Protein–RNA interactions for Protein: A0A0B4J1N1

C920008G01Rik, RIKEN cDNA C920008G01 gene (Fragment), mousemouse

Predictions only

Length 112 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
C920008G01RikA0A0B4J1N1 Traf4-201ENSMUST00000017530 2078 ntAPPRIS P1 TSL 1 (best) BASIC17.86■□□□□ 0.45
C920008G01RikA0A0B4J1N1 Tpst1-201ENSMUST00000040721 2050 ntAPPRIS P1 TSL 1 (best) BASIC17.86■□□□□ 0.45
C920008G01RikA0A0B4J1N1 Cldnd1-201ENSMUST00000023426 2147 ntAPPRIS P1 TSL 1 (best) BASIC17.86■□□□□ 0.45
C920008G01RikA0A0B4J1N1 Ryk-201ENSMUST00000035142 2852 ntAPPRIS ALT2 TSL 1 (best) BASIC17.85■□□□□ 0.45
C920008G01RikA0A0B4J1N1 Ppp1r3e-202ENSMUST00000177403 1957 ntAPPRIS P1 TSL 5 BASIC17.83■□□□□ 0.44
C920008G01RikA0A0B4J1N1 Zfp91-201ENSMUST00000038627 5531 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
C920008G01RikA0A0B4J1N1 Lemd2-201ENSMUST00000055117 2595 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
C920008G01RikA0A0B4J1N1 Kdm2a-203ENSMUST00000116571 2413 ntTSL 1 (best) BASIC17.81■□□□□ 0.44
C920008G01RikA0A0B4J1N1 St6galnac6-204ENSMUST00000095045 2536 ntAPPRIS ALT1 TSL 1 (best) BASIC17.79■□□□□ 0.44
C920008G01RikA0A0B4J1N1 Ssx2ip-202ENSMUST00000106149 2416 ntAPPRIS ALT2 TSL 1 (best) BASIC17.79■□□□□ 0.44
C920008G01RikA0A0B4J1N1 Sh3glb2-214ENSMUST00000163668 1733 ntTSL 5 BASIC17.78■□□□□ 0.44
C920008G01RikA0A0B4J1N1 Lactb-202ENSMUST00000215172 1806 ntTSL 1 (best) BASIC17.78■□□□□ 0.44
C920008G01RikA0A0B4J1N1 Fam168b-201ENSMUST00000047534 5030 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
C920008G01RikA0A0B4J1N1 Tpm1-216ENSMUST00000113707 1898 ntTSL 1 (best) BASIC17.78■□□□□ 0.44
C920008G01RikA0A0B4J1N1 Epb41l4b-203ENSMUST00000095076 6746 ntAPPRIS ALT2 TSL 5 BASIC17.77■□□□□ 0.44
C920008G01RikA0A0B4J1N1 Tmem59-201ENSMUST00000030361 1775 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
C920008G01RikA0A0B4J1N1 Rbfox2-201ENSMUST00000048145 1720 ntTSL 1 (best) BASIC17.75■□□□□ 0.43
C920008G01RikA0A0B4J1N1 Gm960-202ENSMUST00000177696 2262 ntAPPRIS P2 TSL 5 BASIC17.74■□□□□ 0.43
C920008G01RikA0A0B4J1N1 Gnai2-202ENSMUST00000192615 1777 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
C920008G01RikA0A0B4J1N1 Gm43445-201ENSMUST00000198564 2091 ntBASIC17.73■□□□□ 0.43
C920008G01RikA0A0B4J1N1 Arl2bp-201ENSMUST00000034228 2063 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
C920008G01RikA0A0B4J1N1 Ctbp1-201ENSMUST00000079746 2279 ntAPPRIS P3 TSL 1 (best) BASIC17.73■□□□□ 0.43
C920008G01RikA0A0B4J1N1 Pfn2-202ENSMUST00000119344 1879 ntTSL 1 (best) BASIC17.72■□□□□ 0.43
C920008G01RikA0A0B4J1N1 Zfp787-201ENSMUST00000094870 1897 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
C920008G01RikA0A0B4J1N1 Ric1-206ENSMUST00000162184 2157 ntTSL 1 (best) BASIC17.7■□□□□ 0.42
C920008G01RikA0A0B4J1N1 Nrgn-201ENSMUST00000065668 1453 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
C920008G01RikA0A0B4J1N1 Ildr2-207ENSMUST00000195557 1947 ntAPPRIS ALT2 TSL 1 (best) BASIC17.68■□□□□ 0.42
C920008G01RikA0A0B4J1N1 Arhgap22-201ENSMUST00000111955 2148 ntTSL 1 (best) BASIC17.68■□□□□ 0.42
C920008G01RikA0A0B4J1N1 Reep6-202ENSMUST00000105354 2208 ntAPPRIS P3 TSL 1 (best) BASIC17.67■□□□□ 0.42
C920008G01RikA0A0B4J1N1 Reep6-205ENSMUST00000105358 2208 ntTSL 1 (best) BASIC17.67■□□□□ 0.42
C920008G01RikA0A0B4J1N1 Galnt10-202ENSMUST00000108846 1745 ntTSL 1 (best) BASIC17.65■□□□□ 0.42
C920008G01RikA0A0B4J1N1 Trp53i13-201ENSMUST00000060417 1463 ntAPPRIS P2 TSL 1 (best) BASIC17.64■□□□□ 0.41
C920008G01RikA0A0B4J1N1 Fam120a-201ENSMUST00000060805 5105 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
C920008G01RikA0A0B4J1N1 Pwwp2a-202ENSMUST00000094294 1814 ntTSL 5 BASIC17.64■□□□□ 0.41
C920008G01RikA0A0B4J1N1 Amer2-203ENSMUST00000225247 2662 ntBASIC17.64■□□□□ 0.41
C920008G01RikA0A0B4J1N1 Smurf1-202ENSMUST00000100461 2725 ntAPPRIS ALT1 TSL 1 (best) BASIC17.64■□□□□ 0.41
C920008G01RikA0A0B4J1N1 Heca-201ENSMUST00000037879 5098 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
C920008G01RikA0A0B4J1N1 Gpr27-201ENSMUST00000101122 2388 ntAPPRIS P1 BASIC17.64■□□□□ 0.41
C920008G01RikA0A0B4J1N1 Ttc19-202ENSMUST00000101075 2193 ntAPPRIS ALT2 TSL 1 (best) BASIC17.63■□□□□ 0.41
C920008G01RikA0A0B4J1N1 Bin1-202ENSMUST00000091967 2118 ntAPPRIS ALT2 TSL 1 (best) BASIC17.63■□□□□ 0.41
C920008G01RikA0A0B4J1N1 Zfp131-207ENSMUST00000224946 1783 ntBASIC17.63■□□□□ 0.41
C920008G01RikA0A0B4J1N1 Maz-201ENSMUST00000032916 2347 ntTSL 1 (best) BASIC17.63■□□□□ 0.41
C920008G01RikA0A0B4J1N1 Ildr2-205ENSMUST00000193860 2320 ntTSL 1 (best) BASIC17.62■□□□□ 0.41
C920008G01RikA0A0B4J1N1 Irak1-207ENSMUST00000114360 2441 ntAPPRIS ALT2 TSL 1 (best) BASIC17.6■□□□□ 0.41
C920008G01RikA0A0B4J1N1 Gm45716-202ENSMUST00000134929 2031 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
C920008G01RikA0A0B4J1N1 Lactb-201ENSMUST00000034929 2031 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
C920008G01RikA0A0B4J1N1 Adgrb1-203ENSMUST00000185682 2744 ntTSL 1 (best) BASIC17.58■□□□□ 0.4
C920008G01RikA0A0B4J1N1 Rab40c-209ENSMUST00000179998 2456 ntAPPRIS P1 TSL 5 BASIC17.57■□□□□ 0.4
C920008G01RikA0A0B4J1N1 Ebag9-203ENSMUST00000227691 1945 ntAPPRIS P1 BASIC17.57■□□□□ 0.4
C920008G01RikA0A0B4J1N1 Ywhah-201ENSMUST00000019109 1764 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
C920008G01RikA0A0B4J1N1 Rcor2-201ENSMUST00000066646 2801 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
C920008G01RikA0A0B4J1N1 Prr3-201ENSMUST00000055454 2727 ntAPPRIS P3 TSL 1 (best) BASIC17.54■□□□□ 0.4
C920008G01RikA0A0B4J1N1 Rnf220-212ENSMUST00000221654 1949 ntTSL 1 (best) BASIC17.53■□□□□ 0.4
C920008G01RikA0A0B4J1N1 Gsk3a-202ENSMUST00000108411 2248 ntAPPRIS ALT2 TSL 5 BASIC17.51■□□□□ 0.39
C920008G01RikA0A0B4J1N1 Dennd5a-202ENSMUST00000106722 4862 ntTSL 1 (best) BASIC17.51■□□□□ 0.39
C920008G01RikA0A0B4J1N1 2410017I17Rik-202ENSMUST00000090537 2053 ntTSL 2 BASIC17.51■□□□□ 0.39
C920008G01RikA0A0B4J1N1 Raly-201ENSMUST00000029120 1802 ntAPPRIS ALT2 TSL 5 BASIC17.5■□□□□ 0.39
C920008G01RikA0A0B4J1N1 Zfp513-202ENSMUST00000114590 2228 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
C920008G01RikA0A0B4J1N1 Hdgf-201ENSMUST00000005017 2245 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
C920008G01RikA0A0B4J1N1 Mypop-203ENSMUST00000131087 1951 ntAPPRIS P1 TSL 5 BASIC17.49■□□□□ 0.39
C920008G01RikA0A0B4J1N1 Gm960-204ENSMUST00000225896 2202 ntAPPRIS ALT2 BASIC17.49■□□□□ 0.39
C920008G01RikA0A0B4J1N1 Kansl2-201ENSMUST00000023727 2311 ntAPPRIS ALT2 TSL 5 BASIC17.49■□□□□ 0.39
C920008G01RikA0A0B4J1N1 Clk2-203ENSMUST00000121931 2112 ntAPPRIS ALT1 TSL 5 BASIC17.48■□□□□ 0.39
C920008G01RikA0A0B4J1N1 Mpp6-203ENSMUST00000166318 2222 ntTSL 1 (best) BASIC17.47■□□□□ 0.39
C920008G01RikA0A0B4J1N1 Drap1-201ENSMUST00000025853 992 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
C920008G01RikA0A0B4J1N1 Smad7-202ENSMUST00000168918 1882 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
C920008G01RikA0A0B4J1N1 Raly-204ENSMUST00000116389 1759 ntAPPRIS ALT2 TSL 5 BASIC17.46■□□□□ 0.39
C920008G01RikA0A0B4J1N1 Rgs7-206ENSMUST00000194555 2431 ntAPPRIS ALT2 TSL 1 (best) BASIC17.46■□□□□ 0.38
C920008G01RikA0A0B4J1N1 Klhl25-205ENSMUST00000206019 2299 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
C920008G01RikA0A0B4J1N1 Fezf2-202ENSMUST00000224023 1917 ntBASIC17.44■□□□□ 0.38
C920008G01RikA0A0B4J1N1 Pon2-201ENSMUST00000057792 2409 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
C920008G01RikA0A0B4J1N1 Pfdn2-202ENSMUST00000135941 1735 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
C920008G01RikA0A0B4J1N1 Scrt2-201ENSMUST00000064061 3395 ntAPPRIS P1 TSL 5 BASIC17.43■□□□□ 0.38
C920008G01RikA0A0B4J1N1 Ring1-201ENSMUST00000025183 2034 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
C920008G01RikA0A0B4J1N1 Zswim5-201ENSMUST00000044823 5582 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
C920008G01RikA0A0B4J1N1 Nectin3-203ENSMUST00000096052 1746 ntAPPRIS ALT2 TSL 1 (best) BASIC17.41■□□□□ 0.38
C920008G01RikA0A0B4J1N1 Igfbp3-202ENSMUST00000135887 1709 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
C920008G01RikA0A0B4J1N1 Tsc22d1-204ENSMUST00000110888 4999 ntTSL 1 (best) BASIC17.4■□□□□ 0.38
C920008G01RikA0A0B4J1N1 Fcho2-203ENSMUST00000109403 1523 ntTSL 5 BASIC17.4■□□□□ 0.38
C920008G01RikA0A0B4J1N1 Ctnnd2-201ENSMUST00000081728 5944 ntAPPRIS P2 TSL 1 (best) BASIC17.4■□□□□ 0.38
C920008G01RikA0A0B4J1N1 Rnf19b-201ENSMUST00000030584 2414 ntAPPRIS ALT2 TSL 5 BASIC17.39■□□□□ 0.37
C920008G01RikA0A0B4J1N1 Rexo2-201ENSMUST00000034524 1077 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
C920008G01RikA0A0B4J1N1 Znrf2-201ENSMUST00000079869 5886 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
C920008G01RikA0A0B4J1N1 Mast2-203ENSMUST00000106485 5705 ntAPPRIS ALT2 TSL 1 (best) BASIC17.39■□□□□ 0.37
C920008G01RikA0A0B4J1N1 Mast2-204ENSMUST00000106486 5723 ntAPPRIS P4 TSL 1 (best) BASIC17.39■□□□□ 0.37
C920008G01RikA0A0B4J1N1 Clk2-202ENSMUST00000121212 2154 ntAPPRIS P3 TSL 1 (best) BASIC17.39■□□□□ 0.37
C920008G01RikA0A0B4J1N1 Arhgdia-201ENSMUST00000067936 2150 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
C920008G01RikA0A0B4J1N1 4921531C22Rik-201ENSMUST00000150145 1905 ntTSL 1 (best) BASIC17.38■□□□□ 0.37
C920008G01RikA0A0B4J1N1 Phf10-201ENSMUST00000024657 1663 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
C920008G01RikA0A0B4J1N1 AC153890.1-201ENSMUST00000220021 2469 ntBASIC17.38■□□□□ 0.37
C920008G01RikA0A0B4J1N1 Tspan3-201ENSMUST00000034876 1716 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
C920008G01RikA0A0B4J1N1 Gltp-201ENSMUST00000012028 1762 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
C920008G01RikA0A0B4J1N1 Marveld2-202ENSMUST00000163163 2187 ntTSL 1 (best) BASIC17.36■□□□□ 0.37
C920008G01RikA0A0B4J1N1 Casp9-202ENSMUST00000097805 1498 ntTSL 1 (best) BASIC17.36■□□□□ 0.37
C920008G01RikA0A0B4J1N1 Gm27325-201ENSMUST00000175467 74 ntBASIC17.35■□□□□ 0.37
C920008G01RikA0A0B4J1N1 Gm20732-201ENSMUST00000175699 686 ntTSL 3 BASIC17.35■□□□□ 0.37
C920008G01RikA0A0B4J1N1 Vps37d-201ENSMUST00000067935 1544 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
C920008G01RikA0A0B4J1N1 Efna3-201ENSMUST00000029673 2363 ntAPPRIS P2 TSL 1 (best) BASIC17.34■□□□□ 0.37
C920008G01RikA0A0B4J1N1 Kcna7-201ENSMUST00000107774 2182 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.37
C920008G01RikA0A0B4J1N1 Bzw1-202ENSMUST00000186949 1492 ntTSL 5 BASIC17.33■□□□□ 0.37
Retrieved 100 of 76,532 protein–RNA pairs in 15.2 ms