Protein–RNA interactions for Protein: P31650

Slc6a11, Sodium- and chloride-dependent GABA transporter 3, mousemouse

Predictions only

Length 627 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Slc6a11P31650 Atp6v1e1-201ENSMUST00000019354 1312 ntAPPRIS P1 TSL 1 (best) BASIC10.31□□□□□ -0.76
Slc6a11P31650 Lama4-201ENSMUST00000019992 6046 ntAPPRIS P1 TSL 1 (best) BASIC10.31□□□□□ -0.76
Slc6a11P31650 Gm43372-201ENSMUST00000202662 3016 ntBASIC10.31□□□□□ -0.76
Slc6a11P31650 AC140462.2-201ENSMUST00000225718 2433 ntBASIC10.31□□□□□ -0.76
Slc6a11P31650 Filip1l-202ENSMUST00000159414 3253 ntTSL 1 (best) BASIC10.31□□□□□ -0.76
Slc6a11P31650 Ntrk3-205ENSMUST00000193002 2678 ntAPPRIS ALT2 TSL 5 BASIC10.3□□□□□ -0.76
Slc6a11P31650 Dip2a-205ENSMUST00000160048 6551 ntAPPRIS ALT2 TSL 5 BASIC10.3□□□□□ -0.76
Slc6a11P31650 Rab2b-201ENSMUST00000022765 2906 ntAPPRIS P1 TSL 1 (best) BASIC10.3□□□□□ -0.76
Slc6a11P31650 Gm11470-201ENSMUST00000118868 1475 ntBASIC10.3□□□□□ -0.76
Slc6a11P31650 Ecsit-203ENSMUST00000179422 1462 ntAPPRIS P1 TSL 1 (best) BASIC10.3□□□□□ -0.76
Slc6a11P31650 Aldh3a1-202ENSMUST00000108716 1721 ntAPPRIS P1 TSL 1 (best) BASIC10.3□□□□□ -0.76
Slc6a11P31650 5330417C22Rik-202ENSMUST00000106625 5836 ntAPPRIS P1 TSL 5 BASIC10.3□□□□□ -0.76
Slc6a11P31650 Sh3gl2-204ENSMUST00000107189 3231 ntTSL 1 (best) BASIC10.3□□□□□ -0.76
Slc6a11P31650 Tacc2-205ENSMUST00000207282 3464 ntAPPRIS ALT2 TSL 1 (best) BASIC10.3□□□□□ -0.76
Slc6a11P31650 Fcamr-202ENSMUST00000112477 1879 ntAPPRIS ALT2 TSL 1 (best) BASIC10.3□□□□□ -0.76
Slc6a11P31650 Arhgap33os-201ENSMUST00000124276 2648 ntTSL 2 BASIC10.3□□□□□ -0.76
Slc6a11P31650 Gm6903-201ENSMUST00000160509 1366 ntBASIC10.3□□□□□ -0.76
Slc6a11P31650 Gm5822-201ENSMUST00000161562 1378 ntBASIC10.3□□□□□ -0.76
Slc6a11P31650 Mgl2-205ENSMUST00000165951 1635 ntAPPRIS ALT2 TSL 1 (best) BASIC10.3□□□□□ -0.76
Slc6a11P31650 Pcdh20-202ENSMUST00000192557 3362 ntAPPRIS P1 TSL 1 (best) BASIC10.3□□□□□ -0.76
Slc6a11P31650 5830437K03Rik-201ENSMUST00000199219 1379 ntBASIC10.3□□□□□ -0.76
Slc6a11P31650 AC122382.1-201ENSMUST00000225869 2371 ntBASIC10.3□□□□□ -0.76
Slc6a11P31650 Sirpa-204ENSMUST00000103203 3674 ntAPPRIS P3 TSL 5 BASIC10.3□□□□□ -0.76
Slc6a11P31650 Furin-202ENSMUST00000120753 4332 ntAPPRIS P1 TSL 5 BASIC10.3□□□□□ -0.76
Slc6a11P31650 Clic3-201ENSMUST00000102918 791 ntAPPRIS ALT1 TSL 3 BASIC10.3□□□□□ -0.76
Slc6a11P31650 Gm11422-201ENSMUST00000118925 1103 ntBASIC10.3□□□□□ -0.76
Slc6a11P31650 Gm13328-201ENSMUST00000120816 1020 ntBASIC10.3□□□□□ -0.76
Slc6a11P31650 Gm13022-201ENSMUST00000121181 285 ntBASIC10.3□□□□□ -0.76
Slc6a11P31650 Cfap100-204ENSMUST00000134224 849 ntTSL 1 (best) BASIC10.3□□□□□ -0.76
Slc6a11P31650 Asgr1-205ENSMUST00000146411 1188 ntAPPRIS P3 TSL 1 (best) BASIC10.3□□□□□ -0.76
Slc6a11P31650 BC016548-202ENSMUST00000153797 805 ntTSL 1 (best) BASIC10.3□□□□□ -0.76
Slc6a11P31650 Gm23694-201ENSMUST00000179335 110 ntBASIC10.3□□□□□ -0.76
Slc6a11P31650 Rpain-201ENSMUST00000018593 1100 ntAPPRIS P1 TSL 1 (best) BASIC10.3□□□□□ -0.76
Slc6a11P31650 Gm28306-201ENSMUST00000191315 529 ntTSL 5 BASIC10.3□□□□□ -0.76
Slc6a11P31650 Cd1d2-202ENSMUST00000192481 1131 ntTSL 1 (best) BASIC10.3□□□□□ -0.76
Slc6a11P31650 Gm5100-201ENSMUST00000195631 589 ntBASIC10.3□□□□□ -0.76
Slc6a11P31650 Cabcoco1-201ENSMUST00000020103 1262 ntAPPRIS P2 TSL 1 (best) BASIC10.3□□□□□ -0.76
Slc6a11P31650 Fxyd4-202ENSMUST00000203066 522 ntTSL 3 BASIC10.3□□□□□ -0.76
Slc6a11P31650 Chn2-212ENSMUST00000204115 783 ntTSL 5 BASIC10.3□□□□□ -0.76
Slc6a11P31650 Gm45441-202ENSMUST00000209301 1235 ntTSL 1 (best) BASIC10.3□□□□□ -0.76
Slc6a11P31650 Gm3619-201ENSMUST00000219947 775 ntBASIC10.3□□□□□ -0.76
Slc6a11P31650 Gm18856-203ENSMUST00000222015 483 ntTSL 2 BASIC10.3□□□□□ -0.76
Slc6a11P31650 1600002K03Rik-201ENSMUST00000041882 678 ntAPPRIS P1 TSL 1 (best) BASIC10.3□□□□□ -0.76
Slc6a11P31650 Itga11-201ENSMUST00000034774 4969 ntAPPRIS P1 TSL 1 (best) BASIC10.3□□□□□ -0.76
Slc6a11P31650 Gm16677-201ENSMUST00000181229 2174 ntTSL 1 (best) BASIC10.3□□□□□ -0.76
Slc6a11P31650 Gm27174-201ENSMUST00000184493 2174 ntTSL 1 (best) BASIC10.3□□□□□ -0.76
Slc6a11P31650 Ptcd1-201ENSMUST00000031628 3087 ntAPPRIS P1 TSL 1 (best) BASIC10.3□□□□□ -0.76
Slc6a11P31650 Ccar2-201ENSMUST00000035612 3725 ntAPPRIS P1 TSL 1 (best) BASIC10.3□□□□□ -0.76
Slc6a11P31650 Klhl18-205ENSMUST00000198400 4638 ntTSL 1 (best) BASIC10.3□□□□□ -0.76
Slc6a11P31650 Fan1-201ENSMUST00000163289 3460 ntAPPRIS P1 TSL 5 BASIC10.3□□□□□ -0.76
Slc6a11P31650 Gm10827-201ENSMUST00000181897 2586 ntTSL 1 (best) BASIC10.3□□□□□ -0.76
Slc6a11P31650 Hpgd-201ENSMUST00000034026 1683 ntAPPRIS P1 TSL 1 (best) BASIC10.3□□□□□ -0.76
Slc6a11P31650 Ypel4-201ENSMUST00000090729 1676 ntAPPRIS P1 TSL 1 (best) BASIC10.3□□□□□ -0.76
Slc6a11P31650 Bace1-202ENSMUST00000078111 4041 ntTSL 1 (best) BASIC10.3□□□□□ -0.76
Slc6a11P31650 Gm43375-201ENSMUST00000196705 2480 ntBASIC10.3□□□□□ -0.76
Slc6a11P31650 Msh3-201ENSMUST00000022220 3937 ntAPPRIS ALT2 TSL 1 (best) BASIC10.3□□□□□ -0.76
Slc6a11P31650 Gm11735-201ENSMUST00000106377 1581 ntBASIC10.3□□□□□ -0.76
Slc6a11P31650 Fam234a-202ENSMUST00000118487 2629 ntAPPRIS P1 TSL 1 (best) BASIC10.3□□□□□ -0.76
Slc6a11P31650 Gm26783-201ENSMUST00000181197 2377 ntTSL 1 (best) BASIC10.3□□□□□ -0.76
Slc6a11P31650 Tnk2-207ENSMUST00000115126 4358 ntTSL 5 BASIC10.3□□□□□ -0.76
Slc6a11P31650 Slc10a3-204ENSMUST00000114147 1708 ntAPPRIS ALT2 TSL 5 BASIC10.3□□□□□ -0.76
Slc6a11P31650 Fnbp1l-201ENSMUST00000162409 5198 ntTSL 5 BASIC10.3□□□□□ -0.76
Slc6a11P31650 AC122367.1-201ENSMUST00000221978 1709 ntBASIC10.3□□□□□ -0.76
Slc6a11P31650 CT868720.1-201ENSMUST00000223069 2544 ntBASIC10.3□□□□□ -0.76
Slc6a11P31650 Cstf1-201ENSMUST00000116375 3451 ntAPPRIS P1 TSL 1 (best) BASIC10.3□□□□□ -0.76
Slc6a11P31650 Prph2-201ENSMUST00000024773 2665 ntAPPRIS P1 TSL 1 (best) BASIC10.3□□□□□ -0.76
Slc6a11P31650 Gatsl2-201ENSMUST00000016088 7367 ntAPPRIS P1 TSL 1 (best) BASIC10.3□□□□□ -0.76
Slc6a11P31650 Gm8271-201ENSMUST00000171053 1469 ntAPPRIS P1 TSL 5 BASIC10.3□□□□□ -0.76
Slc6a11P31650 Maob-201ENSMUST00000040820 2411 ntAPPRIS P1 TSL 1 (best) BASIC10.29□□□□□ -0.76
Slc6a11P31650 Ptgfr-201ENSMUST00000029670 6624 ntAPPRIS P1 TSL 1 (best) BASIC10.29□□□□□ -0.76
Slc6a11P31650 Pabpc4-201ENSMUST00000078734 2700 ntTSL 1 (best) BASIC10.29□□□□□ -0.76
Slc6a11P31650 A130071D04Rik-201ENSMUST00000194467 5864 ntBASIC10.29□□□□□ -0.76
Slc6a11P31650 Hif1an-201ENSMUST00000040455 6194 ntAPPRIS P1 TSL 1 (best) BASIC10.29□□□□□ -0.76
Slc6a11P31650 Sult1a1-201ENSMUST00000106371 1370 ntTSL 1 (best) BASIC10.29□□□□□ -0.76
Slc6a11P31650 Sult1a1-202ENSMUST00000106372 1369 ntTSL 1 (best) BASIC10.29□□□□□ -0.76
Slc6a11P31650 Pax6-206ENSMUST00000111086 2601 ntAPPRIS P3 TSL 1 (best) BASIC10.29□□□□□ -0.76
Slc6a11P31650 Nfic-201ENSMUST00000020461 3348 ntAPPRIS P3 TSL 1 (best) BASIC10.29□□□□□ -0.76
Slc6a11P31650 Trim65-202ENSMUST00000106440 4040 ntTSL 5 BASIC10.29□□□□□ -0.76
Slc6a11P31650 Rnf6-206ENSMUST00000161859 3452 ntAPPRIS P1 TSL 1 (best) BASIC10.29□□□□□ -0.76
Slc6a11P31650 4921513H07Rik-201ENSMUST00000201403 2238 ntBASIC10.29□□□□□ -0.76
Slc6a11P31650 Myh8-201ENSMUST00000019625 6149 ntAPPRIS P1 TSL 1 (best) BASIC10.29□□□□□ -0.76
Slc6a11P31650 Dclk1-204ENSMUST00000196745 7962 ntAPPRIS ALT2 TSL 1 (best) BASIC10.29□□□□□ -0.76
Slc6a11P31650 Nos3-202ENSMUST00000115090 3697 ntAPPRIS ALT2 TSL 1 (best) BASIC10.29□□□□□ -0.76
Slc6a11P31650 Rpl23-201ENSMUST00000103146 1059 ntAPPRIS P1 TSL 1 (best) BASIC10.29□□□□□ -0.76
Slc6a11P31650 Uqcc1-202ENSMUST00000109631 1091 ntAPPRIS ALT2 TSL 5 BASIC10.29□□□□□ -0.76
Slc6a11P31650 Rbmx2-ps-201ENSMUST00000119377 930 ntBASIC10.29□□□□□ -0.76
Slc6a11P31650 Gm11244-201ENSMUST00000121243 237 ntBASIC10.29□□□□□ -0.76
Slc6a11P31650 Gm15412-201ENSMUST00000137193 1096 ntTSL 1 (best) BASIC10.29□□□□□ -0.76
Slc6a11P31650 Mfsd11-212ENSMUST00000153084 1194 ntTSL 5 BASIC10.29□□□□□ -0.76
Slc6a11P31650 H2al1i-201ENSMUST00000164729 318 ntAPPRIS P1 BASIC10.29□□□□□ -0.76
Slc6a11P31650 H2al1h-201ENSMUST00000177926 318 ntAPPRIS P1 BASIC10.29□□□□□ -0.76
Slc6a11P31650 H2al1d-201ENSMUST00000178595 318 ntAPPRIS P1 BASIC10.29□□□□□ -0.76
Slc6a11P31650 H2al1c-201ENSMUST00000178806 318 ntAPPRIS P1 BASIC10.29□□□□□ -0.76
Slc6a11P31650 H2al1f-201ENSMUST00000179004 318 ntAPPRIS P1 BASIC10.29□□□□□ -0.76
Slc6a11P31650 9930004E17Rik-201ENSMUST00000180031 498 ntBASIC10.29□□□□□ -0.76
Slc6a11P31650 Mir99ahg-209ENSMUST00000182820 835 ntTSL 1 (best) BASIC10.29□□□□□ -0.76
Slc6a11P31650 Gm37406-201ENSMUST00000192478 500 ntTSL 3 BASIC10.29□□□□□ -0.76
Slc6a11P31650 Gm8574-201ENSMUST00000203207 924 ntBASIC10.29□□□□□ -0.76
Slc6a11P31650 Gm18463-201ENSMUST00000207258 474 ntBASIC10.29□□□□□ -0.76
Slc6a11P31650 Gm7972-202ENSMUST00000208453 505 ntTSL 3 BASIC10.29□□□□□ -0.76
Retrieved 100 of 76,532 protein–RNA pairs in 67 ms