Protein–RNA interactions for Protein: Q5UIP0

RIF1, Telomere-associated protein RIF1, humanhuman

Known RBP Predictions only

Length 2,472 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RIF1Q5UIP0 GPRC5B-209ENST00000569479 2984 ntAPPRIS P2 TSL 5 BASIC13.3□□□□□ -0.28
RIF1Q5UIP0 ADPRHL1-201ENST00000356501 1877 ntTSL 1 (best) BASIC13.3□□□□□ -0.28
RIF1Q5UIP0 DCAF17-211ENST00000539783 5623 ntAPPRIS ALT2 TSL 5 BASIC13.3□□□□□ -0.28
RIF1Q5UIP0 GABRB3-219ENST00000636466 4509 ntTSL 5 BASIC13.3□□□□□ -0.28
RIF1Q5UIP0 DBH-AS1-201ENST00000425189 2139 ntTSL 1 (best) BASIC13.3□□□□□ -0.28
RIF1Q5UIP0 PXK-210ENST00000479241 2817 ntTSL 2 BASIC13.3□□□□□ -0.28
RIF1Q5UIP0 AC131212.3-201ENST00000624087 4219 ntBASIC13.3□□□□□ -0.28
RIF1Q5UIP0 INSC-208ENST00000530161 1702 ntAPPRIS ALT2 TSL 1 (best) BASIC13.3□□□□□ -0.28
RIF1Q5UIP0 KLC4-202ENST00000347162 2404 ntAPPRIS ALT2 TSL 1 (best) BASIC13.3□□□□□ -0.28
RIF1Q5UIP0 LCN12-202ENST00000371633 579 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
RIF1Q5UIP0 KRTAP12-1-201ENST00000391617 588 ntAPPRIS P1 BASIC13.3□□□□□ -0.28
RIF1Q5UIP0 TXLNGY-202ENST00000407724 1000 ntTSL 3 BASIC13.3□□□□□ -0.28
RIF1Q5UIP0 SSR4P1-201ENST00000415143 412 ntBASIC13.3□□□□□ -0.28
RIF1Q5UIP0 AC098591.1-202ENST00000507914 937 ntBASIC13.3□□□□□ -0.28
RIF1Q5UIP0 AP3M2-205ENST00000517922 1094 ntTSL 2 BASIC13.3□□□□□ -0.28
RIF1Q5UIP0 AL121790.2-201ENST00000553425 379 ntTSL 4 BASIC13.3□□□□□ -0.28
RIF1Q5UIP0 AL031058.1-201ENST00000561592 888 ntBASIC13.3□□□□□ -0.28
RIF1Q5UIP0 AC005154.1-202ENST00000578293 999 ntTSL 5 BASIC13.3□□□□□ -0.28
RIF1Q5UIP0 AC092535.4-201ENST00000609548 397 ntBASIC13.3□□□□□ -0.28
RIF1Q5UIP0 MIR4726-201ENST00000615971 58 ntBASIC13.3□□□□□ -0.28
RIF1Q5UIP0 MSMO1-201ENST00000261507 2269 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
RIF1Q5UIP0 AC007388.1-204ENST00000449569 2517 ntTSL 2 BASIC13.3□□□□□ -0.28
RIF1Q5UIP0 DACT3-AS1-201ENST00000500689 1304 ntTSL 1 (best) BASIC13.3□□□□□ -0.28
RIF1Q5UIP0 TACC3-201ENST00000313288 2781 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
RIF1Q5UIP0 HNRNPF-204ENST00000443950 2755 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
RIF1Q5UIP0 ARHGAP5-205ENST00000433497 3047 ntTSL 1 (best) BASIC13.29□□□□□ -0.28
RIF1Q5UIP0 CAMK2B-217ENST00000457475 4142 ntTSL 5 BASIC13.29□□□□□ -0.28
RIF1Q5UIP0 AC084018.2-201ENST00000613093 2607 ntBASIC13.29□□□□□ -0.28
RIF1Q5UIP0 GPN2-202ENST00000374135 4678 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
RIF1Q5UIP0 KEAP1-201ENST00000171111 2955 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
RIF1Q5UIP0 ELMO3-201ENST00000360833 2480 ntAPPRIS ALT2 TSL 2 BASIC13.29□□□□□ -0.28
RIF1Q5UIP0 ANKRD30B-202ENST00000358984 4359 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
RIF1Q5UIP0 PPP4R1L-201ENST00000244070 1474 ntTSL 1 (best) BASIC13.29□□□□□ -0.28
RIF1Q5UIP0 RNFT2-203ENST00000392549 2896 ntAPPRIS P1 TSL 5 BASIC13.29□□□□□ -0.28
RIF1Q5UIP0 DIDO1-207ENST00000395343 8477 ntAPPRIS ALT2 TSL 1 (best) BASIC13.29□□□□□ -0.28
RIF1Q5UIP0 AC215219.1-201ENST00000400706 1817 ntBASIC13.29□□□□□ -0.28
RIF1Q5UIP0 OR8B8-201ENST00000328064 1033 ntAPPRIS P1 BASIC13.29□□□□□ -0.28
RIF1Q5UIP0 AC103592.1-201ENST00000394513 664 ntBASIC13.29□□□□□ -0.28
RIF1Q5UIP0 MARCKSL1P2-201ENST00000401037 976 ntBASIC13.29□□□□□ -0.28
RIF1Q5UIP0 MLN-202ENST00000430124 566 ntTSL 1 (best) BASIC13.29□□□□□ -0.28
RIF1Q5UIP0 ALKBH2-203ENST00000440112 574 ntTSL 1 (best) BASIC13.29□□□□□ -0.28
RIF1Q5UIP0 H1FOO-202ENST00000503977 881 ntTSL 1 (best) BASIC13.29□□□□□ -0.28
RIF1Q5UIP0 SEMA6A-AS1-206ENST00000514214 782 ntTSL 3 BASIC13.29□□□□□ -0.28
RIF1Q5UIP0 OPRM1-211ENST00000518759 1060 ntTSL 1 (best) BASIC13.29□□□□□ -0.28
RIF1Q5UIP0 SSSCA1-203ENST00000526877 713 ntTSL 3 BASIC13.29□□□□□ -0.28
RIF1Q5UIP0 Z92544.2-202ENST00000566927 407 ntTSL 3 BASIC13.29□□□□□ -0.28
RIF1Q5UIP0 AIPL1-210ENST00000576307 1077 ntTSL 1 (best) BASIC13.29□□□□□ -0.28
RIF1Q5UIP0 KRT18P8-201ENST00000581937 1246 ntBASIC13.29□□□□□ -0.28
RIF1Q5UIP0 SEPT14P19-201ENST00000587432 336 ntTSL 2 BASIC13.29□□□□□ -0.28
RIF1Q5UIP0 IGHD-202ENST00000613640 1155 ntAPPRIS ALT2 TSL 5 BASIC13.29□□□□□ -0.28
RIF1Q5UIP0 OR4C6-202ENST00000641251 1058 ntAPPRIS P1 BASIC13.29□□□□□ -0.28
RIF1Q5UIP0 CTNNBIP1-203ENST00000377263 3000 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
RIF1Q5UIP0 IVL-201ENST00000368764 2153 ntAPPRIS P1 TSL 2 BASIC13.29□□□□□ -0.28
RIF1Q5UIP0 ZPBP2-202ENST00000377940 2177 ntAPPRIS ALT2 TSL 1 (best) BASIC13.29□□□□□ -0.28
RIF1Q5UIP0 NBAT1-201ENST00000566912 1940 ntTSL 2 BASIC13.29□□□□□ -0.28
RIF1Q5UIP0 CANT1-211ENST00000591773 1669 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
RIF1Q5UIP0 MAFB-201ENST00000373313 3393 ntAPPRIS P1 BASIC13.29□□□□□ -0.28
RIF1Q5UIP0 GPR158-AS1-201ENST00000449643 2433 ntTSL 2 BASIC13.29□□□□□ -0.28
RIF1Q5UIP0 NFKB2-203ENST00000369966 3101 ntAPPRIS P4 TSL 1 (best) BASIC13.29□□□□□ -0.28
RIF1Q5UIP0 AC007182.1-201ENST00000455232 2159 ntTSL 1 (best) BASIC13.29□□□□□ -0.28
RIF1Q5UIP0 GFOD1-203ENST00000379287 8751 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
RIF1Q5UIP0 CHIT1-201ENST00000255427 1598 ntTSL 2 BASIC13.29□□□□□ -0.28
RIF1Q5UIP0 GLUL-201ENST00000311223 4719 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
RIF1Q5UIP0 SATB2-206ENST00000457245 2656 ntAPPRIS P1 TSL 2 BASIC13.29□□□□□ -0.28
RIF1Q5UIP0 H6PD-201ENST00000377403 9146 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
RIF1Q5UIP0 FMNL3-205ENST00000550488 4120 ntAPPRIS ALT2 TSL 5 BASIC13.29□□□□□ -0.28
RIF1Q5UIP0 HCFC1-201ENST00000310441 8869 ntAPPRIS P2 TSL 1 (best) BASIC13.29□□□□□ -0.28
RIF1Q5UIP0 EDDM3B-201ENST00000326783 896 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
RIF1Q5UIP0 AL021407.3-201ENST00000407522 486 ntBASIC13.29□□□□□ -0.28
RIF1Q5UIP0 RPL21P135-201ENST00000442539 791 ntBASIC13.29□□□□□ -0.28
RIF1Q5UIP0 MOG-229ENST00000483013 279 ntTSL 1 (best) BASIC13.29□□□□□ -0.28
RIF1Q5UIP0 MOG-232ENST00000490427 327 ntTSL 1 (best) BASIC13.29□□□□□ -0.28
RIF1Q5UIP0 WISP1-205ENST00000519433 545 ntTSL 1 (best) BASIC13.29□□□□□ -0.28
RIF1Q5UIP0 AC136698.1-201ENST00000558110 546 ntTSL 4 BASIC13.29□□□□□ -0.28
RIF1Q5UIP0 AC048382.4-201ENST00000559065 546 ntTSL 4 BASIC13.29□□□□□ -0.28
RIF1Q5UIP0 SNHG21-205ENST00000561107 790 ntTSL 2 BASIC13.29□□□□□ -0.28
RIF1Q5UIP0 AC099684.2-201ENST00000574520 870 ntTSL 5 BASIC13.29□□□□□ -0.28
RIF1Q5UIP0 RN7SL827P-201ENST00000607480 288 ntBASIC13.29□□□□□ -0.28
RIF1Q5UIP0 FKBP4P7-201ENST00000433874 1363 ntBASIC13.28□□□□□ -0.28
RIF1Q5UIP0 WNT2B-202ENST00000369684 3818 ntAPPRIS P1 TSL 1 (best) BASIC13.28□□□□□ -0.28
RIF1Q5UIP0 PLCB1-218ENST00000629992 3095 ntTSL 1 (best) BASIC13.28□□□□□ -0.28
RIF1Q5UIP0 AC025171.1-202ENST00000499871 2271 ntTSL 1 (best) BASIC13.28□□□□□ -0.28
RIF1Q5UIP0 SLC25A35-202ENST00000577745 1860 ntAPPRIS P1 TSL 1 (best) BASIC13.28□□□□□ -0.28
RIF1Q5UIP0 COG3-201ENST00000349995 4498 ntAPPRIS P1 TSL 1 (best) BASIC13.28□□□□□ -0.28
RIF1Q5UIP0 EML2-203ENST00000536630 2791 ntAPPRIS ALT2 TSL 2 BASIC13.28□□□□□ -0.28
RIF1Q5UIP0 AC126365.1-201ENST00000578585 1514 ntBASIC13.28□□□□□ -0.28
RIF1Q5UIP0 TARS2-203ENST00000369054 1998 ntTSL 2 BASIC13.28□□□□□ -0.28
RIF1Q5UIP0 SULT1A2-204ENST00000533150 1991 ntTSL 2 BASIC13.28□□□□□ -0.28
RIF1Q5UIP0 TFAP2A-201ENST00000319516 2035 ntTSL 5 BASIC13.28□□□□□ -0.28
RIF1Q5UIP0 TAP1-201ENST00000354258 2959 ntAPPRIS P1 TSL 1 (best) BASIC13.28□□□□□ -0.28
RIF1Q5UIP0 TGM6-202ENST00000381423 2158 ntTSL 1 (best) BASIC13.28□□□□□ -0.28
RIF1Q5UIP0 VPREB3-201ENST00000248948 610 ntAPPRIS P1 TSL 1 (best) BASIC13.28□□□□□ -0.28
RIF1Q5UIP0 CST2-201ENST00000304725 748 ntAPPRIS P1 TSL 1 (best) BASIC13.28□□□□□ -0.28
RIF1Q5UIP0 FANK1-203ENST00000368693 1294 ntAPPRIS P1 TSL 1 (best) BASIC13.28□□□□□ -0.28
RIF1Q5UIP0 UBIAD1-201ENST00000376804 825 ntTSL 2 BASIC13.28□□□□□ -0.28
RIF1Q5UIP0 FAM96A-202ENST00000380290 826 ntTSL 2 BASIC13.28□□□□□ -0.28
RIF1Q5UIP0 VPREB3-202ENST00000398465 503 ntTSL 3 BASIC13.28□□□□□ -0.28
RIF1Q5UIP0 ASLP1-201ENST00000428790 637 ntBASIC13.28□□□□□ -0.28
RIF1Q5UIP0 NDFIP2-AS1-201ENST00000457171 431 ntTSL 3 BASIC13.28□□□□□ -0.28
RIF1Q5UIP0 ATP5L2-201ENST00000505920 799 ntAPPRIS P1 BASIC13.28□□□□□ -0.28
Retrieved 100 of 98,524 protein–RNA pairs in 37 ms