Protein–RNA interactions for Protein: Q99LF4

Rtcb, tRNA-splicing ligase RtcB homolog, mousemouse

Known RBP Predictions only

Length 505 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RtcbQ99LF4 Fzd6-201ENSMUST00000022906 4081 ntAPPRIS P1 TSL 1 (best) BASIC13.34□□□□□ -0.27
RtcbQ99LF4 Csrnp2-201ENSMUST00000061457 4126 ntAPPRIS P1 TSL 1 (best) BASIC13.34□□□□□ -0.27
RtcbQ99LF4 Kcnk5-201ENSMUST00000024011 3392 ntAPPRIS P1 TSL 1 (best) BASIC13.34□□□□□ -0.27
RtcbQ99LF4 1110046J04Rik-202ENSMUST00000180906 2776 ntBASIC13.34□□□□□ -0.27
RtcbQ99LF4 Hnrnpr-201ENSMUST00000084219 2647 ntTSL 1 (best) BASIC13.34□□□□□ -0.27
RtcbQ99LF4 Trim23-201ENSMUST00000022225 3416 ntAPPRIS P1 TSL 1 (best) BASIC13.34□□□□□ -0.27
RtcbQ99LF4 Fgd3-203ENSMUST00000110087 4698 ntAPPRIS P1 TSL 1 (best) BASIC13.34□□□□□ -0.27
RtcbQ99LF4 Lrp2-203ENSMUST00000100051 4359 ntTSL 1 (best) BASIC13.34□□□□□ -0.27
RtcbQ99LF4 Pik3cd-203ENSMUST00000105689 3132 ntAPPRIS ALT1 TSL 1 (best) BASIC13.34□□□□□ -0.27
RtcbQ99LF4 Jmjd4-202ENSMUST00000108777 4351 ntAPPRIS P1 TSL 1 (best) BASIC13.34□□□□□ -0.27
RtcbQ99LF4 Ttc7-202ENSMUST00000125875 3917 ntTSL 2 BASIC13.34□□□□□ -0.27
RtcbQ99LF4 Galnt10-201ENSMUST00000066987 4715 ntAPPRIS P1 TSL 1 (best) BASIC13.34□□□□□ -0.27
RtcbQ99LF4 Gm12153-201ENSMUST00000148504 2509 ntTSL 1 (best) BASIC13.34□□□□□ -0.27
RtcbQ99LF4 A930006I01Rik-201ENSMUST00000139065 2229 ntTSL 1 (best) BASIC13.34□□□□□ -0.27
RtcbQ99LF4 Sh3bgrl3-202ENSMUST00000105879 518 ntTSL 3 BASIC13.34□□□□□ -0.27
RtcbQ99LF4 Ccdc32-203ENSMUST00000110834 828 ntTSL 1 (best) BASIC13.34□□□□□ -0.27
RtcbQ99LF4 Gm11235-201ENSMUST00000117763 333 ntBASIC13.34□□□□□ -0.27
RtcbQ99LF4 Gm15476-201ENSMUST00000118247 1191 ntBASIC13.34□□□□□ -0.27
RtcbQ99LF4 Rpl7a-ps11-201ENSMUST00000118791 801 ntBASIC13.34□□□□□ -0.27
RtcbQ99LF4 Rrm2b-207ENSMUST00000146821 420 ntTSL 5 BASIC13.34□□□□□ -0.27
RtcbQ99LF4 Gm16283-201ENSMUST00000149935 522 ntTSL 1 (best) BASIC13.34□□□□□ -0.27
RtcbQ99LF4 Gm13780-201ENSMUST00000150482 1187 ntTSL 5 BASIC13.34□□□□□ -0.27
RtcbQ99LF4 Gm22994-201ENSMUST00000175422 82 ntBASIC13.34□□□□□ -0.27
RtcbQ99LF4 Gm5291-201ENSMUST00000201965 899 ntBASIC13.34□□□□□ -0.27
RtcbQ99LF4 Smim23-201ENSMUST00000020508 620 ntAPPRIS P1 TSL 1 (best) BASIC13.34□□□□□ -0.27
RtcbQ99LF4 Prss23os-203ENSMUST00000208814 975 ntTSL 5 BASIC13.34□□□□□ -0.27
RtcbQ99LF4 Prss23os-204ENSMUST00000209064 972 ntTSL 5 BASIC13.34□□□□□ -0.27
RtcbQ99LF4 AC113291.2-201ENSMUST00000215490 1205 ntTSL 1 (best) BASIC13.34□□□□□ -0.27
RtcbQ99LF4 Gm1000-202ENSMUST00000222329 757 ntTSL 5 BASIC13.34□□□□□ -0.27
RtcbQ99LF4 AC153153.1-201ENSMUST00000225803 793 ntBASIC13.34□□□□□ -0.27
RtcbQ99LF4 Eif3m-201ENSMUST00000028592 1283 ntAPPRIS P1 TSL 1 (best) BASIC13.34□□□□□ -0.27
RtcbQ99LF4 Rpl37-201ENSMUST00000045356 835 ntAPPRIS P1 TSL 1 (best) BASIC13.34□□□□□ -0.27
RtcbQ99LF4 Speer2-201ENSMUST00000076500 1118 ntAPPRIS P1 TSL 2 BASIC13.34□□□□□ -0.27
RtcbQ99LF4 Gm16477-201ENSMUST00000085365 801 ntBASIC13.34□□□□□ -0.27
RtcbQ99LF4 Gm17415-201ENSMUST00000096427 789 ntBASIC13.34□□□□□ -0.27
RtcbQ99LF4 Pdcd10-205ENSMUST00000161137 1927 ntAPPRIS P1 TSL 1 (best) BASIC13.34□□□□□ -0.27
RtcbQ99LF4 Csnk1a1-202ENSMUST00000163205 3204 ntAPPRIS ALT1 TSL 1 (best) BASIC13.34□□□□□ -0.27
RtcbQ99LF4 Frmd4a-202ENSMUST00000091497 6208 ntAPPRIS P3 TSL 1 (best) BASIC13.34□□□□□ -0.27
RtcbQ99LF4 Cpvl-202ENSMUST00000203101 1488 ntTSL 1 (best) BASIC13.34□□□□□ -0.27
RtcbQ99LF4 Ly75-202ENSMUST00000112533 6901 ntAPPRIS ALT2 TSL 5 BASIC13.34□□□□□ -0.27
RtcbQ99LF4 Terb1-201ENSMUST00000064576 2950 ntAPPRIS P1 TSL 1 (best) BASIC13.34□□□□□ -0.27
RtcbQ99LF4 Spock3-203ENSMUST00000118003 2860 ntAPPRIS P3 TSL 5 BASIC13.34□□□□□ -0.27
RtcbQ99LF4 Gm38116-201ENSMUST00000193873 1533 ntBASIC13.34□□□□□ -0.27
RtcbQ99LF4 Prdx2-201ENSMUST00000005292 1500 ntAPPRIS P1 TSL 1 (best) BASIC13.34□□□□□ -0.27
RtcbQ99LF4 Fut4-201ENSMUST00000061498 4074 ntAPPRIS P1 BASIC13.34□□□□□ -0.27
RtcbQ99LF4 Nono-201ENSMUST00000033673 2562 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.27
RtcbQ99LF4 Pnmal2-201ENSMUST00000094807 4147 ntAPPRIS P1 BASIC13.33□□□□□ -0.27
RtcbQ99LF4 Zfp64-201ENSMUST00000087971 2438 ntTSL 1 (best) BASIC13.33□□□□□ -0.27
RtcbQ99LF4 Pla2g4b-201ENSMUST00000126150 2790 ntAPPRIS P1 TSL 5 BASIC13.33□□□□□ -0.27
RtcbQ99LF4 Npr2-202ENSMUST00000107874 3480 ntTSL 5 BASIC13.33□□□□□ -0.27
RtcbQ99LF4 Bcl2l2-203ENSMUST00000133397 3813 ntTSL 1 (best) BASIC13.33□□□□□ -0.27
RtcbQ99LF4 Gm37422-201ENSMUST00000193794 4718 ntBASIC13.33□□□□□ -0.28
RtcbQ99LF4 Atp5g1-201ENSMUST00000090541 4715 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.28
RtcbQ99LF4 Rin3-201ENSMUST00000056950 3892 ntAPPRIS P3 TSL 1 (best) BASIC13.33□□□□□ -0.28
RtcbQ99LF4 Lmna-201ENSMUST00000029699 3156 ntAPPRIS P3 TSL 1 (best) BASIC13.33□□□□□ -0.28
RtcbQ99LF4 Arl8b-201ENSMUST00000032196 4443 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.28
RtcbQ99LF4 Rack1-201ENSMUST00000020640 1447 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.28
RtcbQ99LF4 Dnajc13-201ENSMUST00000035170 8012 ntAPPRIS P1 TSL 5 BASIC13.33□□□□□ -0.28
RtcbQ99LF4 Armcx1-201ENSMUST00000035748 2303 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.28
RtcbQ99LF4 Mybpc3-202ENSMUST00000137942 4134 ntAPPRIS ALT2 TSL 5 BASIC13.33□□□□□ -0.28
RtcbQ99LF4 Zfp532-202ENSMUST00000169679 5003 ntTSL 5 BASIC13.33□□□□□ -0.28
RtcbQ99LF4 Trappc9-204ENSMUST00000170633 4688 ntAPPRIS ALT2 TSL 1 (best) BASIC13.33□□□□□ -0.28
RtcbQ99LF4 Hs6st2-201ENSMUST00000088172 4318 ntTSL 1 (best) BASIC13.33□□□□□ -0.28
RtcbQ99LF4 Slc52a2-201ENSMUST00000023220 2700 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.28
RtcbQ99LF4 Vsig10l-201ENSMUST00000107977 3836 ntAPPRIS ALT2 TSL 5 BASIC13.33□□□□□ -0.28
RtcbQ99LF4 Gm3404-201ENSMUST00000110596 1130 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.28
RtcbQ99LF4 Gm16518-201ENSMUST00000117960 508 ntBASIC13.33□□□□□ -0.28
RtcbQ99LF4 Gm16587-201ENSMUST00000161943 863 ntTSL 1 (best) BASIC13.33□□□□□ -0.28
RtcbQ99LF4 Gm5501-201ENSMUST00000165917 832 ntBASIC13.33□□□□□ -0.28
RtcbQ99LF4 Sectm1b-206ENSMUST00000168459 1075 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.28
RtcbQ99LF4 Gm17797-201ENSMUST00000182175 997 ntBASIC13.33□□□□□ -0.28
RtcbQ99LF4 Gm18122-201ENSMUST00000211390 904 ntBASIC13.33□□□□□ -0.28
RtcbQ99LF4 Gm25125-201ENSMUST00000083340 136 ntBASIC13.33□□□□□ -0.28
RtcbQ99LF4 AC122811.1-201ENSMUST00000222257 2921 ntBASIC13.33□□□□□ -0.28
RtcbQ99LF4 Insrr-201ENSMUST00000029711 5102 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.28
RtcbQ99LF4 Ncan-201ENSMUST00000002412 7195 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.28
RtcbQ99LF4 Accsl-201ENSMUST00000099690 2224 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.28
RtcbQ99LF4 Acsl4-201ENSMUST00000033634 5280 ntTSL 1 (best) BASIC13.33□□□□□ -0.28
RtcbQ99LF4 Slc37a4-201ENSMUST00000165839 2086 ntAPPRIS P2 TSL 1 (best) BASIC13.33□□□□□ -0.28
RtcbQ99LF4 Mmp28-202ENSMUST00000103209 3438 ntAPPRIS ALT2 TSL 1 (best) BASIC13.33□□□□□ -0.28
RtcbQ99LF4 Phc1-204ENSMUST00000159252 3744 ntAPPRIS ALT2 TSL 5 BASIC13.33□□□□□ -0.28
RtcbQ99LF4 Brd3-210ENSMUST00000164296 2791 ntAPPRIS P3 TSL 5 BASIC13.32□□□□□ -0.28
RtcbQ99LF4 Kif1a-203ENSMUST00000171556 5391 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
RtcbQ99LF4 Nr1h4-203ENSMUST00000105297 2013 ntTSL 1 (best) BASIC13.32□□□□□ -0.28
RtcbQ99LF4 Anxa11-202ENSMUST00000112364 1625 ntTSL 1 (best) BASIC13.32□□□□□ -0.28
RtcbQ99LF4 Rragd-202ENSMUST00000084747 4295 ntTSL 5 BASIC13.32□□□□□ -0.28
RtcbQ99LF4 Rev3l-201ENSMUST00000019986 10713 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
RtcbQ99LF4 Scn5a-201ENSMUST00000065196 8287 ntAPPRIS ALT1 TSL 5 BASIC13.32□□□□□ -0.28
RtcbQ99LF4 Pigo-201ENSMUST00000067481 3525 ntAPPRIS ALT2 TSL 5 BASIC13.32□□□□□ -0.28
RtcbQ99LF4 Lig1-210ENSMUST00000165964 3166 ntAPPRIS P1 TSL 5 BASIC13.32□□□□□ -0.28
RtcbQ99LF4 Spaca9-201ENSMUST00000102877 671 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
RtcbQ99LF4 Ighv5-15-201ENSMUST00000103457 350 ntAPPRIS ALT2 BASIC13.32□□□□□ -0.28
RtcbQ99LF4 Lyrm1-204ENSMUST00000106518 875 ntAPPRIS P1 TSL 3 BASIC13.32□□□□□ -0.28
RtcbQ99LF4 Tomm5-203ENSMUST00000107809 738 ntTSL 3 BASIC13.32□□□□□ -0.28
RtcbQ99LF4 Capns1-202ENSMUST00000108196 1192 ntAPPRIS ALT2 TSL 1 (best) BASIC13.32□□□□□ -0.28
RtcbQ99LF4 Wfdc2-203ENSMUST00000109345 558 ntAPPRIS ALT2 TSL 3 BASIC13.32□□□□□ -0.28
RtcbQ99LF4 Snrnp27-201ENSMUST00000001186 885 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
RtcbQ99LF4 Gm8864-201ENSMUST00000118653 1010 ntBASIC13.32□□□□□ -0.28
RtcbQ99LF4 Gm14650-201ENSMUST00000120400 889 ntBASIC13.32□□□□□ -0.28
RtcbQ99LF4 Gm44805-201ENSMUST00000127648 765 ntAPPRIS P1 TSL 5 BASIC13.32□□□□□ -0.28
Retrieved 100 of 76,532 protein–RNA pairs in 56.9 ms