Protein–RNA interactions for Protein: Q8C2A2

Tsen54, tRNA-splicing endonuclease subunit Sen54, mousemouse

Predictions only

Length 525 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Tsen54Q8C2A2 Gm13035-201ENSMUST00000117496 342 ntBASIC9.04□□□□□ -0.96
Tsen54Q8C2A2 Gm15515-201ENSMUST00000117827 822 ntBASIC9.04□□□□□ -0.96
Tsen54Q8C2A2 Rpsa-ps12-201ENSMUST00000120596 892 ntBASIC9.04□□□□□ -0.96
Tsen54Q8C2A2 Pabpc1l2a-ps-201ENSMUST00000128361 513 ntBASIC9.04□□□□□ -0.96
Tsen54Q8C2A2 Platr29-201ENSMUST00000130022 830 ntTSL 5 BASIC9.04□□□□□ -0.96
Tsen54Q8C2A2 Prdx5-203ENSMUST00000149261 755 ntAPPRIS ALT2 TSL 2 BASIC9.04□□□□□ -0.96
Tsen54Q8C2A2 Ubl5-206ENSMUST00000161486 794 ntTSL 2 BASIC9.04□□□□□ -0.96
Tsen54Q8C2A2 Gm38304-201ENSMUST00000161826 600 ntTSL 3 BASIC9.04□□□□□ -0.96
Tsen54Q8C2A2 Apoe-208ENSMUST00000174191 472 ntTSL 2 BASIC9.04□□□□□ -0.96
Tsen54Q8C2A2 Mir5120-201ENSMUST00000175020 78 ntBASIC9.04□□□□□ -0.96
Tsen54Q8C2A2 Hcfc1r1-203ENSMUST00000180140 693 ntAPPRIS P2 TSL 2 BASIC9.04□□□□□ -0.96
Tsen54Q8C2A2 Gm5732-201ENSMUST00000182596 1007 ntBASIC9.04□□□□□ -0.96
Tsen54Q8C2A2 2010010A06Rik-201ENSMUST00000185628 258 ntBASIC9.04□□□□□ -0.96
Tsen54Q8C2A2 Tnfrsf19-203ENSMUST00000224371 1239 ntAPPRIS ALT2 BASIC9.04□□□□□ -0.96
Tsen54Q8C2A2 AC151275.1-201ENSMUST00000224870 585 ntBASIC9.04□□□□□ -0.96
Tsen54Q8C2A2 Lcn8-201ENSMUST00000038482 651 ntAPPRIS P1 TSL 1 (best) BASIC9.04□□□□□ -0.96
Tsen54Q8C2A2 Krtap19-1-201ENSMUST00000081334 493 ntAPPRIS P1 BASIC9.04□□□□□ -0.96
Tsen54Q8C2A2 Gm10288-201ENSMUST00000084614 537 ntBASIC9.04□□□□□ -0.96
Tsen54Q8C2A2 Pigk-204ENSMUST00000159899 4737 ntAPPRIS P1 TSL 1 (best) BASIC9.04□□□□□ -0.96
Tsen54Q8C2A2 Acmsd-201ENSMUST00000038006 2717 ntAPPRIS P1 TSL 1 (best) BASIC9.04□□□□□ -0.96
Tsen54Q8C2A2 5730405O15Rik-201ENSMUST00000127521 1749 ntTSL 2 BASIC9.04□□□□□ -0.96
Tsen54Q8C2A2 Zim1-203ENSMUST00000203908 1740 ntAPPRIS P1 TSL 5 BASIC9.04□□□□□ -0.96
Tsen54Q8C2A2 Adck1-201ENSMUST00000101165 2158 ntAPPRIS P1 TSL 1 (best) BASIC9.04□□□□□ -0.96
Tsen54Q8C2A2 Epb41-204ENSMUST00000105970 5059 ntAPPRIS ALT2 TSL 5 BASIC9.04□□□□□ -0.96
Tsen54Q8C2A2 Gm37307-201ENSMUST00000193663 2621 ntBASIC9.04□□□□□ -0.96
Tsen54Q8C2A2 Sh2d3c-201ENSMUST00000074248 3092 ntTSL 1 (best) BASIC9.04□□□□□ -0.96
Tsen54Q8C2A2 Usp45-201ENSMUST00000040429 5861 ntAPPRIS ALT2 TSL 1 (best) BASIC9.04□□□□□ -0.96
Tsen54Q8C2A2 Slamf7-204ENSMUST00000194531 1604 ntAPPRIS ALT2 TSL 1 (best) BASIC9.04□□□□□ -0.96
Tsen54Q8C2A2 Slc39a14-210ENSMUST00000152067 2075 ntAPPRIS ALT2 TSL 1 (best) BASIC9.04□□□□□ -0.96
Tsen54Q8C2A2 Epb41l4a-201ENSMUST00000025234 3853 ntAPPRIS P1 TSL 1 (best) BASIC9.04□□□□□ -0.96
Tsen54Q8C2A2 Ncapd3-202ENSMUST00000086198 4675 ntAPPRIS ALT2 TSL 1 (best) BASIC9.04□□□□□ -0.96
Tsen54Q8C2A2 Atp13a4-201ENSMUST00000039090 2878 ntTSL 1 (best) BASIC9.04□□□□□ -0.96
Tsen54Q8C2A2 Nek5-201ENSMUST00000169834 2404 ntAPPRIS P3 TSL 1 (best) BASIC9.04□□□□□ -0.96
Tsen54Q8C2A2 Zzef1-207ENSMUST00000172220 11249 ntAPPRIS ALT2 TSL 5 BASIC9.04□□□□□ -0.96
Tsen54Q8C2A2 Tubd1-203ENSMUST00000108030 1964 ntTSL 1 (best) BASIC9.04□□□□□ -0.96
Tsen54Q8C2A2 Gm20125-205ENSMUST00000208005 1979 ntTSL 5 BASIC9.04□□□□□ -0.96
Tsen54Q8C2A2 Aebp2-201ENSMUST00000032359 5932 ntAPPRIS ALT2 TSL 1 (best) BASIC9.04□□□□□ -0.96
Tsen54Q8C2A2 AU022252-203ENSMUST00000141112 7151 ntAPPRIS P1 TSL 1 (best) BASIC9.04□□□□□ -0.96
Tsen54Q8C2A2 Polr2a-201ENSMUST00000058470 6740 ntAPPRIS P1 TSL 1 (best) BASIC9.04□□□□□ -0.96
Tsen54Q8C2A2 Pcgf2-202ENSMUST00000103148 1438 ntAPPRIS P1 TSL 5 BASIC9.04□□□□□ -0.96
Tsen54Q8C2A2 Tnc-204ENSMUST00000107377 7100 ntAPPRIS P2 TSL 1 (best) BASIC9.04□□□□□ -0.96
Tsen54Q8C2A2 Cyp2c53-ps-203ENSMUST00000176493 1443 ntTSL 1 (best) BASIC9.04□□□□□ -0.96
Tsen54Q8C2A2 Rbpsuh-rs3-201ENSMUST00000182751 1441 ntBASIC9.04□□□□□ -0.96
Tsen54Q8C2A2 Fgd4-204ENSMUST00000161188 2214 ntTSL 2 BASIC9.04□□□□□ -0.96
Tsen54Q8C2A2 Slc34a2-201ENSMUST00000094787 4176 ntAPPRIS P1 TSL 1 (best) BASIC9.04□□□□□ -0.96
Tsen54Q8C2A2 Gm14565-201ENSMUST00000140021 2494 ntTSL 1 (best) BASIC9.04□□□□□ -0.96
Tsen54Q8C2A2 Olfr1349-204ENSMUST00000207820 1325 ntAPPRIS P1 TSL 3 BASIC9.04□□□□□ -0.96
Tsen54Q8C2A2 Zfp324-201ENSMUST00000038701 4315 ntAPPRIS P1 TSL 1 (best) BASIC9.04□□□□□ -0.96
Tsen54Q8C2A2 Cd247-206ENSMUST00000161971 2713 ntTSL 1 (best) BASIC9.03□□□□□ -0.96
Tsen54Q8C2A2 Sfi1-218ENSMUST00000153425 3759 ntAPPRIS ALT2 TSL 5 BASIC9.03□□□□□ -0.96
Tsen54Q8C2A2 Trim9-205ENSMUST00000221041 3767 ntTSL 1 (best) BASIC9.03□□□□□ -0.96
Tsen54Q8C2A2 Ampd2-203ENSMUST00000102638 3650 ntAPPRIS P3 TSL 1 (best) BASIC9.03□□□□□ -0.96
Tsen54Q8C2A2 Cyp51-201ENSMUST00000001507 3931 ntAPPRIS P1 TSL 1 (best) BASIC9.03□□□□□ -0.96
Tsen54Q8C2A2 Gm38054-201ENSMUST00000192380 2167 ntTSL 1 (best) BASIC9.03□□□□□ -0.96
Tsen54Q8C2A2 Clec10a-201ENSMUST00000000327 1454 ntAPPRIS ALT2 TSL 1 (best) BASIC9.03□□□□□ -0.96
Tsen54Q8C2A2 Plekha6-201ENSMUST00000038295 7388 ntTSL 1 (best) BASIC9.03□□□□□ -0.96
Tsen54Q8C2A2 Pde4b-203ENSMUST00000097950 2756 ntTSL 1 (best) BASIC9.03□□□□□ -0.96
Tsen54Q8C2A2 Fbxo39-201ENSMUST00000108504 1708 ntAPPRIS P1 TSL 5 BASIC9.03□□□□□ -0.96
Tsen54Q8C2A2 Raf1-202ENSMUST00000112949 2946 ntAPPRIS P1 TSL 1 (best) BASIC9.03□□□□□ -0.96
Tsen54Q8C2A2 Map7d2-202ENSMUST00000112470 1350 ntTSL 1 (best) BASIC9.03□□□□□ -0.96
Tsen54Q8C2A2 Ptbp3-202ENSMUST00000102883 3409 ntAPPRIS P4 TSL 1 (best) BASIC9.03□□□□□ -0.96
Tsen54Q8C2A2 Hmgb1-201ENSMUST00000085546 2838 ntAPPRIS P1 TSL 1 (best) BASIC9.03□□□□□ -0.96
Tsen54Q8C2A2 Gabra5-203ENSMUST00000206734 2224 ntAPPRIS P1 TSL 1 (best) BASIC9.03□□□□□ -0.96
Tsen54Q8C2A2 AC117656.2-201ENSMUST00000224931 2215 ntBASIC9.03□□□□□ -0.96
Tsen54Q8C2A2 Gm10634-202ENSMUST00000188891 2464 ntTSL 1 (best) BASIC9.03□□□□□ -0.96
Tsen54Q8C2A2 Itgal-203ENSMUST00000118405 3909 ntTSL 1 (best) BASIC9.03□□□□□ -0.96
Tsen54Q8C2A2 Zzef1-201ENSMUST00000069395 11150 ntAPPRIS P2 TSL 5 BASIC9.03□□□□□ -0.96
Tsen54Q8C2A2 Umodl1-203ENSMUST00000114555 5041 ntAPPRIS P2 TSL 5 BASIC9.03□□□□□ -0.96
Tsen54Q8C2A2 Gngt2-207ENSMUST00000107714 558 ntAPPRIS P1 TSL 3 BASIC9.03□□□□□ -0.96
Tsen54Q8C2A2 Serf2-202ENSMUST00000110615 876 ntTSL 2 BASIC9.03□□□□□ -0.96
Tsen54Q8C2A2 Gm14058-201ENSMUST00000116082 735 ntBASIC9.03□□□□□ -0.96
Tsen54Q8C2A2 Gm15207-201ENSMUST00000119259 442 ntBASIC9.03□□□□□ -0.96
Tsen54Q8C2A2 Gm14396-201ENSMUST00000126966 548 ntTSL 1 (best) BASIC9.03□□□□□ -0.96
Tsen54Q8C2A2 Arid3b-204ENSMUST00000164010 1259 ntTSL 5 BASIC9.03□□□□□ -0.96
Tsen54Q8C2A2 Rn7s1-201ENSMUST00000174924 300 ntBASIC9.03□□□□□ -0.96
Tsen54Q8C2A2 Rn7s2-201ENSMUST00000175032 300 ntBASIC9.03□□□□□ -0.96
Tsen54Q8C2A2 Gm26461-201ENSMUST00000175064 290 ntBASIC9.03□□□□□ -0.96
Tsen54Q8C2A2 3110045C21Rik-201ENSMUST00000180638 1135 ntTSL 1 (best) BASIC9.03□□□□□ -0.96
Tsen54Q8C2A2 Gm28287-201ENSMUST00000186612 546 ntTSL 5 BASIC9.03□□□□□ -0.96
Tsen54Q8C2A2 Ighv1-48-201ENSMUST00000191795 294 ntBASIC9.03□□□□□ -0.96
Tsen54Q8C2A2 Gm37933-201ENSMUST00000193964 981 ntTSL 1 (best) BASIC9.03□□□□□ -0.96
Tsen54Q8C2A2 Gm6450-201ENSMUST00000200896 574 ntBASIC9.03□□□□□ -0.96
Tsen54Q8C2A2 Gm44136-201ENSMUST00000203819 1106 ntBASIC9.03□□□□□ -0.96
Tsen54Q8C2A2 Olfr1380-201ENSMUST00000204300 938 ntAPPRIS P1 BASIC9.03□□□□□ -0.96
Tsen54Q8C2A2 Gm44008-201ENSMUST00000204345 412 ntBASIC9.03□□□□□ -0.96
Tsen54Q8C2A2 AC113082.1-201ENSMUST00000217324 327 ntBASIC9.03□□□□□ -0.96
Tsen54Q8C2A2 Ly6g5c-201ENSMUST00000037849 509 ntAPPRIS P1 TSL 1 (best) BASIC9.03□□□□□ -0.96
Tsen54Q8C2A2 Stard13-201ENSMUST00000062015 5526 ntAPPRIS ALT2 TSL 1 (best) BASIC9.03□□□□□ -0.96
Tsen54Q8C2A2 Rpl9-ps6-201ENSMUST00000078034 691 ntAPPRIS P1 BASIC9.03□□□□□ -0.96
Tsen54Q8C2A2 Zscan21-202ENSMUST00000080732 2134 ntAPPRIS P1 TSL 1 (best) BASIC9.03□□□□□ -0.96
Tsen54Q8C2A2 Trpm1-221ENSMUST00000206706 2350 ntTSL 1 (best) BASIC9.03□□□□□ -0.96
Tsen54Q8C2A2 4930539E08Rik-201ENSMUST00000062357 4597 ntAPPRIS P1 TSL 1 (best) BASIC9.03□□□□□ -0.96
Tsen54Q8C2A2 Rreb1-207ENSMUST00000128570 8436 ntAPPRIS P1 TSL 5 BASIC9.03□□□□□ -0.96
Tsen54Q8C2A2 Eea1-201ENSMUST00000053484 7749 ntAPPRIS P1 TSL 1 (best) BASIC9.03□□□□□ -0.96
Tsen54Q8C2A2 Smpd4-218ENSMUST00000170273 2166 ntTSL 5 BASIC9.03□□□□□ -0.96
Tsen54Q8C2A2 Gtf2h3-201ENSMUST00000031333 2672 ntAPPRIS P1 TSL 1 (best) BASIC9.03□□□□□ -0.96
Tsen54Q8C2A2 Dspp-201ENSMUST00000112771 4431 ntAPPRIS P1 TSL 1 (best) BASIC9.03□□□□□ -0.96
Tsen54Q8C2A2 Tceanc-202ENSMUST00000112188 4050 ntAPPRIS P1 TSL 1 (best) BASIC9.03□□□□□ -0.96
Tsen54Q8C2A2 Zfp111-202ENSMUST00000073833 3079 ntAPPRIS P3 TSL 5 BASIC9.03□□□□□ -0.96
Tsen54Q8C2A2 Gm45867-201ENSMUST00000208201 2317 ntBASIC9.03□□□□□ -0.96
Retrieved 100 of 76,532 protein–RNA pairs in 77.8 ms