Protein–RNA interactions for Protein: P0CG49

Ubb, Polyubiquitin-B, mousemouse

Predictions only

Length 305 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
UbbP0CG49 Gm32219-201ENSMUST00000221234 1819 ntTSL 5 BASIC9.4□□□□□ -0.91
UbbP0CG49 Mlph-201ENSMUST00000027528 4499 ntAPPRIS P1 TSL 1 (best) BASIC9.4□□□□□ -0.91
UbbP0CG49 Slc13a5-205ENSMUST00000208056 3111 ntTSL 5 BASIC9.4□□□□□ -0.91
UbbP0CG49 Wars-205ENSMUST00000161410 2764 ntAPPRIS P1 TSL 1 (best) BASIC9.4□□□□□ -0.91
UbbP0CG49 Syncrip-208ENSMUST00000174282 3404 ntAPPRIS ALT1 TSL 1 (best) BASIC9.4□□□□□ -0.91
UbbP0CG49 Kcnj15-206ENSMUST00000113859 5046 ntTSL 1 (best) BASIC9.4□□□□□ -0.91
UbbP0CG49 Adamts4-203ENSMUST00000219033 4386 ntAPPRIS P2 TSL 1 (best) BASIC9.4□□□□□ -0.91
UbbP0CG49 Cacna1c-210ENSMUST00000187474 6911 ntAPPRIS ALT2 TSL 1 (best) BASIC9.4□□□□□ -0.91
UbbP0CG49 Plec-217ENSMUST00000169438 14827 ntTSL 1 (best) BASIC9.4□□□□□ -0.91
UbbP0CG49 Nrxn1-215ENSMUST00000173917 1439 ntTSL 2 BASIC9.39□□□□□ -0.91
UbbP0CG49 Gm40634-201ENSMUST00000214129 2001 ntTSL 5 BASIC9.39□□□□□ -0.91
UbbP0CG49 Lox-202ENSMUST00000171470 4468 ntAPPRIS P1 TSL 1 (best) BASIC9.39□□□□□ -0.91
UbbP0CG49 Morc2a-201ENSMUST00000093389 5085 ntAPPRIS P1 TSL 1 (best) BASIC9.39□□□□□ -0.91
UbbP0CG49 Slc25a21-205ENSMUST00000217690 1388 ntAPPRIS ALT2 TSL 1 (best) BASIC9.39□□□□□ -0.91
UbbP0CG49 Fam118b-202ENSMUST00000063782 1662 ntTSL 1 (best) BASIC9.39□□□□□ -0.91
UbbP0CG49 Sh3bgrl-201ENSMUST00000033598 2882 ntAPPRIS P1 TSL 1 (best) BASIC9.39□□□□□ -0.91
UbbP0CG49 Gripap1-201ENSMUST00000065932 3156 ntAPPRIS P3 TSL 1 (best) BASIC9.39□□□□□ -0.91
UbbP0CG49 Metap1-203ENSMUST00000197531 3708 ntTSL 1 (best) BASIC9.39□□□□□ -0.91
UbbP0CG49 Grik4-201ENSMUST00000034515 3413 ntAPPRIS P1 TSL 5 BASIC9.39□□□□□ -0.91
UbbP0CG49 Stpg2-201ENSMUST00000062306 2818 ntAPPRIS P1 TSL 1 (best) BASIC9.39□□□□□ -0.91
UbbP0CG49 Nanog-201ENSMUST00000012540 2211 ntAPPRIS P3 TSL 1 (best) BASIC9.39□□□□□ -0.91
UbbP0CG49 Epc1-201ENSMUST00000028100 3965 ntAPPRIS P1 TSL 1 (best) BASIC9.39□□□□□ -0.91
UbbP0CG49 Trim17-201ENSMUST00000047697 3664 ntTSL 2 BASIC9.39□□□□□ -0.91
UbbP0CG49 Gm16677-201ENSMUST00000181229 2174 ntTSL 1 (best) BASIC9.39□□□□□ -0.91
UbbP0CG49 Gm27174-201ENSMUST00000184493 2174 ntTSL 1 (best) BASIC9.39□□□□□ -0.91
UbbP0CG49 Zc3hc1-202ENSMUST00000102992 1865 ntTSL 1 (best) BASIC9.39□□□□□ -0.91
UbbP0CG49 Ralgps1-202ENSMUST00000091039 2738 ntTSL 1 (best) BASIC9.39□□□□□ -0.91
UbbP0CG49 Erich1-201ENSMUST00000110813 1557 ntAPPRIS P1 TSL 1 (best) BASIC9.39□□□□□ -0.91
UbbP0CG49 Krt33b-201ENSMUST00000073890 1581 ntAPPRIS P1 TSL 1 (best) BASIC9.39□□□□□ -0.91
UbbP0CG49 Mageb17-ps-201ENSMUST00000117902 919 ntBASIC9.39□□□□□ -0.91
UbbP0CG49 Gm16481-201ENSMUST00000119074 1227 ntBASIC9.39□□□□□ -0.91
UbbP0CG49 Nfu1-203ENSMUST00000120240 1195 ntAPPRIS P3 TSL 5 BASIC9.39□□□□□ -0.91
UbbP0CG49 AU015836-201ENSMUST00000120624 674 ntTSL 3 BASIC9.39□□□□□ -0.91
UbbP0CG49 Zfp629-204ENSMUST00000128731 823 ntTSL 3 BASIC9.39□□□□□ -0.91
UbbP0CG49 Gm15738-202ENSMUST00000140892 427 ntTSL 2 BASIC9.39□□□□□ -0.91
UbbP0CG49 Nudt6-207ENSMUST00000141438 899 ntTSL 2 BASIC9.39□□□□□ -0.91
UbbP0CG49 Gm53-203ENSMUST00000143887 757 ntTSL 3 BASIC9.39□□□□□ -0.91
UbbP0CG49 Gm13938-201ENSMUST00000156809 493 ntTSL 5 BASIC9.39□□□□□ -0.91
UbbP0CG49 Tmbim6-206ENSMUST00000161250 1148 ntAPPRIS P1 TSL 5 BASIC9.39□□□□□ -0.91
UbbP0CG49 Chtf8-203ENSMUST00000176090 615 ntTSL 5 BASIC9.39□□□□□ -0.91
UbbP0CG49 Gm28624-201ENSMUST00000186430 2131 ntBASIC9.39□□□□□ -0.91
UbbP0CG49 Gm4753-201ENSMUST00000188327 1255 ntBASIC9.39□□□□□ -0.91
UbbP0CG49 Pdcd5-ps-201ENSMUST00000191699 381 ntBASIC9.39□□□□□ -0.91
UbbP0CG49 Gm37852-201ENSMUST00000193027 350 ntBASIC9.39□□□□□ -0.91
UbbP0CG49 AU022133-201ENSMUST00000200601 873 ntBASIC9.39□□□□□ -0.91
UbbP0CG49 Cdipt-202ENSMUST00000205830 805 ntTSL 2 BASIC9.39□□□□□ -0.91
UbbP0CG49 Pgpep1l-202ENSMUST00000207874 677 ntAPPRIS P1 TSL 5 BASIC9.39□□□□□ -0.91
UbbP0CG49 Gm45331-201ENSMUST00000209868 554 ntBASIC9.39□□□□□ -0.91
UbbP0CG49 Gm7172-201ENSMUST00000218047 1152 ntBASIC9.39□□□□□ -0.91
UbbP0CG49 Abracl-204ENSMUST00000220110 768 ntAPPRIS P1 TSL 1 (best) BASIC9.39□□□□□ -0.91
UbbP0CG49 Fabp4-201ENSMUST00000029041 896 ntAPPRIS P1 TSL 1 (best) BASIC9.39□□□□□ -0.91
UbbP0CG49 Tagln3-201ENSMUST00000096057 1240 ntAPPRIS P1 TSL 1 (best) BASIC9.39□□□□□ -0.91
UbbP0CG49 Git2-203ENSMUST00000112183 4886 ntTSL 5 BASIC9.39□□□□□ -0.91
UbbP0CG49 Phtf1os-201ENSMUST00000160110 4046 ntBASIC9.39□□□□□ -0.91
UbbP0CG49 Serpinb8-202ENSMUST00000112706 4581 ntAPPRIS P1 TSL 1 (best) BASIC9.39□□□□□ -0.91
UbbP0CG49 Hsd3b5-201ENSMUST00000044094 1549 ntAPPRIS P1 TSL 1 (best) BASIC9.39□□□□□ -0.91
UbbP0CG49 9030407P20Rik-201ENSMUST00000180933 2310 ntTSL 1 (best) BASIC9.39□□□□□ -0.91
UbbP0CG49 Gm26614-201ENSMUST00000180386 3909 ntTSL 1 (best) BASIC9.39□□□□□ -0.91
UbbP0CG49 A830010M20Rik-208ENSMUST00000211896 5256 ntAPPRIS P1 TSL 5 BASIC9.39□□□□□ -0.91
UbbP0CG49 Ptk2b-203ENSMUST00000111121 3365 ntTSL 1 (best) BASIC9.39□□□□□ -0.91
UbbP0CG49 Idua-202ENSMUST00000112563 3373 ntAPPRIS P1 TSL 1 (best) BASIC9.39□□□□□ -0.91
UbbP0CG49 Srpx2-201ENSMUST00000033606 2290 ntAPPRIS P1 TSL 1 (best) BASIC9.39□□□□□ -0.91
UbbP0CG49 Gm26625-201ENSMUST00000181519 2538 ntTSL 5 BASIC9.39□□□□□ -0.91
UbbP0CG49 Anln-201ENSMUST00000040912 4605 ntAPPRIS P1 TSL 1 (best) BASIC9.39□□□□□ -0.91
UbbP0CG49 Ehmt1-202ENSMUST00000091348 4615 ntAPPRIS ALT2 TSL 5 BASIC9.39□□□□□ -0.91
UbbP0CG49 Tmem181b-ps-201ENSMUST00000167717 1413 ntBASIC9.39□□□□□ -0.91
UbbP0CG49 Commd1-204ENSMUST00000159081 4508 ntAPPRIS P1 TSL 1 (best) BASIC9.39□□□□□ -0.91
UbbP0CG49 Cdh1-203ENSMUST00000167688 3203 ntAPPRIS P1 TSL 5 BASIC9.39□□□□□ -0.91
UbbP0CG49 Bcat2-208ENSMUST00000211173 1684 ntTSL 1 (best) BASIC9.39□□□□□ -0.91
UbbP0CG49 Zfp330-201ENSMUST00000034147 1675 ntAPPRIS P1 TSL 1 (best) BASIC9.39□□□□□ -0.91
UbbP0CG49 Zmym6-201ENSMUST00000046751 4210 ntAPPRIS P1 TSL 1 (best) BASIC9.39□□□□□ -0.91
UbbP0CG49 Pif1-201ENSMUST00000047099 3685 ntAPPRIS P1 TSL 1 (best) BASIC9.38□□□□□ -0.91
UbbP0CG49 Tenm2-202ENSMUST00000102801 9908 ntAPPRIS P2 TSL 5 BASIC9.38□□□□□ -0.91
UbbP0CG49 Ap2b1-201ENSMUST00000018875 5625 ntAPPRIS P1 TSL 1 (best) BASIC9.38□□□□□ -0.91
UbbP0CG49 Echdc1-201ENSMUST00000020034 3856 ntTSL 1 (best) BASIC9.38□□□□□ -0.91
UbbP0CG49 Ppp2r5c-205ENSMUST00000221715 2367 ntTSL 1 (best) BASIC9.38□□□□□ -0.91
UbbP0CG49 Ccdc93-201ENSMUST00000036025 7274 ntAPPRIS P4 TSL 1 (best) BASIC9.38□□□□□ -0.91
UbbP0CG49 Myc-206ENSMUST00000167731 1821 ntTSL 1 (best) BASIC9.38□□□□□ -0.91
UbbP0CG49 Slc25a44-204ENSMUST00000195657 3504 ntAPPRIS P1 TSL 1 (best) BASIC9.38□□□□□ -0.91
UbbP0CG49 Gm45699-201ENSMUST00000212838 1576 ntTSL 2 BASIC9.38□□□□□ -0.91
UbbP0CG49 Lct-201ENSMUST00000073490 6174 ntAPPRIS P1 TSL 2 BASIC9.38□□□□□ -0.91
UbbP0CG49 Pde2a-201ENSMUST00000163751 4218 ntAPPRIS ALT2 TSL 1 (best) BASIC9.38□□□□□ -0.91
UbbP0CG49 Gm9415-201ENSMUST00000200462 1321 ntBASIC9.38□□□□□ -0.91
UbbP0CG49 Slc45a3-202ENSMUST00000177943 3212 ntAPPRIS P1 TSL 1 (best) BASIC9.38□□□□□ -0.91
UbbP0CG49 Hmgcll1-205ENSMUST00000183425 3239 ntTSL 5 BASIC9.38□□□□□ -0.91
UbbP0CG49 Gm40557-201ENSMUST00000220782 2736 ntTSL 5 BASIC9.38□□□□□ -0.91
UbbP0CG49 Pdlim5-204ENSMUST00000168967 1755 ntTSL 1 (best) BASIC9.38□□□□□ -0.91
UbbP0CG49 Upk1b-201ENSMUST00000057767 1769 ntAPPRIS P1 TSL 1 (best) BASIC9.38□□□□□ -0.91
UbbP0CG49 Arfgap3-202ENSMUST00000226124 2461 ntAPPRIS ALT2 BASIC9.38□□□□□ -0.91
UbbP0CG49 6430550D23Rik-201ENSMUST00000086145 1520 ntAPPRIS ALT2 TSL 1 (best) BASIC9.38□□□□□ -0.91
UbbP0CG49 Oprl1-205ENSMUST00000108768 2914 ntAPPRIS P3 TSL 1 (best) BASIC9.38□□□□□ -0.91
UbbP0CG49 Traf3-201ENSMUST00000021706 7060 ntAPPRIS P1 TSL 1 (best) BASIC9.38□□□□□ -0.91
UbbP0CG49 Rps3-202ENSMUST00000107096 952 ntTSL 3 BASIC9.38□□□□□ -0.91
UbbP0CG49 Nmi-202ENSMUST00000112705 1130 ntAPPRIS P1 TSL 1 (best) BASIC9.38□□□□□ -0.91
UbbP0CG49 Sgcg-202ENSMUST00000121148 1298 ntAPPRIS P1 TSL 1 (best) BASIC9.38□□□□□ -0.91
UbbP0CG49 Gm14017-201ENSMUST00000121934 386 ntBASIC9.38□□□□□ -0.91
UbbP0CG49 Gm14396-201ENSMUST00000126966 548 ntTSL 1 (best) BASIC9.38□□□□□ -0.91
UbbP0CG49 Gm45711-202ENSMUST00000164175 979 ntAPPRIS P1 TSL 5 BASIC9.38□□□□□ -0.91
UbbP0CG49 H2al1g-201ENSMUST00000179859 509 ntAPPRIS P1 BASIC9.38□□□□□ -0.91
UbbP0CG49 Gm26542-201ENSMUST00000180443 1235 ntTSL 1 (best) BASIC9.38□□□□□ -0.91
Retrieved 100 of 76,532 protein–RNA pairs in 37.1 ms