Protein–RNA interactions for Protein: Q4VGL6

Rc3h1, Roquin-1, mousemouse

Known RBP Predictions only

Length 1,130 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rc3h1Q4VGL6 Gm5449-201ENSMUST00000081132 357 ntBASIC12.61□□□□□ -0.39
Rc3h1Q4VGL6 Iqsec2-201ENSMUST00000096275 5252 ntAPPRIS P3 TSL 2 BASIC12.61□□□□□ -0.39
Rc3h1Q4VGL6 Wdr46-ps-201ENSMUST00000200591 1712 ntBASIC12.61□□□□□ -0.39
Rc3h1Q4VGL6 Trpm7-202ENSMUST00000103224 7107 ntAPPRIS P3 TSL 1 (best) BASIC12.61□□□□□ -0.39
Rc3h1Q4VGL6 Ccdc189-201ENSMUST00000072155 2536 ntAPPRIS P1 TSL 1 (best) BASIC12.61□□□□□ -0.39
Rc3h1Q4VGL6 Acsbg1-201ENSMUST00000034822 2880 ntAPPRIS P1 TSL 1 (best) BASIC12.61□□□□□ -0.39
Rc3h1Q4VGL6 Bco1-203ENSMUST00000176860 1995 ntAPPRIS ALT2 TSL 1 (best) BASIC12.61□□□□□ -0.39
Rc3h1Q4VGL6 Milr1-202ENSMUST00000106794 1514 ntAPPRIS ALT2 TSL 1 (best) BASIC12.61□□□□□ -0.39
Rc3h1Q4VGL6 Nefm-202ENSMUST00000111089 3680 ntAPPRIS ALT2 TSL 1 (best) BASIC12.61□□□□□ -0.39
Rc3h1Q4VGL6 Cdc7-204ENSMUST00000118261 3129 ntAPPRIS P3 TSL 1 (best) BASIC12.61□□□□□ -0.39
Rc3h1Q4VGL6 Hipk2-204ENSMUST00000160360 3907 ntTSL 1 (best) BASIC12.61□□□□□ -0.39
Rc3h1Q4VGL6 Krba1-202ENSMUST00000077093 8380 ntTSL 1 (best) BASIC12.61□□□□□ -0.39
Rc3h1Q4VGL6 Gm15965-201ENSMUST00000123318 1428 ntTSL 1 (best) BASIC12.61□□□□□ -0.39
Rc3h1Q4VGL6 Cfap69-201ENSMUST00000054865 4956 ntAPPRIS P2 TSL 1 (best) BASIC12.61□□□□□ -0.39
Rc3h1Q4VGL6 Myo7a-203ENSMUST00000107127 6806 ntAPPRIS P3 TSL 5 BASIC12.61□□□□□ -0.39
Rc3h1Q4VGL6 Nr5a1-201ENSMUST00000028084 2947 ntAPPRIS P1 TSL 1 (best) BASIC12.61□□□□□ -0.39
Rc3h1Q4VGL6 Gm42941-201ENSMUST00000200347 1321 ntBASIC12.61□□□□□ -0.39
Rc3h1Q4VGL6 Vwa7-201ENSMUST00000007245 4313 ntAPPRIS P3 TSL 1 (best) BASIC12.61□□□□□ -0.39
Rc3h1Q4VGL6 Ptp4a3-203ENSMUST00000165541 3539 ntAPPRIS P1 TSL 5 BASIC12.61□□□□□ -0.39
Rc3h1Q4VGL6 Ppp4r1-201ENSMUST00000073104 3850 ntAPPRIS P3 TSL 1 (best) BASIC12.61□□□□□ -0.39
Rc3h1Q4VGL6 Myo6-204ENSMUST00000113268 7927 ntTSL 5 BASIC12.61□□□□□ -0.39
Rc3h1Q4VGL6 Hyal1-202ENSMUST00000112387 2706 ntAPPRIS ALT2 TSL 1 (best) BASIC12.61□□□□□ -0.39
Rc3h1Q4VGL6 Pcnx-201ENSMUST00000021567 12139 ntAPPRIS P2 TSL 2 BASIC12.6□□□□□ -0.39
Rc3h1Q4VGL6 Grik4-201ENSMUST00000034515 3413 ntAPPRIS P1 TSL 5 BASIC12.6□□□□□ -0.39
Rc3h1Q4VGL6 Rps6ka6-204ENSMUST00000113428 4135 ntAPPRIS ALT2 TSL 5 BASIC12.6□□□□□ -0.39
Rc3h1Q4VGL6 Hyal2-206ENSMUST00000195681 2968 ntBASIC12.6□□□□□ -0.39
Rc3h1Q4VGL6 Gm16677-201ENSMUST00000181229 2174 ntTSL 1 (best) BASIC12.6□□□□□ -0.39
Rc3h1Q4VGL6 Gm27174-201ENSMUST00000184493 2174 ntTSL 1 (best) BASIC12.6□□□□□ -0.39
Rc3h1Q4VGL6 Dclk2-209ENSMUST00000195561 3486 ntAPPRIS ALT2 TSL 1 (best) BASIC12.6□□□□□ -0.39
Rc3h1Q4VGL6 Bdnf-205ENSMUST00000111045 3973 ntAPPRIS P1 TSL 1 (best) BASIC12.6□□□□□ -0.39
Rc3h1Q4VGL6 Cdkl2-201ENSMUST00000069937 3976 ntAPPRIS ALT2 TSL 1 (best) BASIC12.6□□□□□ -0.39
Rc3h1Q4VGL6 Scaf1-206ENSMUST00000211735 4209 ntAPPRIS P1 TSL 1 (best) BASIC12.6□□□□□ -0.39
Rc3h1Q4VGL6 Gm12912-201ENSMUST00000121596 1381 ntBASIC12.6□□□□□ -0.39
Rc3h1Q4VGL6 Unkl-201ENSMUST00000015271 3414 ntTSL 1 (best) BASIC12.6□□□□□ -0.39
Rc3h1Q4VGL6 Gm45165-201ENSMUST00000207763 1631 ntBASIC12.6□□□□□ -0.39
Rc3h1Q4VGL6 Krt34-201ENSMUST00000056362 1609 ntAPPRIS P1 TSL 1 (best) BASIC12.6□□□□□ -0.39
Rc3h1Q4VGL6 Lnx1-203ENSMUST00000113531 3098 ntTSL 1 (best) BASIC12.6□□□□□ -0.39
Rc3h1Q4VGL6 Ing1-204ENSMUST00000210041 1881 ntTSL 5 BASIC12.6□□□□□ -0.39
Rc3h1Q4VGL6 Tnfrsf9-203ENSMUST00000105671 1278 ntAPPRIS P3 TSL 1 (best) BASIC12.6□□□□□ -0.39
Rc3h1Q4VGL6 Gm3476-201ENSMUST00000112742 853 ntAPPRIS ALT2 TSL 5 BASIC12.6□□□□□ -0.39
Rc3h1Q4VGL6 Plac8-203ENSMUST00000112910 1224 ntAPPRIS P1 TSL 2 BASIC12.6□□□□□ -0.39
Rc3h1Q4VGL6 Gm11919-201ENSMUST00000117609 721 ntBASIC12.6□□□□□ -0.39
Rc3h1Q4VGL6 Gm5764-201ENSMUST00000118817 885 ntBASIC12.6□□□□□ -0.39
Rc3h1Q4VGL6 Gm12752-201ENSMUST00000121657 811 ntBASIC12.6□□□□□ -0.39
Rc3h1Q4VGL6 Gm28036-202ENSMUST00000132494 5505 ntAPPRIS P5 TSL 2 BASIC12.6□□□□□ -0.39
Rc3h1Q4VGL6 Gm23757-201ENSMUST00000158353 100 ntBASIC12.6□□□□□ -0.39
Rc3h1Q4VGL6 Fxyd5-209ENSMUST00000162087 762 ntAPPRIS P3 TSL 3 BASIC12.6□□□□□ -0.39
Rc3h1Q4VGL6 Platr17-201ENSMUST00000172817 807 ntAPPRIS P1 TSL 1 (best) BASIC12.6□□□□□ -0.39
Rc3h1Q4VGL6 Gm21739-202ENSMUST00000188917 933 ntAPPRIS P1 TSL 5 BASIC12.6□□□□□ -0.39
Rc3h1Q4VGL6 Gm42833-201ENSMUST00000196019 2124 ntBASIC12.6□□□□□ -0.39
Rc3h1Q4VGL6 Gm43564-201ENSMUST00000196185 211 ntBASIC12.6□□□□□ -0.39
Rc3h1Q4VGL6 Gm7047-201ENSMUST00000196224 1063 ntBASIC12.6□□□□□ -0.39
Rc3h1Q4VGL6 Tmbim7-204ENSMUST00000198739 1270 ntAPPRIS ALT2 TSL 1 (best) BASIC12.6□□□□□ -0.39
Rc3h1Q4VGL6 Gm6312-201ENSMUST00000204060 1194 ntBASIC12.6□□□□□ -0.39
Rc3h1Q4VGL6 Gm6855-201ENSMUST00000206307 790 ntBASIC12.6□□□□□ -0.39
Rc3h1Q4VGL6 Gm1000-202ENSMUST00000222329 757 ntTSL 5 BASIC12.6□□□□□ -0.39
Rc3h1Q4VGL6 AC116589.3-201ENSMUST00000223034 1165 ntTSL 5 BASIC12.6□□□□□ -0.39
Rc3h1Q4VGL6 Gsto1-201ENSMUST00000026050 1182 ntAPPRIS P1 TSL 1 (best) BASIC12.6□□□□□ -0.39
Rc3h1Q4VGL6 Ly96-201ENSMUST00000026881 632 ntAPPRIS P1 TSL 1 (best) BASIC12.6□□□□□ -0.39
Rc3h1Q4VGL6 Triap1-201ENSMUST00000031508 1088 ntAPPRIS P1 TSL 1 (best) BASIC12.6□□□□□ -0.39
Rc3h1Q4VGL6 Hbb-y-201ENSMUST00000033229 633 ntAPPRIS P1 TSL 1 (best) BASIC12.6□□□□□ -0.39
Rc3h1Q4VGL6 Tnfrsf9-202ENSMUST00000060901 1003 ntAPPRIS ALT2 TSL 1 (best) BASIC12.6□□□□□ -0.39
Rc3h1Q4VGL6 Clip1-202ENSMUST00000063905 4589 ntAPPRIS ALT2 TSL 5 BASIC12.6□□□□□ -0.39
Rc3h1Q4VGL6 Nol4l-202ENSMUST00000109784 5610 ntTSL 1 (best) BASIC12.6□□□□□ -0.39
Rc3h1Q4VGL6 Elovl7-201ENSMUST00000022207 4013 ntAPPRIS P1 TSL 1 (best) BASIC12.6□□□□□ -0.39
Rc3h1Q4VGL6 Ribc2-201ENSMUST00000023067 1652 ntAPPRIS P1 TSL 1 (best) BASIC12.6□□□□□ -0.39
Rc3h1Q4VGL6 AC124577.2-201ENSMUST00000217413 2420 ntBASIC12.6□□□□□ -0.39
Rc3h1Q4VGL6 Sugp1-201ENSMUST00000011450 2681 ntAPPRIS P1 TSL 1 (best) BASIC12.6□□□□□ -0.39
Rc3h1Q4VGL6 Gm17281-201ENSMUST00000180732 3589 ntTSL 1 (best) BASIC12.6□□□□□ -0.39
Rc3h1Q4VGL6 Slc43a1-204ENSMUST00000121114 3089 ntAPPRIS ALT2 TSL 1 (best) BASIC12.6□□□□□ -0.39
Rc3h1Q4VGL6 Cklf-202ENSMUST00000098464 1804 ntAPPRIS ALT2 TSL 1 (best) BASIC12.6□□□□□ -0.39
Rc3h1Q4VGL6 Snx27-208ENSMUST00000200642 1308 ntTSL 5 BASIC12.6□□□□□ -0.39
Rc3h1Q4VGL6 Chrnb2-203ENSMUST00000200558 3482 ntTSL 1 (best) BASIC12.6□□□□□ -0.39
Rc3h1Q4VGL6 Elmo2-201ENSMUST00000071699 3247 ntAPPRIS ALT2 TSL 1 (best) BASIC12.6□□□□□ -0.39
Rc3h1Q4VGL6 Eya2-201ENSMUST00000063433 2460 ntAPPRIS P1 TSL 1 (best) BASIC12.6□□□□□ -0.39
Rc3h1Q4VGL6 Slc44a4-202ENSMUST00000169230 2246 ntTSL 1 (best) BASIC12.6□□□□□ -0.39
Rc3h1Q4VGL6 Gucy2e-203ENSMUST00000108665 3645 ntAPPRIS P1 TSL 5 BASIC12.6□□□□□ -0.39
Rc3h1Q4VGL6 Dpysl5-201ENSMUST00000088081 5022 ntAPPRIS P1 TSL 1 (best) BASIC12.6□□□□□ -0.39
Rc3h1Q4VGL6 Wipf1-203ENSMUST00000102680 4032 ntAPPRIS P1 TSL 1 (best) BASIC12.59□□□□□ -0.39
Rc3h1Q4VGL6 Gfra1-203ENSMUST00000129100 4415 ntTSL 1 (best) BASIC12.59□□□□□ -0.39
Rc3h1Q4VGL6 Slc36a4-201ENSMUST00000061568 6539 ntAPPRIS P2 TSL 1 (best) BASIC12.59□□□□□ -0.39
Rc3h1Q4VGL6 D130043K22Rik-201ENSMUST00000006893 4973 ntAPPRIS P1 TSL 1 (best) BASIC12.59□□□□□ -0.39
Rc3h1Q4VGL6 Pip5k1a-204ENSMUST00000107232 3437 ntAPPRIS ALT2 TSL 5 BASIC12.59□□□□□ -0.39
Rc3h1Q4VGL6 Nsd3-210ENSMUST00000153597 1865 ntTSL 1 (best) BASIC12.59□□□□□ -0.39
Rc3h1Q4VGL6 Gm6768-201ENSMUST00000022467 1878 ntBASIC12.59□□□□□ -0.39
Rc3h1Q4VGL6 S100pbp-203ENSMUST00000106059 4084 ntTSL 1 (best) BASIC12.59□□□□□ -0.39
Rc3h1Q4VGL6 Pigq-219ENSMUST00000208071 2926 ntAPPRIS ALT2 TSL 5 BASIC12.59□□□□□ -0.39
Rc3h1Q4VGL6 CT010480.4-201ENSMUST00000224654 2283 ntBASIC12.59□□□□□ -0.39
Rc3h1Q4VGL6 Epm2aip1-201ENSMUST00000060711 7149 ntAPPRIS P1 BASIC12.59□□□□□ -0.39
Rc3h1Q4VGL6 Tnip1-201ENSMUST00000018482 2810 ntAPPRIS P3 TSL 1 (best) BASIC12.59□□□□□ -0.39
Rc3h1Q4VGL6 Vasn-201ENSMUST00000038770 2829 ntAPPRIS P1 TSL 1 (best) BASIC12.59□□□□□ -0.39
Rc3h1Q4VGL6 Coq8a-201ENSMUST00000027766 4026 ntAPPRIS P1 TSL 1 (best) BASIC12.59□□□□□ -0.39
Rc3h1Q4VGL6 Zfp14-201ENSMUST00000077787 1506 ntAPPRIS P1 TSL 1 (best) BASIC12.59□□□□□ -0.39
Rc3h1Q4VGL6 Slx4ip-206ENSMUST00000180277 2723 ntAPPRIS P1 TSL 3 BASIC12.59□□□□□ -0.39
Rc3h1Q4VGL6 Mcf2l-203ENSMUST00000110866 5108 ntTSL 1 (best) BASIC12.59□□□□□ -0.39
Rc3h1Q4VGL6 Gm14274-201ENSMUST00000117182 615 ntBASIC12.59□□□□□ -0.39
Rc3h1Q4VGL6 Thegl-203ENSMUST00000118941 746 ntTSL 3 BASIC12.59□□□□□ -0.39
Rc3h1Q4VGL6 Slfn5os-201ENSMUST00000127074 574 ntTSL 2 BASIC12.59□□□□□ -0.39
Rc3h1Q4VGL6 Ndufb5-204ENSMUST00000127477 1079 ntAPPRIS P1 TSL 1 (best) BASIC12.59□□□□□ -0.39
Rc3h1Q4VGL6 Gm14222-201ENSMUST00000128681 575 ntTSL 2 BASIC12.59□□□□□ -0.39
Retrieved 100 of 76,532 protein–RNA pairs in 77.6 ms