSL 1 (best) BASIC57.57■■■■■ 6.81
Gm35339A0A140LHH9 Gm29254-202ENSMUST00000189302 883 ntTSL 1 (best) BASIC57.55■■■■■ 6.8
Gm35339A0A140LHH9 Bcl7c-207ENSMUST00000207019 654 ntTSL 3 BASIC57.54■■■■■ 6.8
Gm35339A0A140LHH9 1810026B05Rik-206ENSMUST00000187421 519 ntTSL 3 BASIC57.54■■■■■ 6.8
Gm35339A0A140LHH9 Dapk3-209ENSMUST00000219850 1482 ntAPPRIS P1 TSL 1 (best) BASIC57.51■■■■■ 6.8
Gm35339A0A140LHH9 Dlx6os2-201ENSMUST00000178206 1354 ntBASIC57.51■■■■■ 6.8
Gm35339A0A140LHH9 Macrod2-205ENSMUST00000110063 845 ntTSL 5 BASIC57.5■■■■■ 6.8
Gm35339A0A140LHH9 Stard3nl-210ENSMUST00000222869 1030 ntTSL 5 BASIC57.46■■■■■ 6.79
Gm35339A0A140LHH9 Vsig8-202ENSMUST00000177086 1519 ntTSL 1 (best) BASIC57.43■■■■■ 6.78
Gm35339A0A140LHH9 Zfyve21-201ENSMUST00000021714 1308 ntAPPRIS P2 TSL 1 (best) BASIC57.31■■■■■ 6.76
Gm35339A0A140LHH9 Dhrs13-203ENSMUST00000122342 1791 ntTSL 1 (best) BASIC57.3■■■■■ 6.76
Gm35339A0A140LHH9 Gm8503-201ENSMUST00000118131 455 ntBASIC57.25■■■■■ 6.75
Gm35339A0A140LHH9 Ube2f-202ENSMUST00000171112 1547 ntAPPRIS P1 TSL 1 (best) BASIC57.2■■■■■ 6.75
Gm35339A0A140LHH9 Scx-201ENSMUST00000043089 1136 ntAPPRIS P1 TSL 1 (best) BASIC57.15■■■■■ 6.74
Gm35339A0A140LHH9 4930542C12Rik-201ENSMUST00000171096 1203 ntBASIC57.05■■■■■ 6.72
Gm35339A0A140LHH9 Gm12523-201ENSMUST00000148844 599 ntTSL 5 BASIC57.03■■■■■ 6.72
Gm35339A0A140LHH9 E330040D14Rik-201ENSMUST00000192299 1374 ntBASIC57.03■■■■■ 6.72
Gm35339A0A140LHH9 Gm17110-201ENSMUST00000171248 735 ntTSL 3 BASIC56.97■■■■■ 6.71
Gm35339A0A140LHH9 Ubl4a-207ENSMUST00000178691 1038 ntAPPRIS P1 TSL 2 BASIC56.96■■■■■ 6.71
Gm35339A0A140LHH9 Gm9939-201ENSMUST00000067161 1154 ntBASIC56.96■■■■■ 6.71
Gm35339A0A140LHH9 Tnfsf12-202ENSMUST00000181810 1435 ntAPPRIS P1 TSL 1 (best) BASIC56.96■■■■■ 6.71
Gm35339A0A140LHH9 Stradb-202ENSMUST00000114296 1348 ntTSL 1 (best) BASIC56.9■■■■■ 6.7
Gm35339A0A140LHH9 Fcho2-203ENSMUST00000109403 1523 ntTSL 5 BASIC56.89■■■■■ 6.7
Gm35339A0A140LHH9 Gm12100-201ENSMUST00000150255 1933 ntTSL 1 (best) BASIC56.83■■■■■ 6.69
Gm35339A0A140LHH9 Macrod1-201ENSMUST00000040261 1274 ntAPPRIS P1 TSL 1 (best) BASIC56.82■■■■■ 6.69
Gm35339A0A140LHH9 Junos-204ENSMUST00000128094 830 ntTSL 1 (best) BASIC56.8■■■■■ 6.68
Gm35339A0A140LHH9 Sowahd-201ENSMUST00000060057 1574 ntAPPRIS P1 BASIC56.8■■■■■ 6.68
Gm35339A0A140LHH9 Tmem243-201ENSMUST00000115365 1040 ntAPPRIS P1 TSL 2 BASIC56.78■■■■■ 6.68
Gm35339A0A140LHH9 Rnd2-201ENSMUST00000001347 1394 ntAPPRIS P1 TSL 1 (best) BASIC56.77■■■■■ 6.68
Gm35339A0A140LHH9 Naa20-201ENSMUST00000002805 1172 ntTSL 1 (best) BASIC56.74■■■■■ 6.67
Gm35339A0A140LHH9 Bok-201ENSMUST00000027499 1468 ntAPPRIS P1 TSL 1 (best) BASIC56.72■■■■■ 6.67
Gm35339A0A140LHH9 Ccm2l-201ENSMUST00000109800 2158 ntAPPRIS P1 TSL 5 BASIC56.72■■■■■ 6.67
Gm35339A0A140LHH9 Eif5a-201ENSMUST00000043419 1437 ntAPPRIS P1 TSL 1 (best) BASIC56.7■■■■■ 6.67
Gm35339A0A140LHH9 Uba52-207ENSMUST00000140679 697 ntAPPRIS P1 TSL 2 BASIC56.68■■■■■ 6.66
Gm35339A0A140LHH9 A530058N18Rik-204ENSMUST00000141209 709 ntTSL 5 BASIC56.66■■■■■ 6.66
Gm35339A0A140LHH9 Lactb-202ENSMUST00000215172 1806 ntTSL 1 (best) BASIC56.65■■■■■ 6.66
Gm35339A0A140LHH9 Atp1b3-201ENSMUST00000034983 1994 ntAPPRIS P1 TSL 1 (best) BASIC56.63■■■■■ 6.66
Gm35339A0A140LHH9 Gm527-201ENSMUST00000058135 1468 ntAPPRIS P1 TSL 1 (best) BASIC56.61■■■■■ 6.65
Gm35339A0A140LHH9 Hrh3-208ENSMUST00000171736 906 ntTSL 5 BASIC56.61■■■■■ 6.65
Gm35339A0A140LHH9 Bok-205ENSMUST00000201863 883 ntAPPRIS P1 TSL 5 BASIC56.56■■■■■ 6.64
Gm35339A0A140LHH9 2310050C09Rik-201ENSMUST00000163439 1078 ntAPPRIS P1 TSL 2 BASIC56.55■■■■■ 6.64
Gm35339A0A140LHH9 Gm6821-201ENSMUST00000107540 542 ntBASIC56.54■■■■■ 6.64
Gm35339A0A140LHH9 Emx1-201ENSMUST00000045942 1561 ntAPPRIS P1 TSL 1 (best) BASIC56.5■■■■■ 6.64
Retrieved 100 of 76,532 protein–RNA pairs in 41 ms