Protein–RNA interactions for Protein: P54846

Nrl, Neural retina-specific leucine zipper protein, mousemouse

Predictions only

Length 237 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NrlP54846 Dnm3-202ENSMUST00000086074 7523 ntAPPRIS ALT2 TSL 5 BASIC11.52□□□□□ -0.57
NrlP54846 Anxa11-202ENSMUST00000112364 1625 ntTSL 1 (best) BASIC11.52□□□□□ -0.57
NrlP54846 Lrrc74b-203ENSMUST00000100123 2231 ntAPPRIS P3 TSL 1 (best) BASIC11.52□□□□□ -0.57
NrlP54846 Ighg2b-202ENSMUST00000192188 2566 ntAPPRIS P5 BASIC11.52□□□□□ -0.57
NrlP54846 Gm5159-201ENSMUST00000212733 1652 ntBASIC11.52□□□□□ -0.57
NrlP54846 AC122273.1-201ENSMUST00000213634 2327 ntBASIC11.52□□□□□ -0.57
NrlP54846 Mical1-202ENSMUST00000099934 3292 ntTSL 1 (best) BASIC11.52□□□□□ -0.57
NrlP54846 Bco1-202ENSMUST00000167370 1747 ntAPPRIS ALT2 TSL 5 BASIC11.52□□□□□ -0.57
NrlP54846 Zim1-203ENSMUST00000203908 1740 ntAPPRIS P1 TSL 5 BASIC11.52□□□□□ -0.57
NrlP54846 Gm10604-201ENSMUST00000098260 1706 ntAPPRIS P1 BASIC11.52□□□□□ -0.57
NrlP54846 Csde1-207ENSMUST00000197827 2671 ntAPPRIS P3 TSL 5 BASIC11.52□□□□□ -0.57
NrlP54846 Ttll13-201ENSMUST00000058266 3010 ntAPPRIS P1 TSL 5 BASIC11.52□□□□□ -0.57
NrlP54846 Ncf1-202ENSMUST00000111275 2721 ntAPPRIS P3 TSL 1 (best) BASIC11.51□□□□□ -0.57
NrlP54846 Gm45053-201ENSMUST00000206112 2499 ntBASIC11.51□□□□□ -0.57
NrlP54846 Cfap74-209ENSMUST00000151083 5487 ntAPPRIS ALT2 TSL 5 BASIC11.51□□□□□ -0.57
NrlP54846 Gm19178-201ENSMUST00000217524 1819 ntBASIC11.51□□□□□ -0.57
NrlP54846 Fnbp1l-201ENSMUST00000162409 5198 ntTSL 5 BASIC11.51□□□□□ -0.57
NrlP54846 Nsd3-210ENSMUST00000153597 1865 ntTSL 1 (best) BASIC11.51□□□□□ -0.57
NrlP54846 Oplah-201ENSMUST00000023222 3970 ntAPPRIS P1 TSL 1 (best) BASIC11.51□□□□□ -0.57
NrlP54846 Dtx3l-202ENSMUST00000114885 2648 ntTSL 1 (best) BASIC11.51□□□□□ -0.57
NrlP54846 Gm45449-201ENSMUST00000211485 1960 ntTSL 1 (best) BASIC11.51□□□□□ -0.57
NrlP54846 Bcl2l11-204ENSMUST00000103211 672 ntAPPRIS ALT2 TSL 2 BASIC11.51□□□□□ -0.57
NrlP54846 Gm24933-201ENSMUST00000103762 110 ntBASIC11.51□□□□□ -0.57
NrlP54846 Gm23252-201ENSMUST00000103776 110 ntBASIC11.51□□□□□ -0.57
NrlP54846 Pex5l-203ENSMUST00000108221 1187 ntTSL 1 (best) BASIC11.51□□□□□ -0.57
NrlP54846 2610203C22Rik-201ENSMUST00000115480 1246 ntTSL 1 (best) BASIC11.51□□□□□ -0.57
NrlP54846 Gm12606-202ENSMUST00000129527 1184 ntTSL 1 (best) BASIC11.51□□□□□ -0.57
NrlP54846 Gm16048-201ENSMUST00000134250 663 ntTSL 3 BASIC11.51□□□□□ -0.57
NrlP54846 Gm13817-201ENSMUST00000142249 604 ntTSL 3 BASIC11.51□□□□□ -0.57
NrlP54846 Gm4858-201ENSMUST00000179064 735 ntTSL 5 BASIC11.51□□□□□ -0.57
NrlP54846 Gm26443-201ENSMUST00000179610 110 ntBASIC11.51□□□□□ -0.57
NrlP54846 Gm26906-201ENSMUST00000180523 1228 ntTSL 5 BASIC11.51□□□□□ -0.57
NrlP54846 Gm8601-201ENSMUST00000182096 909 ntBASIC11.51□□□□□ -0.57
NrlP54846 Gm27316-201ENSMUST00000184884 277 ntBASIC11.51□□□□□ -0.57
NrlP54846 Gm43667-201ENSMUST00000198616 1095 ntBASIC11.51□□□□□ -0.57
NrlP54846 Chac2-201ENSMUST00000020553 1018 ntAPPRIS ALT2 TSL 1 (best) BASIC11.51□□□□□ -0.57
NrlP54846 Gm44753-202ENSMUST00000208297 562 ntTSL 5 BASIC11.51□□□□□ -0.57
NrlP54846 Gm7183-201ENSMUST00000213870 1005 ntBASIC11.51□□□□□ -0.57
NrlP54846 Olfr63-201ENSMUST00000067840 955 ntAPPRIS P1 BASIC11.51□□□□□ -0.57
NrlP54846 Krtap3-3-201ENSMUST00000092700 736 ntAPPRIS P1 BASIC11.51□□□□□ -0.57
NrlP54846 Atp5g1-201ENSMUST00000090541 4715 ntAPPRIS P1 TSL 1 (best) BASIC11.51□□□□□ -0.57
NrlP54846 Cd93-201ENSMUST00000099269 6677 ntAPPRIS P1 TSL 1 (best) BASIC11.51□□□□□ -0.57
NrlP54846 Itpr3-201ENSMUST00000049308 8990 ntAPPRIS P1 TSL 1 (best) BASIC11.51□□□□□ -0.57
NrlP54846 Ncdn-201ENSMUST00000030637 3681 ntAPPRIS P1 TSL 1 (best) BASIC11.51□□□□□ -0.57
NrlP54846 Pigq-219ENSMUST00000208071 2926 ntAPPRIS ALT2 TSL 5 BASIC11.51□□□□□ -0.57
NrlP54846 Dll4-201ENSMUST00000102517 3747 ntAPPRIS P1 TSL 1 (best) BASIC11.51□□□□□ -0.57
NrlP54846 Igf1-207ENSMUST00000122386 1391 ntAPPRIS P1 TSL 1 (best) BASIC11.51□□□□□ -0.57
NrlP54846 Cpeb1-209ENSMUST00000178892 1777 ntAPPRIS ALT2 TSL 1 (best) BASIC11.51□□□□□ -0.57
NrlP54846 Kdelc1-201ENSMUST00000027213 1765 ntTSL 1 (best) BASIC11.51□□□□□ -0.57
NrlP54846 Lsamp-201ENSMUST00000078873 2951 ntTSL 1 (best) BASIC11.51□□□□□ -0.57
NrlP54846 Eml5-201ENSMUST00000065716 9482 ntTSL 5 BASIC11.51□□□□□ -0.57
NrlP54846 Entpd8-201ENSMUST00000044078 2299 ntAPPRIS P2 TSL 1 (best) BASIC11.51□□□□□ -0.57
NrlP54846 Pls3-201ENSMUST00000033547 3242 ntAPPRIS P1 TSL 1 (best) BASIC11.5□□□□□ -0.57
NrlP54846 6030443J06Rik-201ENSMUST00000181209 2380 ntTSL 1 (best) BASIC11.5□□□□□ -0.57
NrlP54846 Elavl2-204ENSMUST00000107110 3671 ntAPPRIS ALT1 TSL 1 (best) BASIC11.5□□□□□ -0.57
NrlP54846 Cpn2-201ENSMUST00000064856 4583 ntAPPRIS P1 TSL 1 (best) BASIC11.5□□□□□ -0.57
NrlP54846 Stk17b-201ENSMUST00000027263 3293 ntAPPRIS P1 TSL 1 (best) BASIC11.5□□□□□ -0.57
NrlP54846 Rapgef3-205ENSMUST00000129223 3750 ntTSL 1 (best) BASIC11.5□□□□□ -0.57
NrlP54846 Gm45496-201ENSMUST00000209918 2917 ntBASIC11.5□□□□□ -0.57
NrlP54846 Tra2b-204ENSMUST00000161286 3403 ntAPPRIS P1 TSL 1 (best) BASIC11.5□□□□□ -0.57
NrlP54846 Gm44913-201ENSMUST00000208060 2990 ntBASIC11.5□□□□□ -0.57
NrlP54846 Numa1-201ENSMUST00000084852 7180 ntAPPRIS P1 TSL 1 (best) BASIC11.5□□□□□ -0.57
NrlP54846 Gm26686-201ENSMUST00000181951 3467 ntTSL 1 (best) BASIC11.5□□□□□ -0.57
NrlP54846 Atp6v0e2-202ENSMUST00000203011 1612 ntTSL 2 BASIC11.5□□□□□ -0.57
NrlP54846 Ckap2-201ENSMUST00000046916 2593 ntAPPRIS P1 TSL 1 (best) BASIC11.5□□□□□ -0.57
NrlP54846 Trmt12-201ENSMUST00000036937 4454 ntAPPRIS P1 BASIC11.5□□□□□ -0.57
NrlP54846 Dync1i2-201ENSMUST00000081710 2631 ntAPPRIS P3 TSL 1 (best) BASIC11.5□□□□□ -0.57
NrlP54846 Mapkap1-209ENSMUST00000147337 3111 ntAPPRIS P2 TSL 1 (best) BASIC11.5□□□□□ -0.57
NrlP54846 Tbl2-204ENSMUST00000153183 7488 ntAPPRIS P1 TSL 1 (best) BASIC11.5□□□□□ -0.57
NrlP54846 Acvrl1-201ENSMUST00000000542 3640 ntAPPRIS P1 TSL 1 (best) BASIC11.5□□□□□ -0.57
NrlP54846 Samhd1-203ENSMUST00000109549 3245 ntAPPRIS ALT2 TSL 1 (best) BASIC11.5□□□□□ -0.57
NrlP54846 Olfr1263-201ENSMUST00000111507 1029 ntAPPRIS P1 BASIC11.5□□□□□ -0.57
NrlP54846 Cryzl1-202ENSMUST00000114023 1154 ntAPPRIS P1 TSL 1 (best) BASIC11.5□□□□□ -0.57
NrlP54846 Gm15707-201ENSMUST00000118804 996 ntBASIC11.5□□□□□ -0.57
NrlP54846 Cdk1-202ENSMUST00000119827 1253 ntAPPRIS P1 TSL 5 BASIC11.5□□□□□ -0.57
NrlP54846 Cryzl1-206ENSMUST00000124282 1187 ntTSL 5 BASIC11.5□□□□□ -0.57
NrlP54846 Gm12000-201ENSMUST00000132007 629 ntTSL 1 (best) BASIC11.5□□□□□ -0.57
NrlP54846 Mir133a-1hg-201ENSMUST00000179771 395 ntTSL 3 BASIC11.5□□□□□ -0.57
NrlP54846 Zcwpw2-203ENSMUST00000187803 372 ntBASIC11.5□□□□□ -0.57
NrlP54846 Gm37590-201ENSMUST00000193294 603 ntTSL 5 BASIC11.5□□□□□ -0.57
NrlP54846 Gm6439-201ENSMUST00000199849 862 ntBASIC11.5□□□□□ -0.57
NrlP54846 Cldnd2-202ENSMUST00000206839 583 ntAPPRIS P1 TSL 2 BASIC11.5□□□□□ -0.57
NrlP54846 Pigx-212ENSMUST00000215073 765 ntAPPRIS P3 TSL 1 (best) BASIC11.5□□□□□ -0.57
NrlP54846 AC107752.1-201ENSMUST00000219362 469 ntBASIC11.5□□□□□ -0.57
NrlP54846 Gm9736-201ENSMUST00000219969 834 ntAPPRIS P1 BASIC11.5□□□□□ -0.57
NrlP54846 AC154759.1-201ENSMUST00000224137 1159 ntBASIC11.5□□□□□ -0.57
NrlP54846 BX649293.1-201ENSMUST00000227437 631 ntBASIC11.5□□□□□ -0.57
NrlP54846 Rab29-201ENSMUST00000027693 1226 ntAPPRIS P1 TSL 1 (best) BASIC11.5□□□□□ -0.57
NrlP54846 Rps3a2-201ENSMUST00000074245 792 ntBASIC11.5□□□□□ -0.57
NrlP54846 Hgs-203ENSMUST00000106205 2898 ntAPPRIS ALT2 TSL 5 BASIC11.5□□□□□ -0.57
NrlP54846 Ttc14-201ENSMUST00000099153 9661 ntAPPRIS P3 TSL 1 (best) BASIC11.5□□□□□ -0.57
NrlP54846 Slc6a2-202ENSMUST00000165470 6007 ntAPPRIS P1 TSL 1 (best) BASIC11.5□□□□□ -0.57
NrlP54846 Myh2-201ENSMUST00000018641 6018 ntAPPRIS P1 TSL 5 BASIC11.5□□□□□ -0.57
NrlP54846 Gm17836-201ENSMUST00000191976 1302 ntBASIC11.5□□□□□ -0.57
NrlP54846 Tcof1-204ENSMUST00000176630 4529 ntAPPRIS P3 TSL 5 BASIC11.5□□□□□ -0.57
NrlP54846 Tmem88b-201ENSMUST00000097742 3471 ntAPPRIS P1 TSL 1 (best) BASIC11.5□□□□□ -0.57
NrlP54846 Nfe2l1-212ENSMUST00000169828 3530 ntTSL 2 BASIC11.5□□□□□ -0.57
NrlP54846 Tpp2-201ENSMUST00000087933 4649 ntTSL 1 (best) BASIC11.5□□□□□ -0.57
NrlP54846 Katnal2-205ENSMUST00000126153 1942 ntAPPRIS P1 TSL 1 (best) BASIC11.5□□□□□ -0.57
NrlP54846 Cdhr4-211ENSMUST00000177173 2480 ntAPPRIS P1 TSL 5 BASIC11.5□□□□□ -0.57
Retrieved 100 of 76,532 protein–RNA pairs in 72.4 ms