Protein–RNA interactions for Protein: P58771

Tpm1, Tropomyosin alpha-1 chain, mousemouse

Predictions only

Length 284 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Tpm1P58771 Prf1-201ENSMUST00000035419 1968 ntAPPRIS P1 TSL 1 (best) BASIC12.02□□□□□ -0.49
Tpm1P58771 Rhox2-ps-201ENSMUST00000117421 322 ntBASIC12.02□□□□□ -0.49
Tpm1P58771 Mrpl40-202ENSMUST00000119273 778 ntTSL 3 BASIC12.02□□□□□ -0.49
Tpm1P58771 Rpl13-ps1-201ENSMUST00000121801 668 ntBASIC12.02□□□□□ -0.49
Tpm1P58771 Gm12570-201ENSMUST00000122047 1030 ntBASIC12.02□□□□□ -0.49
Tpm1P58771 Gm14397-201ENSMUST00000124728 576 ntTSL 3 BASIC12.02□□□□□ -0.49
Tpm1P58771 Naa60-207ENSMUST00000150655 1166 ntAPPRIS P1 TSL 2 BASIC12.02□□□□□ -0.49
Tpm1P58771 Gm12589-201ENSMUST00000153767 638 ntTSL 1 (best) BASIC12.02□□□□□ -0.49
Tpm1P58771 Gm24844-201ENSMUST00000158679 127 ntBASIC12.02□□□□□ -0.49
Tpm1P58771 Gm43186-201ENSMUST00000198130 824 ntBASIC12.02□□□□□ -0.49
Tpm1P58771 Gm6905-201ENSMUST00000205729 511 ntBASIC12.02□□□□□ -0.49
Tpm1P58771 Med10-204ENSMUST00000221893 815 ntTSL 2 BASIC12.02□□□□□ -0.49
Tpm1P58771 Gm6994-201ENSMUST00000088880 1163 ntTSL 1 (best) BASIC12.02□□□□□ -0.49
Tpm1P58771 Cenpu-202ENSMUST00000093518 783 ntTSL 1 (best) BASIC12.02□□□□□ -0.49
Tpm1P58771 AC165148.1-201ENSMUST00000224795 2372 ntBASIC12.02□□□□□ -0.49
Tpm1P58771 Anxa4-202ENSMUST00000113675 2030 ntAPPRIS P1 TSL 1 (best) BASIC12.02□□□□□ -0.49
Tpm1P58771 Serpinc1-201ENSMUST00000064725 4970 ntAPPRIS P1 TSL 1 (best) BASIC12.02□□□□□ -0.49
Tpm1P58771 Gm5403-201ENSMUST00000117105 2795 ntBASIC12.02□□□□□ -0.49
Tpm1P58771 Hpgd-201ENSMUST00000034026 1683 ntAPPRIS P1 TSL 1 (best) BASIC12.02□□□□□ -0.49
Tpm1P58771 Slc16a5-202ENSMUST00000106532 2062 ntAPPRIS P1 TSL 1 (best) BASIC12.02□□□□□ -0.49
Tpm1P58771 Dmrtc1b-203ENSMUST00000118842 1321 ntAPPRIS ALT2 TSL 1 (best) BASIC12.02□□□□□ -0.49
Tpm1P58771 Slc24a1-201ENSMUST00000037798 5213 ntAPPRIS P1 TSL 1 (best) BASIC12.02□□□□□ -0.49
Tpm1P58771 Gm9220-201ENSMUST00000190721 2544 ntBASIC12.02□□□□□ -0.49
Tpm1P58771 5830437K03Rik-201ENSMUST00000199219 1379 ntBASIC12.02□□□□□ -0.49
Tpm1P58771 Fubp1-201ENSMUST00000106121 4525 ntAPPRIS P2 TSL 2 BASIC12.02□□□□□ -0.49
Tpm1P58771 Amph-201ENSMUST00000003345 3367 ntAPPRIS P3 TSL 1 (best) BASIC12.02□□□□□ -0.49
Tpm1P58771 Txndc16-205ENSMUST00000139526 5045 ntAPPRIS ALT2 TSL 1 (best) BASIC12.02□□□□□ -0.49
Tpm1P58771 Pip5k1a-201ENSMUST00000005768 3480 ntAPPRIS ALT2 TSL 5 BASIC12.02□□□□□ -0.49
Tpm1P58771 Lrsam1-202ENSMUST00000113200 4030 ntAPPRIS P1 TSL 5 BASIC12.02□□□□□ -0.49
Tpm1P58771 Lig3-212ENSMUST00000173727 3636 ntAPPRIS ALT2 TSL 1 (best) BASIC12.01□□□□□ -0.49
Tpm1P58771 Gm37003-201ENSMUST00000194702 2827 ntBASIC12.01□□□□□ -0.49
Tpm1P58771 4933425M03Rik-201ENSMUST00000195991 1544 ntBASIC12.01□□□□□ -0.49
Tpm1P58771 4930539E08Rik-201ENSMUST00000062357 4597 ntAPPRIS P1 TSL 1 (best) BASIC12.01□□□□□ -0.49
Tpm1P58771 Zfp286-202ENSMUST00000108705 1979 ntTSL 1 (best) BASIC12.01□□□□□ -0.49
Tpm1P58771 C1rb-201ENSMUST00000184647 2429 ntAPPRIS P1 TSL 1 (best) BASIC12.01□□□□□ -0.49
Tpm1P58771 Capn3-206ENSMUST00000110721 2898 ntTSL 1 (best) BASIC12.01□□□□□ -0.49
Tpm1P58771 Pcdhb10-201ENSMUST00000051126 2851 ntAPPRIS P1 BASIC12.01□□□□□ -0.49
Tpm1P58771 Fbxl5-202ENSMUST00000087465 4237 ntTSL 1 (best) BASIC12.01□□□□□ -0.49
Tpm1P58771 Gm28635-201ENSMUST00000189772 4734 ntAPPRIS P1 TSL 5 BASIC12.01□□□□□ -0.49
Tpm1P58771 Atxn2l-206ENSMUST00000206577 3894 ntAPPRIS ALT2 TSL 5 BASIC12.01□□□□□ -0.49
Tpm1P58771 Dcun1d2-202ENSMUST00000110838 2955 ntTSL 1 (best) BASIC12.01□□□□□ -0.49
Tpm1P58771 Slc39a14-210ENSMUST00000152067 2075 ntAPPRIS ALT2 TSL 1 (best) BASIC12.01□□□□□ -0.49
Tpm1P58771 Tuft1-204ENSMUST00000196733 2555 ntAPPRIS ALT2 TSL 1 (best) BASIC12.01□□□□□ -0.49
Tpm1P58771 Ly9-203ENSMUST00000111277 2155 ntAPPRIS ALT2 TSL 1 (best) BASIC12.01□□□□□ -0.49
Tpm1P58771 Gm37048-201ENSMUST00000194827 5578 ntBASIC12.01□□□□□ -0.49
Tpm1P58771 Mta1-202ENSMUST00000069690 2697 ntAPPRIS ALT2 TSL 5 BASIC12.01□□□□□ -0.49
Tpm1P58771 Nlrx1-201ENSMUST00000034621 3669 ntAPPRIS P1 TSL 1 (best) BASIC12.01□□□□□ -0.49
Tpm1P58771 Dglucy-201ENSMUST00000069782 3295 ntAPPRIS P2 TSL 1 (best) BASIC12.01□□□□□ -0.49
Tpm1P58771 Gm11298-201ENSMUST00000120503 1799 ntBASIC12.01□□□□□ -0.49
Tpm1P58771 Pdlim5-204ENSMUST00000168967 1755 ntTSL 1 (best) BASIC12.01□□□□□ -0.49
Tpm1P58771 Ltc4s-201ENSMUST00000101265 480 ntTSL 1 (best) BASIC12.01□□□□□ -0.49
Tpm1P58771 Gm16066-201ENSMUST00000118575 1086 ntTSL 3 BASIC12.01□□□□□ -0.49
Tpm1P58771 Ldha-ps2-201ENSMUST00000118722 1057 ntBASIC12.01□□□□□ -0.49
Tpm1P58771 Gm16219-201ENSMUST00000120096 274 ntBASIC12.01□□□□□ -0.49
Tpm1P58771 H2-M2-202ENSMUST00000171139 1298 ntAPPRIS ALT2 TSL 1 (best) BASIC12.01□□□□□ -0.49
Tpm1P58771 Gm17344-201ENSMUST00000171173 1159 ntTSL 1 (best) BASIC12.01□□□□□ -0.49
Tpm1P58771 Rpl31-202ENSMUST00000178079 487 ntAPPRIS P1 TSL 2 BASIC12.01□□□□□ -0.49
Tpm1P58771 Gm7255-201ENSMUST00000187371 908 ntBASIC12.01□□□□□ -0.49
Tpm1P58771 Gm39460-201ENSMUST00000215728 1266 ntTSL 5 BASIC12.01□□□□□ -0.49
Tpm1P58771 AC154436.1-201ENSMUST00000227272 782 ntBASIC12.01□□□□□ -0.49
Tpm1P58771 Gm9843-201ENSMUST00000052867 504 ntAPPRIS P1 BASIC12.01□□□□□ -0.49
Tpm1P58771 Lrmda-201ENSMUST00000075639 908 ntAPPRIS P2 TSL 1 (best) BASIC12.01□□□□□ -0.49
Tpm1P58771 Gm4763-201ENSMUST00000081657 882 ntAPPRIS P1 TSL 1 (best) BASIC12.01□□□□□ -0.49
Tpm1P58771 Olfr553-201ENSMUST00000098222 981 ntAPPRIS P1 BASIC12.01□□□□□ -0.49
Tpm1P58771 Ndufb2-205ENSMUST00000135671 4371 ntAPPRIS P1 TSL 1 (best) BASIC12.01□□□□□ -0.49
Tpm1P58771 Atp13a4-201ENSMUST00000039090 2878 ntTSL 1 (best) BASIC12.01□□□□□ -0.49
Tpm1P58771 Sertad3-201ENSMUST00000068641 1329 ntAPPRIS P1 TSL 1 (best) BASIC12.01□□□□□ -0.49
Tpm1P58771 4930417O13Rik-203ENSMUST00000204911 3458 ntTSL 1 (best) BASIC12.01□□□□□ -0.49
Tpm1P58771 Ndufab1-201ENSMUST00000033157 3479 ntAPPRIS P1 TSL 1 (best) BASIC12.01□□□□□ -0.49
Tpm1P58771 Armcx3-203ENSMUST00000086884 3488 ntAPPRIS P1 TSL 5 BASIC12.01□□□□□ -0.49
Tpm1P58771 AC123738.2-201ENSMUST00000223791 1899 ntBASIC12.01□□□□□ -0.49
Tpm1P58771 Gm5822-201ENSMUST00000161562 1378 ntBASIC12.01□□□□□ -0.49
Tpm1P58771 Cct3-201ENSMUST00000001452 1977 ntAPPRIS P1 TSL 1 (best) BASIC12.01□□□□□ -0.49
Tpm1P58771 Dclk1-203ENSMUST00000167204 6025 ntTSL 1 (best) BASIC12.01□□□□□ -0.49
Tpm1P58771 Cfap43-202ENSMUST00000095998 3764 ntAPPRIS P1 TSL 1 (best) BASIC12.01□□□□□ -0.49
Tpm1P58771 Pdlim2-201ENSMUST00000022681 1523 ntAPPRIS P1 TSL 1 (best) BASIC12.01□□□□□ -0.49
Tpm1P58771 Gm45124-201ENSMUST00000206723 2755 ntBASIC12.01□□□□□ -0.49
Tpm1P58771 Snhg17-203ENSMUST00000141809 1553 ntTSL 1 (best) BASIC12.01□□□□□ -0.49
Tpm1P58771 Gm10681-202ENSMUST00000178221 1605 ntAPPRIS P1 TSL 5 BASIC12□□□□□ -0.49
Tpm1P58771 Cnppd1-202ENSMUST00000168720 3669 ntAPPRIS P1 TSL 1 (best) BASIC12□□□□□ -0.49
Tpm1P58771 Ppp2r5c-205ENSMUST00000221715 2367 ntTSL 1 (best) BASIC12□□□□□ -0.49
Tpm1P58771 Lipg-201ENSMUST00000066532 3787 ntAPPRIS P1 TSL 1 (best) BASIC12□□□□□ -0.49
Tpm1P58771 Copa-206ENSMUST00000135192 4622 ntAPPRIS P1 TSL 1 (best) BASIC12□□□□□ -0.49
Tpm1P58771 Copb1-201ENSMUST00000033012 3346 ntAPPRIS P1 TSL 1 (best) BASIC12□□□□□ -0.49
Tpm1P58771 Frmpd1-201ENSMUST00000044773 4812 ntAPPRIS P1 TSL 1 (best) BASIC12□□□□□ -0.49
Tpm1P58771 Pitpnb-201ENSMUST00000086635 2761 ntAPPRIS P3 TSL 1 (best) BASIC12□□□□□ -0.49
Tpm1P58771 Ighv5-9-201ENSMUST00000103448 418 ntAPPRIS P1 BASIC12□□□□□ -0.49
Tpm1P58771 Hist1h3d-201ENSMUST00000105105 1249 ntAPPRIS P1 BASIC12□□□□□ -0.49
Tpm1P58771 Lyzl6-202ENSMUST00000107014 802 ntAPPRIS P1 TSL 1 (best) BASIC12□□□□□ -0.49
Tpm1P58771 Gm12216-202ENSMUST00000120776 826 ntAPPRIS ALT2 TSL 2 BASIC12□□□□□ -0.49
Tpm1P58771 Tnfrsf18-203ENSMUST00000122001 1078 ntAPPRIS ALT2 TSL 1 (best) BASIC12□□□□□ -0.49
Tpm1P58771 Cideb-201ENSMUST00000001497 1212 ntAPPRIS P1 TSL 1 (best) BASIC12□□□□□ -0.49
Tpm1P58771 Armc2-208ENSMUST00000162405 1135 ntTSL 1 (best) BASIC12□□□□□ -0.49
Tpm1P58771 Gm21778-201ENSMUST00000178779 471 ntBASIC12□□□□□ -0.49
Tpm1P58771 Gm42682-201ENSMUST00000198349 1265 ntBASIC12□□□□□ -0.49
Tpm1P58771 1700013M08Rik-202ENSMUST00000200080 798 ntBASIC12□□□□□ -0.49
Tpm1P58771 Gm8574-201ENSMUST00000203207 924 ntBASIC12□□□□□ -0.49
Tpm1P58771 Gm36028-202ENSMUST00000205931 1161 ntAPPRIS P1 TSL 5 BASIC12□□□□□ -0.49
Tpm1P58771 Lgals4-207ENSMUST00000208971 1298 ntAPPRIS ALT2 TSL 1 (best) BASIC12□□□□□ -0.49
Tpm1P58771 Gm45909-201ENSMUST00000212413 1031 ntBASIC12□□□□□ -0.49
Retrieved 100 of 76,532 protein–RNA pairs in 77.2 ms