Protein–RNA interactions for Protein: P09633

Hoxc9, Homeobox protein Hox-C9, mousemouse

Predictions only

Length 260 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Hoxc9P09633 Spast-201ENSMUST00000024869 4672 ntAPPRIS P2 TSL 1 (best) BASIC13.96□□□□□ -0.17
Hoxc9P09633 Crybg3-205ENSMUST00000172910 2870 ntTSL 5 BASIC13.96□□□□□ -0.17
Hoxc9P09633 Maml2-202ENSMUST00000159294 6404 ntAPPRIS P1 TSL 5 BASIC13.96□□□□□ -0.17
Hoxc9P09633 Igll1-201ENSMUST00000100136 870 ntAPPRIS P1 TSL 5 BASIC13.96□□□□□ -0.17
Hoxc9P09633 Guca2b-202ENSMUST00000106309 697 ntAPPRIS ALT2 TSL 3 BASIC13.96□□□□□ -0.17
Hoxc9P09633 Gm13700-201ENSMUST00000118624 1128 ntBASIC13.96□□□□□ -0.17
Hoxc9P09633 Gm12435-201ENSMUST00000118949 1016 ntBASIC13.96□□□□□ -0.17
Hoxc9P09633 Gm14699-201ENSMUST00000122340 228 ntBASIC13.96□□□□□ -0.17
Hoxc9P09633 Ptpa-210ENSMUST00000136009 810 ntTSL 3 BASIC13.96□□□□□ -0.17
Hoxc9P09633 Gng2-203ENSMUST00000159073 960 ntAPPRIS P1 TSL 2 BASIC13.96□□□□□ -0.17
Hoxc9P09633 Gm16268-201ENSMUST00000159445 1157 ntTSL 1 (best) BASIC13.96□□□□□ -0.17
Hoxc9P09633 Stard6-206ENSMUST00000174118 1185 ntAPPRIS P1 TSL 1 (best) BASIC13.96□□□□□ -0.17
Hoxc9P09633 Rhoc-205ENSMUST00000196817 877 ntAPPRIS P1 TSL 3 BASIC13.96□□□□□ -0.17
Hoxc9P09633 Gm43866-201ENSMUST00000203894 839 ntBASIC13.96□□□□□ -0.17
Hoxc9P09633 Gm33570-201ENSMUST00000207608 1254 ntTSL 5 BASIC13.96□□□□□ -0.17
Hoxc9P09633 Gm44917-201ENSMUST00000208798 520 ntBASIC13.96□□□□□ -0.17
Hoxc9P09633 Gm6426-201ENSMUST00000209048 854 ntBASIC13.96□□□□□ -0.17
Hoxc9P09633 Gm45308-201ENSMUST00000210610 415 ntBASIC13.96□□□□□ -0.17
Hoxc9P09633 AC122824.1-201ENSMUST00000221705 828 ntTSL 3 BASIC13.96□□□□□ -0.17
Hoxc9P09633 AC154436.1-201ENSMUST00000227272 782 ntBASIC13.96□□□□□ -0.17
Hoxc9P09633 Ndufc1-201ENSMUST00000038108 1249 ntAPPRIS P1 TSL 1 (best) BASIC13.96□□□□□ -0.17
Hoxc9P09633 Tex46-201ENSMUST00000046647 683 ntAPPRIS P1 TSL 1 (best) BASIC13.96□□□□□ -0.17
Hoxc9P09633 Olfr1219-201ENSMUST00000099797 936 ntAPPRIS P1 BASIC13.96□□□□□ -0.17
Hoxc9P09633 Ciz1-202ENSMUST00000113331 2604 ntAPPRIS ALT2 TSL 5 BASIC13.96□□□□□ -0.17
Hoxc9P09633 Gm37697-201ENSMUST00000195680 1844 ntBASIC13.96□□□□□ -0.17
Hoxc9P09633 Dnmbp-201ENSMUST00000026209 4882 ntAPPRIS P2 TSL 2 BASIC13.96□□□□□ -0.17
Hoxc9P09633 4930430F08Rik-201ENSMUST00000054471 2564 ntAPPRIS P1 TSL 1 (best) BASIC13.96□□□□□ -0.17
Hoxc9P09633 A1cf-204ENSMUST00000224564 1432 ntBASIC13.96□□□□□ -0.18
Hoxc9P09633 Brat1-201ENSMUST00000041588 3333 ntAPPRIS P3 TSL 1 (best) BASIC13.96□□□□□ -0.18
Hoxc9P09633 Gtf2ird1-206ENSMUST00000111244 3461 ntAPPRIS ALT2 TSL 1 (best) BASIC13.96□□□□□ -0.18
Hoxc9P09633 Col18a1-203ENSMUST00000105409 4791 ntAPPRIS P2 TSL 1 (best) BASIC13.96□□□□□ -0.18
Hoxc9P09633 Col9a1-202ENSMUST00000088349 3059 ntTSL 1 (best) BASIC13.96□□□□□ -0.18
Hoxc9P09633 Tra2b-204ENSMUST00000161286 3403 ntAPPRIS P1 TSL 1 (best) BASIC13.96□□□□□ -0.18
Hoxc9P09633 Sgk2-201ENSMUST00000018012 2693 ntAPPRIS P1 TSL 1 (best) BASIC13.96□□□□□ -0.18
Hoxc9P09633 Trappc9-204ENSMUST00000170633 4688 ntAPPRIS ALT2 TSL 1 (best) BASIC13.96□□□□□ -0.18
Hoxc9P09633 Plekha7-202ENSMUST00000181981 4633 ntTSL 1 (best) BASIC13.95□□□□□ -0.18
Hoxc9P09633 Nfib-203ENSMUST00000107245 9116 ntTSL 1 (best) BASIC13.95□□□□□ -0.18
Hoxc9P09633 Mylk3-202ENSMUST00000121972 2407 ntAPPRIS ALT2 TSL 1 (best) BASIC13.95□□□□□ -0.18
Hoxc9P09633 Gm43625-201ENSMUST00000199177 1539 ntBASIC13.95□□□□□ -0.18
Hoxc9P09633 Gm33677-201ENSMUST00000220074 2765 ntTSL 1 (best) BASIC13.95□□□□□ -0.18
Hoxc9P09633 Parp10-202ENSMUST00000165738 3367 ntAPPRIS P1 TSL 1 (best) BASIC13.95□□□□□ -0.18
Hoxc9P09633 Ric3-201ENSMUST00000055993 5281 ntAPPRIS P3 TSL 1 (best) BASIC13.95□□□□□ -0.18
Hoxc9P09633 Ncoa3-202ENSMUST00000109252 5757 ntAPPRIS ALT2 TSL 5 BASIC13.95□□□□□ -0.18
Hoxc9P09633 Bcl11a-203ENSMUST00000109516 2329 ntTSL 1 (best) BASIC13.95□□□□□ -0.18
Hoxc9P09633 Picalm-201ENSMUST00000049537 3528 ntTSL 1 (best) BASIC13.95□□□□□ -0.18
Hoxc9P09633 Rapgef2-201ENSMUST00000118100 6573 ntTSL 1 (best) BASIC13.95□□□□□ -0.18
Hoxc9P09633 Gm12498-201ENSMUST00000138374 2458 ntTSL 1 (best) BASIC13.95□□□□□ -0.18
Hoxc9P09633 Mir598-201ENSMUST00000102094 79 ntBASIC13.95□□□□□ -0.18
Hoxc9P09633 Mir744-201ENSMUST00000103261 100 ntBASIC13.95□□□□□ -0.18
Hoxc9P09633 Cep164-201ENSMUST00000117194 5541 ntAPPRIS P2 TSL 5 BASIC13.95□□□□□ -0.18
Hoxc9P09633 Gm13281-201ENSMUST00000120871 567 ntBASIC13.95□□□□□ -0.18
Hoxc9P09633 Gm14633-201ENSMUST00000121152 470 ntBASIC13.95□□□□□ -0.18
Hoxc9P09633 1700095J12Rik-201ENSMUST00000124620 737 ntTSL 1 (best) BASIC13.95□□□□□ -0.18
Hoxc9P09633 Aif1l-207ENSMUST00000148056 670 ntTSL 5 BASIC13.95□□□□□ -0.18
Hoxc9P09633 Gm13267-202ENSMUST00000150099 281 ntTSL 2 BASIC13.95□□□□□ -0.18
Hoxc9P09633 Gm7805-201ENSMUST00000154348 448 ntBASIC13.95□□□□□ -0.18
Hoxc9P09633 Gm22994-201ENSMUST00000175422 82 ntBASIC13.95□□□□□ -0.18
Hoxc9P09633 D330041H03Rik-202ENSMUST00000180390 411 ntTSL 2 BASIC13.95□□□□□ -0.18
Hoxc9P09633 Gm28916-201ENSMUST00000186988 699 ntBASIC13.95□□□□□ -0.18
Hoxc9P09633 Gm42208-201ENSMUST00000198215 670 ntTSL 3 BASIC13.95□□□□□ -0.18
Hoxc9P09633 Gm17936-201ENSMUST00000199413 988 ntBASIC13.95□□□□□ -0.18
Hoxc9P09633 Smim23-201ENSMUST00000020508 620 ntAPPRIS P1 TSL 1 (best) BASIC13.95□□□□□ -0.18
Hoxc9P09633 Gm18256-201ENSMUST00000209087 907 ntBASIC13.95□□□□□ -0.18
Hoxc9P09633 Fut1-202ENSMUST00000209379 1116 ntAPPRIS ALT2 TSL 1 (best) BASIC13.95□□□□□ -0.18
Hoxc9P09633 Gm45783-201ENSMUST00000210877 656 ntAPPRIS P1 TSL 3 BASIC13.95□□□□□ -0.18
Hoxc9P09633 CT030011.1-201ENSMUST00000221959 264 ntTSL 5 BASIC13.95□□□□□ -0.18
Hoxc9P09633 AC154431.1-201ENSMUST00000224910 880 ntBASIC13.95□□□□□ -0.18
Hoxc9P09633 Clrn1-201ENSMUST00000051408 1204 ntAPPRIS P1 TSL 1 (best) BASIC13.95□□□□□ -0.18
Hoxc9P09633 Gm8618-201ENSMUST00000097570 432 ntBASIC13.95□□□□□ -0.18
Hoxc9P09633 Gm21142-201ENSMUST00000179999 2604 ntBASIC13.95□□□□□ -0.18
Hoxc9P09633 Slc10a4-202ENSMUST00000201304 1419 ntTSL 1 (best) BASIC13.95□□□□□ -0.18
Hoxc9P09633 Gm12462-201ENSMUST00000140826 3056 ntTSL 1 (best) BASIC13.95□□□□□ -0.18
Hoxc9P09633 Rab14-201ENSMUST00000028238 3081 ntAPPRIS P1 TSL 1 (best) BASIC13.95□□□□□ -0.18
Hoxc9P09633 Sh3tc2-201ENSMUST00000051720 4536 ntAPPRIS P1 TSL 2 BASIC13.95□□□□□ -0.18
Hoxc9P09633 Celf3-213ENSMUST00000199775 2351 ntAPPRIS ALT1 TSL 5 BASIC13.95□□□□□ -0.18
Hoxc9P09633 Arhgap27-204ENSMUST00000107024 3976 ntAPPRIS ALT2 TSL 5 BASIC13.95□□□□□ -0.18
Hoxc9P09633 Satb1-204ENSMUST00000133574 3461 ntAPPRIS P2 TSL 1 (best) BASIC13.95□□□□□ -0.18
Hoxc9P09633 Smpd4-218ENSMUST00000170273 2166 ntTSL 5 BASIC13.95□□□□□ -0.18
Hoxc9P09633 Hyal2-206ENSMUST00000195681 2968 ntBASIC13.95□□□□□ -0.18
Hoxc9P09633 Shc1-201ENSMUST00000039110 3250 ntAPPRIS P3 TSL 1 (best) BASIC13.95□□□□□ -0.18
Hoxc9P09633 4931423N10Rik-201ENSMUST00000028113 1842 ntAPPRIS P1 TSL 1 (best) BASIC13.94□□□□□ -0.18
Hoxc9P09633 Gfm2-202ENSMUST00000042084 3074 ntTSL 1 (best) BASIC13.94□□□□□ -0.18
Hoxc9P09633 Dnaja1-201ENSMUST00000030118 3376 ntAPPRIS P1 TSL 1 (best) BASIC13.94□□□□□ -0.18
Hoxc9P09633 Gnas-209ENSMUST00000109088 3519 ntTSL 1 (best) BASIC13.94□□□□□ -0.18
Hoxc9P09633 Gnas-201ENSMUST00000080493 3519 ntTSL 1 (best) BASIC13.94□□□□□ -0.18
Hoxc9P09633 Gm8968-201ENSMUST00000199133 1303 ntBASIC13.94□□□□□ -0.18
Hoxc9P09633 Plcd4-204ENSMUST00000113747 2720 ntAPPRIS ALT2 TSL 1 (best) BASIC13.94□□□□□ -0.18
Hoxc9P09633 Dclk2-209ENSMUST00000195561 3486 ntAPPRIS ALT2 TSL 1 (best) BASIC13.94□□□□□ -0.18
Hoxc9P09633 Myo18a-211ENSMUST00000130627 6202 ntAPPRIS ALT2 TSL 5 BASIC13.94□□□□□ -0.18
Hoxc9P09633 Trim23-201ENSMUST00000022225 3416 ntAPPRIS P1 TSL 1 (best) BASIC13.94□□□□□ -0.18
Hoxc9P09633 Cul9-201ENSMUST00000066026 7818 ntAPPRIS ALT2 TSL 5 BASIC13.94□□□□□ -0.18
Hoxc9P09633 Uhrf1bp1-201ENSMUST00000114849 8584 ntAPPRIS P1 TSL 1 (best) BASIC13.94□□□□□ -0.18
Hoxc9P09633 Timeless-201ENSMUST00000055539 4457 ntAPPRIS P3 TSL 1 (best) BASIC13.94□□□□□ -0.18
Hoxc9P09633 Grm1-203ENSMUST00000105561 4435 ntAPPRIS ALT2 TSL 1 (best) BASIC13.94□□□□□ -0.18
Hoxc9P09633 Pex13-ps-201ENSMUST00000118184 1157 ntBASIC13.94□□□□□ -0.18
Hoxc9P09633 Gm13777-201ENSMUST00000118208 345 ntBASIC13.94□□□□□ -0.18
Hoxc9P09633 Gm14650-201ENSMUST00000120400 889 ntBASIC13.94□□□□□ -0.18
Hoxc9P09633 Gm25394-201ENSMUST00000157338 133 ntBASIC13.94□□□□□ -0.18
Hoxc9P09633 Gm17782-201ENSMUST00000174345 880 ntBASIC13.94□□□□□ -0.18
Hoxc9P09633 Gm26716-201ENSMUST00000181227 415 ntTSL 5 BASIC13.94□□□□□ -0.18
Retrieved 100 of 76,532 protein–RNA pairs in 63.1 ms