Protein–RNA interactions for Protein: Q60769

Tnfaip3, Tumor necrosis factor alpha-induced protein 3, mousemouse

Predictions only

Length 775 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Tnfaip3Q60769 Gm38901-201ENSMUST00000202448 3008 ntTSL 1 (best) BASIC10.24□□□□□ -0.77
Tnfaip3Q60769 Vipr2-201ENSMUST00000011315 3383 ntAPPRIS P1 TSL 1 (best) BASIC10.24□□□□□ -0.77
Tnfaip3Q60769 Zfp608-201ENSMUST00000064763 6112 ntAPPRIS P1 TSL 1 (best) BASIC10.24□□□□□ -0.77
Tnfaip3Q60769 Igf1-207ENSMUST00000122386 1391 ntAPPRIS P1 TSL 1 (best) BASIC10.24□□□□□ -0.77
Tnfaip3Q60769 Gm19445-201ENSMUST00000193649 2438 ntBASIC10.24□□□□□ -0.77
Tnfaip3Q60769 Usp44-202ENSMUST00000216224 2449 ntAPPRIS P1 TSL 5 BASIC10.24□□□□□ -0.77
Tnfaip3Q60769 Dab2-203ENSMUST00000110663 2754 ntAPPRIS ALT2 TSL 1 (best) BASIC10.24□□□□□ -0.77
Tnfaip3Q60769 Magi1-203ENSMUST00000093769 4598 ntTSL 1 (best) BASIC10.24□□□□□ -0.77
Tnfaip3Q60769 Sh3gl2-201ENSMUST00000030212 2822 ntAPPRIS P1 TSL 1 (best) BASIC10.24□□□□□ -0.77
Tnfaip3Q60769 Chmp1b-202ENSMUST00000210564 2490 ntAPPRIS P1 BASIC10.24□□□□□ -0.77
Tnfaip3Q60769 Arhgap15os-201ENSMUST00000139948 1761 ntTSL 1 (best) BASIC10.24□□□□□ -0.77
Tnfaip3Q60769 Gm8020-201ENSMUST00000170174 1406 ntAPPRIS P1 TSL 5 BASIC10.24□□□□□ -0.77
Tnfaip3Q60769 Zfp462-202ENSMUST00000079605 4684 ntAPPRIS ALT2 TSL 5 BASIC10.24□□□□□ -0.77
Tnfaip3Q60769 Iqgap3-201ENSMUST00000071812 5756 ntAPPRIS P1 TSL 1 (best) BASIC10.24□□□□□ -0.77
Tnfaip3Q60769 Gm20755-201ENSMUST00000196893 1827 ntTSL 1 (best) BASIC10.23□□□□□ -0.77
Tnfaip3Q60769 Gm45828-201ENSMUST00000206938 1836 ntBASIC10.23□□□□□ -0.77
Tnfaip3Q60769 Snx13-202ENSMUST00000163677 3681 ntTSL 1 (best) BASIC10.23□□□□□ -0.77
Tnfaip3Q60769 March1-207ENSMUST00000110258 2581 ntAPPRIS ALT1 TSL 5 BASIC10.23□□□□□ -0.77
Tnfaip3Q60769 Slc25a51-201ENSMUST00000107796 4433 ntTSL 1 (best) BASIC10.23□□□□□ -0.77
Tnfaip3Q60769 Polr1e-203ENSMUST00000107814 1470 ntAPPRIS ALT2 TSL 1 (best) BASIC10.23□□□□□ -0.77
Tnfaip3Q60769 4930558J22Rik-201ENSMUST00000139822 1480 ntTSL 1 (best) BASIC10.23□□□□□ -0.77
Tnfaip3Q60769 1810019N24Rik-201ENSMUST00000181128 1474 ntTSL 1 (best) BASIC10.23□□□□□ -0.77
Tnfaip3Q60769 Smok4a-201ENSMUST00000074512 1455 ntBASIC10.23□□□□□ -0.77
Tnfaip3Q60769 Spg20-203ENSMUST00000117341 2957 ntTSL 1 (best) BASIC10.23□□□□□ -0.77
Tnfaip3Q60769 Rsrc2-202ENSMUST00000057795 2270 ntAPPRIS P1 TSL 5 BASIC10.23□□□□□ -0.77
Tnfaip3Q60769 Furin-201ENSMUST00000107362 4166 ntAPPRIS P1 TSL 5 BASIC10.23□□□□□ -0.77
Tnfaip3Q60769 Rnf144b-201ENSMUST00000068891 4640 ntAPPRIS P1 TSL 1 (best) BASIC10.23□□□□□ -0.77
Tnfaip3Q60769 Col6a4-201ENSMUST00000121963 7371 ntAPPRIS P1 TSL 5 BASIC10.23□□□□□ -0.77
Tnfaip3Q60769 Uaca-201ENSMUST00000050183 4428 ntAPPRIS P2 TSL 1 (best) BASIC10.23□□□□□ -0.77
Tnfaip3Q60769 Acvrl1-201ENSMUST00000000542 3640 ntAPPRIS P1 TSL 1 (best) BASIC10.23□□□□□ -0.77
Tnfaip3Q60769 Olfr1156-202ENSMUST00000216191 3300 ntAPPRIS P1 TSL 5 BASIC10.23□□□□□ -0.77
Tnfaip3Q60769 Tab1-201ENSMUST00000023050 2931 ntAPPRIS P1 TSL 1 (best) BASIC10.23□□□□□ -0.77
Tnfaip3Q60769 Rffl-205ENSMUST00000103218 1264 ntTSL 1 (best) BASIC10.23□□□□□ -0.77
Tnfaip3Q60769 1700071K01Rik-201ENSMUST00000117522 819 ntBASIC10.23□□□□□ -0.77
Tnfaip3Q60769 Gm11380-201ENSMUST00000118067 560 ntBASIC10.23□□□□□ -0.77
Tnfaip3Q60769 Gm13022-201ENSMUST00000121181 285 ntBASIC10.23□□□□□ -0.77
Tnfaip3Q60769 Smim6-201ENSMUST00000132961 978 ntAPPRIS P1 TSL 1 (best) BASIC10.23□□□□□ -0.77
Tnfaip3Q60769 Gm15486-201ENSMUST00000135147 604 ntTSL 3 BASIC10.23□□□□□ -0.77
Tnfaip3Q60769 4930571N24Rik-202ENSMUST00000142914 598 ntTSL 1 (best) BASIC10.23□□□□□ -0.77
Tnfaip3Q60769 Gm16081-201ENSMUST00000155992 684 ntTSL 3 BASIC10.23□□□□□ -0.77
Tnfaip3Q60769 Gas5-224ENSMUST00000162558 502 ntTSL 1 (best) BASIC10.23□□□□□ -0.77
Tnfaip3Q60769 Gm9372-201ENSMUST00000168454 430 ntBASIC10.23□□□□□ -0.77
Tnfaip3Q60769 Ighv1-76-201ENSMUST00000169155 294 ntAPPRIS P1 BASIC10.23□□□□□ -0.77
Tnfaip3Q60769 Ighv1-62-1-202ENSMUST00000171270 90 ntAPPRIS P1 BASIC10.23□□□□□ -0.77
Tnfaip3Q60769 Mipep-ps-201ENSMUST00000177439 291 ntBASIC10.23□□□□□ -0.77
Tnfaip3Q60769 Gm26918-201ENSMUST00000182496 728 ntTSL 2 BASIC10.23□□□□□ -0.77
Tnfaip3Q60769 1700017I07Rik-201ENSMUST00000184823 462 ntTSL 1 (best) BASIC10.23□□□□□ -0.77
Tnfaip3Q60769 Gm42588-201ENSMUST00000200538 1297 ntBASIC10.23□□□□□ -0.77
Tnfaip3Q60769 4930478P22Rik-202ENSMUST00000201921 723 ntTSL 3 BASIC10.23□□□□□ -0.77
Tnfaip3Q60769 Gm33080-201ENSMUST00000205429 172 ntBASIC10.23□□□□□ -0.77
Tnfaip3Q60769 Isoc2b-205ENSMUST00000208816 820 ntAPPRIS P1 TSL 3 BASIC10.23□□□□□ -0.77
Tnfaip3Q60769 E230014E18Rik-201ENSMUST00000215920 859 ntTSL 1 (best) BASIC10.23□□□□□ -0.77
Tnfaip3Q60769 Gm9487-201ENSMUST00000216600 472 ntBASIC10.23□□□□□ -0.77
Tnfaip3Q60769 AC113282.2-201ENSMUST00000224012 945 ntAPPRIS P1 BASIC10.23□□□□□ -0.77
Tnfaip3Q60769 AC113282.3-201ENSMUST00000224757 942 ntAPPRIS P1 BASIC10.23□□□□□ -0.77
Tnfaip3Q60769 AC130477.1-201ENSMUST00000226982 420 ntBASIC10.23□□□□□ -0.77
Tnfaip3Q60769 Gm4604-201ENSMUST00000025040 390 ntBASIC10.23□□□□□ -0.77
Tnfaip3Q60769 Crot-201ENSMUST00000003720 2996 ntAPPRIS P1 TSL 1 (best) BASIC10.23□□□□□ -0.77
Tnfaip3Q60769 1700029P11Rik-201ENSMUST00000074608 1024 ntAPPRIS P1 BASIC10.23□□□□□ -0.77
Tnfaip3Q60769 Olfr525-201ENSMUST00000078103 1050 ntAPPRIS P1 BASIC10.23□□□□□ -0.77
Tnfaip3Q60769 Acyp1-201ENSMUST00000008966 648 ntAPPRIS P1 TSL 1 (best) BASIC10.23□□□□□ -0.77
Tnfaip3Q60769 Wfdc8-202ENSMUST00000109338 1794 ntAPPRIS P3 TSL 1 (best) BASIC10.23□□□□□ -0.77
Tnfaip3Q60769 Kdelc1-201ENSMUST00000027213 1765 ntTSL 1 (best) BASIC10.23□□□□□ -0.77
Tnfaip3Q60769 Cd93-201ENSMUST00000099269 6677 ntAPPRIS P1 TSL 1 (best) BASIC10.23□□□□□ -0.77
Tnfaip3Q60769 Dph6-203ENSMUST00000102542 2734 ntAPPRIS P1 TSL 1 (best) BASIC10.23□□□□□ -0.77
Tnfaip3Q60769 Dnmt3aos-201ENSMUST00000144896 1385 ntTSL 2 BASIC10.23□□□□□ -0.77
Tnfaip3Q60769 Gm43720-201ENSMUST00000159067 6411 ntAPPRIS P1 TSL 5 BASIC10.23□□□□□ -0.77
Tnfaip3Q60769 Plekhg4-206ENSMUST00000214056 3654 ntAPPRIS ALT2 TSL 5 BASIC10.23□□□□□ -0.77
Tnfaip3Q60769 Sfxn2-201ENSMUST00000026011 3210 ntAPPRIS P1 TSL 1 (best) BASIC10.23□□□□□ -0.77
Tnfaip3Q60769 Ss18l2-206ENSMUST00000215966 2316 ntTSL 1 (best) BASIC10.23□□□□□ -0.77
Tnfaip3Q60769 Exoc4-203ENSMUST00000115080 2369 ntTSL 1 (best) BASIC10.23□□□□□ -0.77
Tnfaip3Q60769 Tubb1-201ENSMUST00000016399 1406 ntAPPRIS P1 TSL 1 (best) BASIC10.23□□□□□ -0.77
Tnfaip3Q60769 Gm44056-201ENSMUST00000204623 1427 ntBASIC10.23□□□□□ -0.77
Tnfaip3Q60769 Tacc2-217ENSMUST00000209108 3310 ntTSL 1 (best) BASIC10.23□□□□□ -0.77
Tnfaip3Q60769 Zfp1-202ENSMUST00000211926 1409 ntAPPRIS ALT2 TSL 1 (best) BASIC10.23□□□□□ -0.77
Tnfaip3Q60769 Slc38a4-202ENSMUST00000166223 1908 ntAPPRIS P1 TSL 1 (best) BASIC10.23□□□□□ -0.77
Tnfaip3Q60769 D830039M14Rik-202ENSMUST00000217740 3362 ntBASIC10.23□□□□□ -0.77
Tnfaip3Q60769 Mx2-202ENSMUST00000188251 2421 ntTSL 1 (best) BASIC10.23□□□□□ -0.77
Tnfaip3Q60769 Gm15784-201ENSMUST00000120260 1462 ntBASIC10.23□□□□□ -0.77
Tnfaip3Q60769 Pdgfrb-201ENSMUST00000025522 5407 ntAPPRIS P2 TSL 1 (best) BASIC10.23□□□□□ -0.77
Tnfaip3Q60769 Cntn4-203ENSMUST00000113258 2464 ntTSL 1 (best) BASIC10.23□□□□□ -0.77
Tnfaip3Q60769 Csgalnact1-203ENSMUST00000130214 3029 ntAPPRIS P1 TSL 1 (best) BASIC10.23□□□□□ -0.77
Tnfaip3Q60769 Gm45089-201ENSMUST00000208082 2040 ntBASIC10.23□□□□□ -0.77
Tnfaip3Q60769 Clec12b-201ENSMUST00000032261 1521 ntAPPRIS P1 TSL 1 (best) BASIC10.23□□□□□ -0.77
Tnfaip3Q60769 Dpysl4-201ENSMUST00000026551 3552 ntAPPRIS P1 TSL 1 (best) BASIC10.23□□□□□ -0.77
Tnfaip3Q60769 Gm15958-202ENSMUST00000153479 2087 ntTSL 1 (best) BASIC10.22□□□□□ -0.77
Tnfaip3Q60769 Dhdds-201ENSMUST00000012262 3133 ntAPPRIS P2 TSL 1 (best) BASIC10.22□□□□□ -0.77
Tnfaip3Q60769 Atp6v1d-201ENSMUST00000021536 3667 ntAPPRIS P1 TSL 1 (best) BASIC10.22□□□□□ -0.77
Tnfaip3Q60769 Trpc6-203ENSMUST00000217462 3168 ntTSL 1 (best) BASIC10.22□□□□□ -0.77
Tnfaip3Q60769 Pla2g5-201ENSMUST00000030524 2131 ntAPPRIS P1 TSL 1 (best) BASIC10.22□□□□□ -0.77
Tnfaip3Q60769 Gm44369-201ENSMUST00000204543 2175 ntBASIC10.22□□□□□ -0.77
Tnfaip3Q60769 Olfr223-202ENSMUST00000215626 1695 ntAPPRIS P1 TSL 5 BASIC10.22□□□□□ -0.77
Tnfaip3Q60769 Sec24d-201ENSMUST00000047923 3903 ntAPPRIS P1 TSL 1 (best) BASIC10.22□□□□□ -0.77
Tnfaip3Q60769 Clcn4-201ENSMUST00000000619 4607 ntAPPRIS P3 TSL 1 (best) BASIC10.22□□□□□ -0.77
Tnfaip3Q60769 Chd7-206ENSMUST00000170391 3462 ntTSL 5 BASIC10.22□□□□□ -0.77
Tnfaip3Q60769 Myh13-201ENSMUST00000081911 5817 ntAPPRIS P1 TSL 5 BASIC10.22□□□□□ -0.77
Tnfaip3Q60769 Akap12-201ENSMUST00000045730 6195 ntAPPRIS P2 TSL 1 (best) BASIC10.22□□□□□ -0.77
Tnfaip3Q60769 Gm32856-201ENSMUST00000212145 3767 ntTSL 1 (best) BASIC10.22□□□□□ -0.77
Tnfaip3Q60769 Ctcfl-202ENSMUST00000179693 3174 ntAPPRIS P1 TSL 5 BASIC10.22□□□□□ -0.77
Tnfaip3Q60769 Gm14993-201ENSMUST00000121180 164 ntBASIC10.22□□□□□ -0.77
Retrieved 100 of 76,532 protein–RNA pairs in 43 ms