Protein–RNA interactions for Protein: Q9DB34

Chmp2a, Charged multivesicular body protein 2a, mousemouse

Predictions only

Length 222 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Chmp2aQ9DB34 Gm29245-201ENSMUST00000187332 1416 ntBASIC11.26□□□□□ -0.61
Chmp2aQ9DB34 Cyp26b1-205ENSMUST00000205228 4288 ntTSL 1 (best) BASIC11.26□□□□□ -0.61
Chmp2aQ9DB34 Gm19299-202ENSMUST00000215724 1435 ntTSL 1 (best) BASIC11.26□□□□□ -0.61
Chmp2aQ9DB34 Gm20755-201ENSMUST00000196893 1827 ntTSL 1 (best) BASIC11.25□□□□□ -0.61
Chmp2aQ9DB34 Tacc2-217ENSMUST00000209108 3310 ntTSL 1 (best) BASIC11.25□□□□□ -0.61
Chmp2aQ9DB34 Kcnk10-201ENSMUST00000110113 2629 ntAPPRIS ALT2 TSL 1 (best) BASIC11.25□□□□□ -0.61
Chmp2aQ9DB34 Pxdn-208ENSMUST00000220271 6377 ntTSL 5 BASIC11.25□□□□□ -0.61
Chmp2aQ9DB34 Zmym6-201ENSMUST00000046751 4210 ntAPPRIS P1 TSL 1 (best) BASIC11.25□□□□□ -0.61
Chmp2aQ9DB34 Thsd7a-206ENSMUST00000172356 10998 ntAPPRIS ALT2 TSL 5 BASIC11.25□□□□□ -0.61
Chmp2aQ9DB34 Bsnd-201ENSMUST00000054472 2756 ntAPPRIS P1 TSL 1 (best) BASIC11.25□□□□□ -0.61
Chmp2aQ9DB34 Nr1h4-203ENSMUST00000105297 2013 ntTSL 1 (best) BASIC11.25□□□□□ -0.61
Chmp2aQ9DB34 Dlec1-208ENSMUST00000165231 5263 ntAPPRIS P2 TSL 5 BASIC11.25□□□□□ -0.61
Chmp2aQ9DB34 Slurp1-202ENSMUST00000190433 2859 ntAPPRIS P1 TSL 1 (best) BASIC11.25□□□□□ -0.61
Chmp2aQ9DB34 St3gal6-207ENSMUST00000137035 4123 ntAPPRIS P1 TSL 1 (best) BASIC11.25□□□□□ -0.61
Chmp2aQ9DB34 Pcgf2-207ENSMUST00000179765 2485 ntAPPRIS P1 TSL 1 (best) BASIC11.25□□□□□ -0.61
Chmp2aQ9DB34 Hmg20a-206ENSMUST00000217518 2468 ntTSL 1 (best) BASIC11.25□□□□□ -0.61
Chmp2aQ9DB34 Asb15-201ENSMUST00000031696 2088 ntAPPRIS P1 TSL 1 (best) BASIC11.25□□□□□ -0.61
Chmp2aQ9DB34 Ncstn-201ENSMUST00000003550 2901 ntAPPRIS P1 TSL 1 (best) BASIC11.25□□□□□ -0.61
Chmp2aQ9DB34 Ifna2-201ENSMUST00000105147 1032 ntAPPRIS P1 BASIC11.25□□□□□ -0.61
Chmp2aQ9DB34 Oprl1-204ENSMUST00000108767 1248 ntAPPRIS P3 TSL 1 (best) BASIC11.25□□□□□ -0.61
Chmp2aQ9DB34 Vbp1-202ENSMUST00000114070 632 ntTSL 1 (best) BASIC11.25□□□□□ -0.61
Chmp2aQ9DB34 Tmed5-203ENSMUST00000117759 482 ntTSL 1 (best) BASIC11.25□□□□□ -0.61
Chmp2aQ9DB34 Mir1905-201ENSMUST00000122779 82 ntBASIC11.25□□□□□ -0.61
Chmp2aQ9DB34 Fam187b-203ENSMUST00000129773 1213 ntAPPRIS ALT2 TSL 1 (best) BASIC11.25□□□□□ -0.61
Chmp2aQ9DB34 Gm16323-201ENSMUST00000134920 556 ntTSL 3 BASIC11.25□□□□□ -0.61
Chmp2aQ9DB34 Gm15911-201ENSMUST00000138992 809 ntTSL 3 BASIC11.25□□□□□ -0.61
Chmp2aQ9DB34 Gm12744-201ENSMUST00000146976 519 ntTSL 3 BASIC11.25□□□□□ -0.61
Chmp2aQ9DB34 Gm13703-201ENSMUST00000150705 449 ntTSL 2 BASIC11.25□□□□□ -0.61
Chmp2aQ9DB34 Gm7255-201ENSMUST00000187371 908 ntBASIC11.25□□□□□ -0.61
Chmp2aQ9DB34 Gm29283-201ENSMUST00000187394 288 ntTSL 5 BASIC11.25□□□□□ -0.61
Chmp2aQ9DB34 Gm7880-201ENSMUST00000203748 871 ntBASIC11.25□□□□□ -0.61
Chmp2aQ9DB34 Gm31520-203ENSMUST00000204874 647 ntTSL 3 BASIC11.25□□□□□ -0.61
Chmp2aQ9DB34 Gm18059-201ENSMUST00000208073 580 ntBASIC11.25□□□□□ -0.61
Chmp2aQ9DB34 Myl6-203ENSMUST00000217776 562 ntTSL 3 BASIC11.25□□□□□ -0.61
Chmp2aQ9DB34 AC123694.1-201ENSMUST00000219525 644 ntTSL 5 BASIC11.25□□□□□ -0.61
Chmp2aQ9DB34 AC167364.1-201ENSMUST00000221495 784 ntTSL 5 BASIC11.25□□□□□ -0.61
Chmp2aQ9DB34 Spata46-201ENSMUST00000056991 771 ntAPPRIS P1 TSL 1 (best) BASIC11.25□□□□□ -0.61
Chmp2aQ9DB34 Taar7d-201ENSMUST00000092657 1077 ntAPPRIS P1 BASIC11.25□□□□□ -0.61
Chmp2aQ9DB34 Olfr1339-201ENSMUST00000094832 948 ntAPPRIS P1 BASIC11.25□□□□□ -0.61
Chmp2aQ9DB34 Ctxn2-201ENSMUST00000099452 1028 ntAPPRIS P1 TSL 1 (best) BASIC11.25□□□□□ -0.61
Chmp2aQ9DB34 Tubb2b-201ENSMUST00000075774 2182 ntAPPRIS P1 TSL 1 (best) BASIC11.25□□□□□ -0.61
Chmp2aQ9DB34 Ccl22-201ENSMUST00000034231 2216 ntAPPRIS P1 TSL 1 (best) BASIC11.25□□□□□ -0.61
Chmp2aQ9DB34 Cyp11b1-201ENSMUST00000170259 3165 ntAPPRIS P1 TSL 1 (best) BASIC11.25□□□□□ -0.61
Chmp2aQ9DB34 Plpp3-201ENSMUST00000064139 3159 ntAPPRIS P1 TSL 1 (best) BASIC11.25□□□□□ -0.61
Chmp2aQ9DB34 Plcd4-204ENSMUST00000113747 2720 ntAPPRIS ALT2 TSL 1 (best) BASIC11.25□□□□□ -0.61
Chmp2aQ9DB34 Specc1l-201ENSMUST00000040105 5928 ntTSL 5 BASIC11.25□□□□□ -0.61
Chmp2aQ9DB34 Azin1-203ENSMUST00000110329 4217 ntAPPRIS P1 TSL 2 BASIC11.25□□□□□ -0.61
Chmp2aQ9DB34 Mbd1-202ENSMUST00000224047 2838 ntAPPRIS P1 BASIC11.25□□□□□ -0.61
Chmp2aQ9DB34 Ano10-203ENSMUST00000214409 2384 ntTSL 1 (best) BASIC11.25□□□□□ -0.61
Chmp2aQ9DB34 Odf2l-204ENSMUST00000106192 2425 ntAPPRIS P1 TSL 5 BASIC11.25□□□□□ -0.61
Chmp2aQ9DB34 Il17ra-201ENSMUST00000002976 7752 ntAPPRIS P1 TSL 1 (best) BASIC11.25□□□□□ -0.61
Chmp2aQ9DB34 Smok4a-201ENSMUST00000074512 1455 ntBASIC11.25□□□□□ -0.61
Chmp2aQ9DB34 Htr1f-201ENSMUST00000063076 2509 ntAPPRIS P1 TSL 1 (best) BASIC11.25□□□□□ -0.61
Chmp2aQ9DB34 Chrm1-202ENSMUST00000163785 6271 ntAPPRIS P1 TSL 1 (best) BASIC11.24□□□□□ -0.61
Chmp2aQ9DB34 Nckap5-212ENSMUST00000162877 2630 ntTSL 1 (best) BASIC11.24□□□□□ -0.61
Chmp2aQ9DB34 Taf9b-201ENSMUST00000055497 2633 ntAPPRIS P1 TSL 1 (best) BASIC11.24□□□□□ -0.61
Chmp2aQ9DB34 Scaf1-201ENSMUST00000085383 4293 ntAPPRIS P1 TSL 1 (best) BASIC11.24□□□□□ -0.61
Chmp2aQ9DB34 Tctn3-201ENSMUST00000025981 2743 ntAPPRIS P2 TSL 1 (best) BASIC11.24□□□□□ -0.61
Chmp2aQ9DB34 Zfp30-202ENSMUST00000122387 3342 ntTSL 1 (best) BASIC11.24□□□□□ -0.61
Chmp2aQ9DB34 Svop-201ENSMUST00000058472 3379 ntAPPRIS P1 TSL 1 (best) BASIC11.24□□□□□ -0.61
Chmp2aQ9DB34 Bace1-202ENSMUST00000078111 4041 ntTSL 1 (best) BASIC11.24□□□□□ -0.61
Chmp2aQ9DB34 Tyw1-202ENSMUST00000044204 4698 ntTSL 1 (best) BASIC11.24□□□□□ -0.61
Chmp2aQ9DB34 4930432K21Rik-202ENSMUST00000118856 2366 ntAPPRIS P4 TSL 1 (best) BASIC11.24□□□□□ -0.61
Chmp2aQ9DB34 Prg4-201ENSMUST00000006171 1869 ntTSL 1 (best) BASIC11.24□□□□□ -0.61
Chmp2aQ9DB34 Thbs4-201ENSMUST00000022213 3198 ntAPPRIS P1 TSL 1 (best) BASIC11.24□□□□□ -0.61
Chmp2aQ9DB34 Adgrl3-204ENSMUST00000117407 5705 ntTSL 5 BASIC11.24□□□□□ -0.61
Chmp2aQ9DB34 Ighv1-52-201ENSMUST00000103522 348 ntAPPRIS ALT2 BASIC11.24□□□□□ -0.61
Chmp2aQ9DB34 Ighv1-61-201ENSMUST00000103531 351 ntAPPRIS P1 BASIC11.24□□□□□ -0.61
Chmp2aQ9DB34 Gm25562-201ENSMUST00000104608 133 ntBASIC11.24□□□□□ -0.61
Chmp2aQ9DB34 Gm12990-201ENSMUST00000120372 468 ntBASIC11.24□□□□□ -0.61
Chmp2aQ9DB34 Gm12136-201ENSMUST00000120460 1209 ntBASIC11.24□□□□□ -0.61
Chmp2aQ9DB34 Gm12798-201ENSMUST00000124786 666 ntTSL 5 BASIC11.24□□□□□ -0.61
Chmp2aQ9DB34 Zfp667-204ENSMUST00000153840 596 ntTSL 3 BASIC11.24□□□□□ -0.61
Chmp2aQ9DB34 Gm5529-201ENSMUST00000165691 891 ntBASIC11.24□□□□□ -0.61
Chmp2aQ9DB34 Park2-203ENSMUST00000168593 735 ntTSL 5 BASIC11.24□□□□□ -0.61
Chmp2aQ9DB34 Uba52-ps-201ENSMUST00000183770 379 ntBASIC11.24□□□□□ -0.61
Chmp2aQ9DB34 Gm19091-201ENSMUST00000208120 978 ntBASIC11.24□□□□□ -0.61
Chmp2aQ9DB34 Gm45338-204ENSMUST00000210658 1105 ntTSL 5 BASIC11.24□□□□□ -0.61
Chmp2aQ9DB34 Nop10-201ENSMUST00000028553 1109 ntAPPRIS P1 TSL 1 (best) BASIC11.24□□□□□ -0.61
Chmp2aQ9DB34 Lsm8-201ENSMUST00000056398 807 ntAPPRIS P1 TSL 1 (best) BASIC11.24□□□□□ -0.61
Chmp2aQ9DB34 Prss3-201ENSMUST00000096003 822 ntAPPRIS P1 TSL 1 (best) BASIC11.24□□□□□ -0.61
Chmp2aQ9DB34 Olfr553-201ENSMUST00000098222 981 ntAPPRIS P1 BASIC11.24□□□□□ -0.61
Chmp2aQ9DB34 Wfdc6a-201ENSMUST00000099096 805 ntAPPRIS P1 TSL 1 (best) BASIC11.24□□□□□ -0.61
Chmp2aQ9DB34 Axin2-202ENSMUST00000106711 2551 ntAPPRIS ALT2 TSL 5 BASIC11.24□□□□□ -0.61
Chmp2aQ9DB34 Rasal1-201ENSMUST00000031606 3212 ntAPPRIS P1 TSL 1 (best) BASIC11.24□□□□□ -0.61
Chmp2aQ9DB34 Clock-201ENSMUST00000075159 7478 ntAPPRIS P3 TSL 1 (best) BASIC11.24□□□□□ -0.61
Chmp2aQ9DB34 Rgs12-203ENSMUST00000114280 2777 ntTSL 1 (best) BASIC11.24□□□□□ -0.61
Chmp2aQ9DB34 Zc3h12a-201ENSMUST00000036188 2755 ntAPPRIS P1 TSL 1 (best) BASIC11.24□□□□□ -0.61
Chmp2aQ9DB34 Lnx1-202ENSMUST00000087161 2753 ntAPPRIS P1 TSL 5 BASIC11.24□□□□□ -0.61
Chmp2aQ9DB34 Cyp26b1-202ENSMUST00000168003 4170 ntAPPRIS P1 TSL 1 (best) BASIC11.24□□□□□ -0.61
Chmp2aQ9DB34 Cyp26b1-201ENSMUST00000077705 4157 ntAPPRIS P1 TSL 1 (best) BASIC11.24□□□□□ -0.61
Chmp2aQ9DB34 Wnk1-204ENSMUST00000088646 8364 ntAPPRIS ALT2 TSL 1 (best) BASIC11.24□□□□□ -0.61
Chmp2aQ9DB34 Acnat1-202ENSMUST00000107697 1446 ntAPPRIS ALT2 TSL 5 BASIC11.24□□□□□ -0.61
Chmp2aQ9DB34 Polr1e-203ENSMUST00000107814 1470 ntAPPRIS ALT2 TSL 1 (best) BASIC11.24□□□□□ -0.61
Chmp2aQ9DB34 Tfap2b-204ENSMUST00000187754 3023 ntTSL 1 (best) BASIC11.24□□□□□ -0.61
Chmp2aQ9DB34 Npy1r-201ENSMUST00000039303 3001 ntAPPRIS P1 TSL 1 (best) BASIC11.24□□□□□ -0.61
Chmp2aQ9DB34 Impdh2-ps-201ENSMUST00000120826 1545 ntBASIC11.24□□□□□ -0.61
Chmp2aQ9DB34 Krt33b-201ENSMUST00000073890 1581 ntAPPRIS P1 TSL 1 (best) BASIC11.24□□□□□ -0.61
Chmp2aQ9DB34 Gm37368-201ENSMUST00000193173 3212 ntBASIC11.24□□□□□ -0.61
Chmp2aQ9DB34 Gm45165-201ENSMUST00000207763 1631 ntBASIC11.24□□□□□ -0.61
Retrieved 100 of 76,532 protein–RNA pairs in 61.8 ms