Protein–RNA interactions for Protein: A0A075B633

Trav8n-2, T cell receptor alpha variable 8n-2 (Fragment), mousemouse

Predictions only

Length 112 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav8n-2A0A075B633 Gm527-203ENSMUST00000220993 1090 ntTSL 5 BASIC24.65■■□□□ 1.54
Trav8n-2A0A075B633 Casp9-202ENSMUST00000097805 1498 ntTSL 1 (best) BASIC24.64■■□□□ 1.53
Trav8n-2A0A075B633 9230104M06Rik-201ENSMUST00000180971 1963 ntBASIC24.63■■□□□ 1.53
Trav8n-2A0A075B633 Shf-201ENSMUST00000048635 1431 ntAPPRIS P2 TSL 1 (best) BASIC24.63■■□□□ 1.53
Trav8n-2A0A075B633 Tmeff1-202ENSMUST00000123476 1224 ntAPPRIS P1 TSL 1 (best) BASIC24.62■■□□□ 1.53
Trav8n-2A0A075B633 AC150314.2-201ENSMUST00000214135 834 ntTSL 5 BASIC24.62■■□□□ 1.53
Trav8n-2A0A075B633 Syt7-201ENSMUST00000073899 1605 ntAPPRIS P1 TSL 1 (best) BASIC24.61■■□□□ 1.53
Trav8n-2A0A075B633 Gm45855-201ENSMUST00000212546 880 ntBASIC24.58■■□□□ 1.53
Trav8n-2A0A075B633 Nrtn-201ENSMUST00000044752 1023 ntAPPRIS P1 TSL 1 (best) BASIC24.58■■□□□ 1.53
Trav8n-2A0A075B633 Gm5601-202ENSMUST00000207161 1437 ntTSL 1 (best) BASIC24.58■■□□□ 1.53
Trav8n-2A0A075B633 A530058N18Rik-201ENSMUST00000128469 646 ntTSL 2 BASIC24.57■■□□□ 1.52
Trav8n-2A0A075B633 Kcnmb4os2-201ENSMUST00000080943 1571 ntTSL 5 BASIC24.54■■□□□ 1.52
Trav8n-2A0A075B633 Gm42517-201ENSMUST00000197216 1850 ntAPPRIS P1 BASIC24.53■■□□□ 1.52
Trav8n-2A0A075B633 Tmem259-201ENSMUST00000052885 2225 ntAPPRIS P1 TSL 1 (best) BASIC24.53■■□□□ 1.52
Trav8n-2A0A075B633 Tnfsfm13-201ENSMUST00000108649 1049 ntAPPRIS ALT2 TSL 5 BASIC24.53■■□□□ 1.52
Trav8n-2A0A075B633 Pkdcc-204ENSMUST00000170794 2446 ntAPPRIS P1 TSL 1 (best) BASIC24.52■■□□□ 1.52
Trav8n-2A0A075B633 Ube2q2-202ENSMUST00000121677 1680 ntAPPRIS ALT2 TSL 5 BASIC24.51■■□□□ 1.51
Trav8n-2A0A075B633 A530058N18Rik-207ENSMUST00000152254 1211 ntTSL 1 (best) BASIC24.51■■□□□ 1.51
Trav8n-2A0A075B633 Zic2-201ENSMUST00000075888 2440 ntAPPRIS P1 TSL 1 (best) BASIC24.49■■□□□ 1.51
Trav8n-2A0A075B633 Dtnbp1-201ENSMUST00000072329 1362 ntAPPRIS P2 TSL 1 (best) BASIC24.49■■□□□ 1.51
Trav8n-2A0A075B633 Dapk3-209ENSMUST00000219850 1482 ntAPPRIS P1 TSL 1 (best) BASIC24.49■■□□□ 1.51
Trav8n-2A0A075B633 Cdk2ap1-201ENSMUST00000031341 1315 ntAPPRIS P2 TSL 1 (best) BASIC24.47■■□□□ 1.51
Trav8n-2A0A075B633 Hoxa13-201ENSMUST00000047993 1309 ntAPPRIS ALT2 TSL 5 BASIC24.47■■□□□ 1.51
Trav8n-2A0A075B633 Rnf215-201ENSMUST00000003677 1874 ntAPPRIS P1 TSL 1 (best) BASIC24.45■■□□□ 1.51
Trav8n-2A0A075B633 1110008F13Rik-201ENSMUST00000029165 1045 ntAPPRIS P1 TSL 1 (best) BASIC24.45■■□□□ 1.5
Trav8n-2A0A075B633 Crlf1-201ENSMUST00000008032 1644 ntAPPRIS P1 TSL 1 (best) BASIC24.45■■□□□ 1.5
Trav8n-2A0A075B633 Ccm2l-201ENSMUST00000109800 2158 ntAPPRIS P1 TSL 5 BASIC24.44■■□□□ 1.5
Trav8n-2A0A075B633 Trp53rkb-202ENSMUST00000065753 1375 ntTSL 1 (best) BASIC24.43■■□□□ 1.5
Trav8n-2A0A075B633 Atp1b3-201ENSMUST00000034983 1994 ntAPPRIS P1 TSL 1 (best) BASIC24.41■■□□□ 1.5
Trav8n-2A0A075B633 4932443I19Rik-201ENSMUST00000166277 799 ntAPPRIS P2 TSL 1 (best) BASIC24.4■■□□□ 1.5
Trav8n-2A0A075B633 Smarcc2-205ENSMUST00000218228 603 ntTSL 5 BASIC24.37■■□□□ 1.49
Trav8n-2A0A075B633 Aard-201ENSMUST00000090025 1348 ntAPPRIS P1 TSL 1 (best) BASIC24.36■■□□□ 1.49
Trav8n-2A0A075B633 Fbxo6-201ENSMUST00000030858 1346 ntAPPRIS P1 TSL 1 (best) BASIC24.35■■□□□ 1.49
Trav8n-2A0A075B633 Gm9397-201ENSMUST00000200125 605 ntBASIC24.35■■□□□ 1.49
Trav8n-2A0A075B633 Abhd17a-201ENSMUST00000003436 1468 ntAPPRIS P1 TSL 1 (best) BASIC24.33■■□□□ 1.49
Trav8n-2A0A075B633 Macrod2-205ENSMUST00000110063 845 ntTSL 5 BASIC24.32■■□□□ 1.48
Trav8n-2A0A075B633 Capns1-201ENSMUST00000001845 1600 ntAPPRIS P2 TSL 5 BASIC24.32■■□□□ 1.48
Trav8n-2A0A075B633 Mthfd2l-203ENSMUST00000202781 688 ntTSL 1 (best) BASIC24.31■■□□□ 1.48
Trav8n-2A0A075B633 Emx1-201ENSMUST00000045942 1561 ntAPPRIS P1 TSL 1 (best) BASIC24.3■■□□□ 1.48
Trav8n-2A0A075B633 Dedd-201ENSMUST00000064950 1618 ntAPPRIS P1 TSL 1 (best) BASIC24.3■■□□□ 1.48
Trav8n-2A0A075B633 Fcho2-203ENSMUST00000109403 1523 ntTSL 5 BASIC24.29■■□□□ 1.48
Trav8n-2A0A075B633 Dut-202ENSMUST00000082122 1020 ntTSL 1 (best) BASIC24.27■■□□□ 1.48
Trav8n-2A0A075B633 Cadm4-201ENSMUST00000068023 2161 ntAPPRIS P1 TSL 1 (best) BASIC24.27■■□□□ 1.48
Trav8n-2A0A075B633 Cds2-203ENSMUST00000110158 1247 ntTSL 1 (best) BASIC24.25■■□□□ 1.47
Trav8n-2A0A075B633 Pradc1-202ENSMUST00000113770 610 ntTSL 1 (best) BASIC24.25■■□□□ 1.47
Trav8n-2A0A075B633 BC037032-205ENSMUST00000187080 508 ntTSL 5 BASIC24.25■■□□□ 1.47
Trav8n-2A0A075B633 Qrich1-209ENSMUST00000194385 975 ntTSL 2 BASIC24.25■■□□□ 1.47
Trav8n-2A0A075B633 Mxra7-202ENSMUST00000047715 757 ntAPPRIS ALT2 TSL 1 (best) BASIC24.25■■□□□ 1.47
Trav8n-2A0A075B633 C1qtnf5-201ENSMUST00000114815 1215 ntAPPRIS P1 TSL 1 (best) BASIC24.24■■□□□ 1.47
Trav8n-2A0A075B633 Crip2-201ENSMUST00000084882 1439 ntAPPRIS P1 TSL 1 (best) BASIC24.24■■□□□ 1.47
Trav8n-2A0A075B633 Dhrs13-203ENSMUST00000122342 1791 ntTSL 1 (best) BASIC24.22■■□□□ 1.47
Trav8n-2A0A075B633 Gng13-201ENSMUST00000115108 347 ntAPPRIS P1 TSL 1 (best) BASIC24.22■■□□□ 1.47
Trav8n-2A0A075B633 C2cd4d-201ENSMUST00000169433 1321 ntAPPRIS P1 TSL 3 BASIC24.2■■□□□ 1.46
Trav8n-2A0A075B633 Gm20503-201ENSMUST00000174664 1294 ntAPPRIS P1 TSL 5 BASIC24.2■■□□□ 1.46
Trav8n-2A0A075B633 2810459M11Rik-201ENSMUST00000027429 1225 ntAPPRIS ALT2 TSL 1 (best) BASIC24.2■■□□□ 1.46
Trav8n-2A0A075B633 March2-205ENSMUST00000173015 1418 ntTSL 3 BASIC24.18■■□□□ 1.46
Trav8n-2A0A075B633 Ppp1r14b-201ENSMUST00000070850 919 ntAPPRIS P1 TSL 1 (best) BASIC24.18■■□□□ 1.46
Trav8n-2A0A075B633 E330040D14Rik-201ENSMUST00000192299 1374 ntBASIC24.17■■□□□ 1.46
Trav8n-2A0A075B633 Spg7-201ENSMUST00000108868 845 ntTSL 2 BASIC24.14■■□□□ 1.45
Trav8n-2A0A075B633 Lactb-202ENSMUST00000215172 1806 ntTSL 1 (best) BASIC24.14■■□□□ 1.45
Trav8n-2A0A075B633 Sept3-202ENSMUST00000116423 2467 ntAPPRIS P1 TSL 1 (best) BASIC24.13■■□□□ 1.45
Trav8n-2A0A075B633 Vsig8-202ENSMUST00000177086 1519 ntTSL 1 (best) BASIC24.13■■□□□ 1.45
Trav8n-2A0A075B633 1810026B05Rik-202ENSMUST00000184554 782 ntTSL 3 BASIC24.12■■□□□ 1.45
Trav8n-2A0A075B633 Tnfsf12-202ENSMUST00000181810 1435 ntAPPRIS P1 TSL 1 (best) BASIC24.11■■□□□ 1.45
Trav8n-2A0A075B633 Orai1-201ENSMUST00000051016 1482 ntAPPRIS P1 TSL 1 (best) BASIC24.11■■□□□ 1.45
Trav8n-2A0A075B633 Foxd3-201ENSMUST00000087285 2324 ntAPPRIS P1 BASIC24.1■■□□□ 1.45
Trav8n-2A0A075B633 Ranbp1-202ENSMUST00000115645 1085 ntAPPRIS P1 TSL 1 (best) BASIC24.09■■□□□ 1.45
Trav8n-2A0A075B633 1810026B05Rik-206ENSMUST00000187421 519 ntTSL 3 BASIC24.09■■□□□ 1.45
Trav8n-2A0A075B633 Egln2-201ENSMUST00000080058 2107 ntAPPRIS P1 TSL 1 (best) BASIC24.09■■□□□ 1.45
Trav8n-2A0A075B633 Ube2f-202ENSMUST00000171112 1547 ntAPPRIS P1 TSL 1 (best) BASIC24.09■■□□□ 1.45
Trav8n-2A0A075B633 A330023F24Rik-201ENSMUST00000181226 955 ntTSL 1 (best) BASIC24.08■■□□□ 1.45
Trav8n-2A0A075B633 Gm24970-201ENSMUST00000175582 82 ntBASIC24.06■■□□□ 1.44
Trav8n-2A0A075B633 Cib1-201ENSMUST00000065163 1047 ntAPPRIS P1 TSL 1 (best) BASIC24.06■■□□□ 1.44
Trav8n-2A0A075B633 Tmem243-201ENSMUST00000115365 1040 ntAPPRIS P1 TSL 2 BASIC24.04■■□□□ 1.44
Trav8n-2A0A075B633 Ubl4a-207ENSMUST00000178691 1038 ntAPPRIS P1 TSL 2 BASIC24.04■■□□□ 1.44
Trav8n-2A0A075B633 Gnai2-201ENSMUST00000055704 2215 ntAPPRIS P1 TSL 1 (best) BASIC24.04■■□□□ 1.44
Trav8n-2A0A075B633 Calm3-201ENSMUST00000019514 2290 ntAPPRIS P1 TSL 1 (best) BASIC24.03■■□□□ 1.44
Trav8n-2A0A075B633 Gm12523-201ENSMUST00000148844 599 ntTSL 5 BASIC24.01■■□□□ 1.43
Trav8n-2A0A075B633 Tsen34-203ENSMUST00000108629 1238 ntTSL 1 (best) BASIC24■■□□□ 1.43
Trav8n-2A0A075B633 Stard3nl-210ENSMUST00000222869 1030 ntTSL 5 BASIC24■■□□□ 1.43
Trav8n-2A0A075B633 Tprgl-201ENSMUST00000030896 1724 ntAPPRIS P1 TSL 1 (best) BASIC24■■□□□ 1.43
Trav8n-2A0A075B633 Hrh3-208ENSMUST00000171736 906 ntTSL 5 BASIC23.99■■□□□ 1.43
Trav8n-2A0A075B633 AY074887-201ENSMUST00000054018 769 ntAPPRIS P1 BASIC23.97■■□□□ 1.43
Trav8n-2A0A075B633 Cetn4-202ENSMUST00000075537 762 ntTSL 3 BASIC23.96■■□□□ 1.43
Trav8n-2A0A075B633 Gm26699-201ENSMUST00000180825 2291 ntTSL 5 BASIC23.96■■□□□ 1.43
Trav8n-2A0A075B633 Evx2-202ENSMUST00000173623 1428 ntAPPRIS P2 TSL 1 (best) BASIC23.94■■□□□ 1.42
Trav8n-2A0A075B633 Macrod1-201ENSMUST00000040261 1274 ntAPPRIS P1 TSL 1 (best) BASIC23.94■■□□□ 1.42
Trav8n-2A0A075B633 Sowahd-201ENSMUST00000060057 1574 ntAPPRIS P1 BASIC23.93■■□□□ 1.42
Trav8n-2A0A075B633 Bok-201ENSMUST00000027499 1468 ntAPPRIS P1 TSL 1 (best) BASIC23.93■■□□□ 1.42
Trav8n-2A0A075B633 Rnd2-201ENSMUST00000001347 1394 ntAPPRIS P1 TSL 1 (best) BASIC23.92■■□□□ 1.42
Trav8n-2A0A075B633 Rpia-201ENSMUST00000066134 1829 ntAPPRIS P1 TSL 1 (best) BASIC23.92■■□□□ 1.42
Trav8n-2A0A075B633 Gkap1-201ENSMUST00000091579 1523 ntAPPRIS P1 TSL 1 (best) BASIC23.92■■□□□ 1.42
Trav8n-2A0A075B633 Epcam-201ENSMUST00000053577 2040 ntAPPRIS P1 TSL 5 BASIC23.92■■□□□ 1.42
Trav8n-2A0A075B633 Ssbp3-203ENSMUST00000097934 1742 ntAPPRIS ALT2 TSL 5 BASIC23.92■■□□□ 1.42
Trav8n-2A0A075B633 Zxdb-201ENSMUST00000101388 5619 ntAPPRIS P1 BASIC23.91■■□□□ 1.42
Trav8n-2A0A075B633 Tnfsfm13-202ENSMUST00000174159 1470 ntAPPRIS ALT2 TSL 2 BASIC23.9■■□□□ 1.42
Trav8n-2A0A075B633 Gm527-201ENSMUST00000058135 1468 ntAPPRIS P1 TSL 1 (best) BASIC23.88■■□□□ 1.41
Trav8n-2A0A075B633 Junos-204ENSMUST00000128094 830 ntTSL 1 (best) BASIC23.87■■□□□ 1.41
Trav8n-2A0A075B633 Znrf3-202ENSMUST00000143746 1022 ntTSL 1 (best) BASIC23.87■■□□□ 1.41
Trav8n-2A0A075B633 Ldb1-208ENSMUST00000185355 2088 ntTSL 1 (best) BASIC23.85■■□□□ 1.41
Retrieved 100 of 76,532 protein–RNA pairs in 90.8 ms