Protein–RNA interactions for Protein: A0A075B6A4

Trav12d-3, T cell receptor alpha variable 12D-3 (Fragment), mousemouse

Predictions only

Length 115 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav12d-3A0A075B6A4 Tmem59-201ENSMUST00000030361 1775 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.73
Trav12d-3A0A075B6A4 Bin1-202ENSMUST00000091967 2118 ntAPPRIS ALT2 TSL 1 (best) BASIC19.63■□□□□ 0.73
Trav12d-3A0A075B6A4 Rbfox2-201ENSMUST00000048145 1720 ntTSL 1 (best) BASIC19.62■□□□□ 0.73
Trav12d-3A0A075B6A4 Zxdb-201ENSMUST00000101388 5619 ntAPPRIS P1 BASIC19.62■□□□□ 0.73
Trav12d-3A0A075B6A4 Lactb-202ENSMUST00000215172 1806 ntTSL 1 (best) BASIC19.62■□□□□ 0.73
Trav12d-3A0A075B6A4 Pfn2-202ENSMUST00000119344 1879 ntTSL 1 (best) BASIC19.61■□□□□ 0.73
Trav12d-3A0A075B6A4 Gpr27-201ENSMUST00000101122 2388 ntAPPRIS P1 BASIC19.61■□□□□ 0.73
Trav12d-3A0A075B6A4 Zfp513-202ENSMUST00000114590 2228 ntAPPRIS P1 TSL 1 (best) BASIC19.58■□□□□ 0.73
Trav12d-3A0A075B6A4 Ric1-206ENSMUST00000162184 2157 ntTSL 1 (best) BASIC19.58■□□□□ 0.72
Trav12d-3A0A075B6A4 Irak1-207ENSMUST00000114360 2441 ntAPPRIS ALT2 TSL 1 (best) BASIC19.57■□□□□ 0.72
Trav12d-3A0A075B6A4 Galnt10-202ENSMUST00000108846 1745 ntTSL 1 (best) BASIC19.56■□□□□ 0.72
Trav12d-3A0A075B6A4 Ildr2-207ENSMUST00000195557 1947 ntAPPRIS ALT2 TSL 1 (best) BASIC19.56■□□□□ 0.72
Trav12d-3A0A075B6A4 Ttc19-202ENSMUST00000101075 2193 ntAPPRIS ALT2 TSL 1 (best) BASIC19.54■□□□□ 0.72
Trav12d-3A0A075B6A4 Gm23366-201ENSMUST00000175022 89 ntBASIC19.52■□□□□ 0.72
Trav12d-3A0A075B6A4 Tusc1-201ENSMUST00000066774 1374 ntAPPRIS P1 BASIC19.52■□□□□ 0.72
Trav12d-3A0A075B6A4 Gnai2-202ENSMUST00000192615 1777 ntAPPRIS P1 TSL 1 (best) BASIC19.52■□□□□ 0.71
Trav12d-3A0A075B6A4 Amer2-203ENSMUST00000225247 2662 ntBASIC19.51■□□□□ 0.71
Trav12d-3A0A075B6A4 Smurf1-202ENSMUST00000100461 2725 ntAPPRIS ALT1 TSL 1 (best) BASIC19.5■□□□□ 0.71
Trav12d-3A0A075B6A4 Gm960-204ENSMUST00000225896 2202 ntAPPRIS ALT2 BASIC19.5■□□□□ 0.71
Trav12d-3A0A075B6A4 Sh3glb2-214ENSMUST00000163668 1733 ntTSL 5 BASIC19.5■□□□□ 0.71
Trav12d-3A0A075B6A4 Ildr2-205ENSMUST00000193860 2320 ntTSL 1 (best) BASIC19.5■□□□□ 0.71
Trav12d-3A0A075B6A4 Gatad1-202ENSMUST00000119783 1278 ntAPPRIS ALT2 TSL 1 (best) BASIC19.49■□□□□ 0.71
Trav12d-3A0A075B6A4 Adgrb1-203ENSMUST00000185682 2744 ntTSL 1 (best) BASIC19.49■□□□□ 0.71
Trav12d-3A0A075B6A4 Pwwp2a-202ENSMUST00000094294 1814 ntTSL 5 BASIC19.48■□□□□ 0.71
Trav12d-3A0A075B6A4 Ywhah-201ENSMUST00000019109 1764 ntAPPRIS P1 TSL 1 (best) BASIC19.47■□□□□ 0.71
Trav12d-3A0A075B6A4 Lactb-201ENSMUST00000034929 2031 ntAPPRIS P1 TSL 1 (best) BASIC19.46■□□□□ 0.71
Trav12d-3A0A075B6A4 Gm45716-202ENSMUST00000134929 2031 ntAPPRIS P1 TSL 1 (best) BASIC19.46■□□□□ 0.71
Trav12d-3A0A075B6A4 Rnf220-212ENSMUST00000221654 1949 ntTSL 1 (best) BASIC19.45■□□□□ 0.7
Trav12d-3A0A075B6A4 Ebag9-203ENSMUST00000227691 1945 ntAPPRIS P1 BASIC19.45■□□□□ 0.7
Trav12d-3A0A075B6A4 Nrgn-201ENSMUST00000065668 1453 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
Trav12d-3A0A075B6A4 Igfbp3-202ENSMUST00000135887 1709 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
Trav12d-3A0A075B6A4 Zfp131-207ENSMUST00000224946 1783 ntBASIC19.42■□□□□ 0.7
Trav12d-3A0A075B6A4 Rab40c-209ENSMUST00000179998 2456 ntAPPRIS P1 TSL 5 BASIC19.42■□□□□ 0.7
Trav12d-3A0A075B6A4 Trp53i13-201ENSMUST00000060417 1463 ntAPPRIS P2 TSL 1 (best) BASIC19.41■□□□□ 0.7
Trav12d-3A0A075B6A4 Gsk3a-202ENSMUST00000108411 2248 ntAPPRIS ALT2 TSL 5 BASIC19.41■□□□□ 0.7
Trav12d-3A0A075B6A4 2410017I17Rik-202ENSMUST00000090537 2053 ntTSL 2 BASIC19.4■□□□□ 0.7
Trav12d-3A0A075B6A4 Prr3-201ENSMUST00000055454 2727 ntAPPRIS P3 TSL 1 (best) BASIC19.4■□□□□ 0.7
Trav12d-3A0A075B6A4 Hdgf-201ENSMUST00000005017 2245 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
Trav12d-3A0A075B6A4 Kansl2-201ENSMUST00000023727 2311 ntAPPRIS ALT2 TSL 5 BASIC19.4■□□□□ 0.7
Trav12d-3A0A075B6A4 Pfdn2-202ENSMUST00000135941 1735 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.7
Trav12d-3A0A075B6A4 Raly-201ENSMUST00000029120 1802 ntAPPRIS ALT2 TSL 5 BASIC19.39■□□□□ 0.7
Trav12d-3A0A075B6A4 Fezf2-202ENSMUST00000224023 1917 ntBASIC19.39■□□□□ 0.7
Trav12d-3A0A075B6A4 Mypop-203ENSMUST00000131087 1951 ntAPPRIS P1 TSL 5 BASIC19.39■□□□□ 0.69
Trav12d-3A0A075B6A4 Mpp6-203ENSMUST00000166318 2222 ntTSL 1 (best) BASIC19.38■□□□□ 0.69
Trav12d-3A0A075B6A4 Arhgdia-201ENSMUST00000067936 2150 ntAPPRIS P1 TSL 1 (best) BASIC19.38■□□□□ 0.69
Trav12d-3A0A075B6A4 Clk2-203ENSMUST00000121931 2112 ntAPPRIS ALT1 TSL 5 BASIC19.37■□□□□ 0.69
Trav12d-3A0A075B6A4 Smad7-202ENSMUST00000168918 1882 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
Trav12d-3A0A075B6A4 Arhgdig-201ENSMUST00000025019 1032 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
Trav12d-3A0A075B6A4 Clk2-202ENSMUST00000121212 2154 ntAPPRIS P3 TSL 1 (best) BASIC19.37■□□□□ 0.69
Trav12d-3A0A075B6A4 Rcor2-201ENSMUST00000066646 2801 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
Trav12d-3A0A075B6A4 Rgs7-206ENSMUST00000194555 2431 ntAPPRIS ALT2 TSL 1 (best) BASIC19.34■□□□□ 0.69
Trav12d-3A0A075B6A4 Rnf19b-201ENSMUST00000030584 2414 ntAPPRIS ALT2 TSL 5 BASIC19.34■□□□□ 0.69
Trav12d-3A0A075B6A4 Klhl25-205ENSMUST00000206019 2299 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
Trav12d-3A0A075B6A4 Pon2-201ENSMUST00000057792 2409 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.68
Trav12d-3A0A075B6A4 Fcho2-203ENSMUST00000109403 1523 ntTSL 5 BASIC19.32■□□□□ 0.68
Trav12d-3A0A075B6A4 Efna3-201ENSMUST00000029673 2363 ntAPPRIS P2 TSL 1 (best) BASIC19.32■□□□□ 0.68
Trav12d-3A0A075B6A4 Raly-204ENSMUST00000116389 1759 ntAPPRIS ALT2 TSL 5 BASIC19.28■□□□□ 0.68
Trav12d-3A0A075B6A4 Marveld2-202ENSMUST00000163163 2187 ntTSL 1 (best) BASIC19.27■□□□□ 0.68
Trav12d-3A0A075B6A4 Dlg1-203ENSMUST00000100001 4711 ntAPPRIS ALT2 TSL 5 BASIC19.26■□□□□ 0.67
Trav12d-3A0A075B6A4 4921531C22Rik-201ENSMUST00000150145 1905 ntTSL 1 (best) BASIC19.25■□□□□ 0.67
Trav12d-3A0A075B6A4 Grb2-202ENSMUST00000106495 2041 ntTSL 5 BASIC19.23■□□□□ 0.67
Trav12d-3A0A075B6A4 AC153890.1-201ENSMUST00000220021 2469 ntBASIC19.23■□□□□ 0.67
Trav12d-3A0A075B6A4 Kcna7-201ENSMUST00000107774 2182 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
Trav12d-3A0A075B6A4 Nectin3-203ENSMUST00000096052 1746 ntAPPRIS ALT2 TSL 1 (best) BASIC19.22■□□□□ 0.67
Trav12d-3A0A075B6A4 Ring1-201ENSMUST00000025183 2034 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
Trav12d-3A0A075B6A4 Panx2-202ENSMUST00000161372 2314 ntTSL 1 (best) BASIC19.22■□□□□ 0.67
Trav12d-3A0A075B6A4 Ubp1-203ENSMUST00000116492 2111 ntAPPRIS ALT1 TSL 1 (best) BASIC19.21■□□□□ 0.67
Trav12d-3A0A075B6A4 Fam220a-206ENSMUST00000196487 2278 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
Trav12d-3A0A075B6A4 Gpr12-201ENSMUST00000036211 2219 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
Trav12d-3A0A075B6A4 Arx-202ENSMUST00000113947 2454 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
Trav12d-3A0A075B6A4 Phf10-201ENSMUST00000024657 1663 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
Trav12d-3A0A075B6A4 Casp9-202ENSMUST00000097805 1498 ntTSL 1 (best) BASIC19.18■□□□□ 0.66
Trav12d-3A0A075B6A4 Maz-204ENSMUST00000206254 2282 ntTSL 5 BASIC19.18■□□□□ 0.66
Trav12d-3A0A075B6A4 Ier5l-201ENSMUST00000065134 2683 ntAPPRIS P1 BASIC19.17■□□□□ 0.66
Trav12d-3A0A075B6A4 Gltp-201ENSMUST00000012028 1762 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
Trav12d-3A0A075B6A4 Irx4-201ENSMUST00000022095 2589 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
Trav12d-3A0A075B6A4 Atp5a1-202ENSMUST00000114748 2674 ntTSL 1 (best) BASIC19.16■□□□□ 0.66
Trav12d-3A0A075B6A4 Tspan3-201ENSMUST00000034876 1716 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
Trav12d-3A0A075B6A4 Rcan1-202ENSMUST00000060005 2324 ntTSL 1 (best) BASIC19.15■□□□□ 0.66
Trav12d-3A0A075B6A4 Neurog2-201ENSMUST00000029587 2227 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
Trav12d-3A0A075B6A4 Hoxc13-201ENSMUST00000001700 2461 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.66
Trav12d-3A0A075B6A4 Fam220a-205ENSMUST00000169329 2331 ntAPPRIS P1 TSL 1 (best) BASIC19.12■□□□□ 0.65
Trav12d-3A0A075B6A4 Suds3-202ENSMUST00000166397 1694 ntAPPRIS ALT2 TSL 1 (best) BASIC19.11■□□□□ 0.65
Trav12d-3A0A075B6A4 Rhobtb3-202ENSMUST00000109606 1676 ntTSL 1 (best) BASIC19.1■□□□□ 0.65
Trav12d-3A0A075B6A4 E2f1-201ENSMUST00000000894 2755 ntAPPRIS ALT2 TSL 1 (best) BASIC19.1■□□□□ 0.65
Trav12d-3A0A075B6A4 Bzw1-202ENSMUST00000186949 1492 ntTSL 5 BASIC19.09■□□□□ 0.65
Trav12d-3A0A075B6A4 Cited2-203ENSMUST00000219558 2411 ntAPPRIS P1 BASIC19.09■□□□□ 0.65
Trav12d-3A0A075B6A4 Terf2-201ENSMUST00000068388 1915 ntAPPRIS ALT2 TSL 1 (best) BASIC19.09■□□□□ 0.65
Trav12d-3A0A075B6A4 Dtnb-203ENSMUST00000164578 2355 ntTSL 1 (best) BASIC19.08■□□□□ 0.65
Trav12d-3A0A075B6A4 E2f6-201ENSMUST00000020908 2418 ntAPPRIS P1 TSL 1 (best) BASIC19.08■□□□□ 0.64
Trav12d-3A0A075B6A4 Snta1-202ENSMUST00000109728 2131 ntAPPRIS P2 TSL 1 (best) BASIC19.08■□□□□ 0.64
Trav12d-3A0A075B6A4 Snta1-201ENSMUST00000028991 2125 ntAPPRIS ALT2 TSL 1 (best) BASIC19.08■□□□□ 0.64
Trav12d-3A0A075B6A4 Cetn4-201ENSMUST00000071400 1808 ntTSL 5 BASIC19.05■□□□□ 0.64
Trav12d-3A0A075B6A4 Nr2f6-201ENSMUST00000002466 2218 ntAPPRIS P1 TSL 1 (best) BASIC19.04■□□□□ 0.64
Trav12d-3A0A075B6A4 Agap3-201ENSMUST00000024123 3207 ntAPPRIS P1 TSL 1 (best) BASIC19.04■□□□□ 0.64
Trav12d-3A0A075B6A4 Gas2l1-201ENSMUST00000037146 2686 ntAPPRIS ALT2 TSL 1 (best) BASIC19.03■□□□□ 0.64
Trav12d-3A0A075B6A4 Agpat2-201ENSMUST00000028286 1489 ntAPPRIS P1 TSL 1 (best) BASIC19.03■□□□□ 0.64
Trav12d-3A0A075B6A4 Peg12-201ENSMUST00000094339 2640 ntAPPRIS P1 BASIC19.02■□□□□ 0.64
Trav12d-3A0A075B6A4 Ica1-201ENSMUST00000038403 2075 ntAPPRIS P2 TSL 1 (best) BASIC19.02■□□□□ 0.63
Trav12d-3A0A075B6A4 Rnf149-201ENSMUST00000062525 2492 ntAPPRIS P1 TSL 1 (best) BASIC19.01■□□□□ 0.63
Retrieved 100 of 76,532 protein–RNA pairs in 8.4 ms