Protein–RNA interactions for Protein: J3QP07

B020004C17Rik, RIKEN cDNA B020004C17 gene, mousemouse

Predictions only

Length 232 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
B020004C17RikJ3QP07 BB187690-201ENSMUST00000198619 1176 ntBASIC12.12□□□□□ -0.47
B020004C17RikJ3QP07 1700047G03Rik-205ENSMUST00000227822 1048 ntBASIC12.12□□□□□ -0.47
B020004C17RikJ3QP07 Dntt-201ENSMUST00000051806 2128 ntTSL 1 (best) BASIC12.12□□□□□ -0.47
B020004C17RikJ3QP07 Terb1-201ENSMUST00000064576 2950 ntAPPRIS P1 TSL 1 (best) BASIC12.12□□□□□ -0.47
B020004C17RikJ3QP07 Tnnt3-202ENSMUST00000078497 1067 ntAPPRIS ALT2 TSL 1 (best) BASIC12.12□□□□□ -0.47
B020004C17RikJ3QP07 Col18a1-203ENSMUST00000105409 4791 ntAPPRIS P2 TSL 1 (best) BASIC12.12□□□□□ -0.47
B020004C17RikJ3QP07 Foxl2os-201ENSMUST00000181706 3095 ntTSL 2 BASIC12.12□□□□□ -0.47
B020004C17RikJ3QP07 Onecut1-201ENSMUST00000056006 3957 ntAPPRIS P1 TSL 1 (best) BASIC12.12□□□□□ -0.47
B020004C17RikJ3QP07 Cd276-202ENSMUST00000165365 3603 ntAPPRIS P1 TSL 1 (best) BASIC12.12□□□□□ -0.47
B020004C17RikJ3QP07 Ebf3-202ENSMUST00000106118 3736 ntAPPRIS ALT1 TSL 5 BASIC12.12□□□□□ -0.47
B020004C17RikJ3QP07 Sgcz-201ENSMUST00000118896 2389 ntAPPRIS P1 TSL 1 (best) BASIC12.12□□□□□ -0.47
B020004C17RikJ3QP07 Sass6-204ENSMUST00000197335 2458 ntTSL 1 (best) BASIC12.12□□□□□ -0.47
B020004C17RikJ3QP07 Plcd1-201ENSMUST00000010804 2657 ntAPPRIS P1 TSL 1 (best) BASIC12.12□□□□□ -0.47
B020004C17RikJ3QP07 Elf2-206ENSMUST00000163748 2656 ntAPPRIS P3 TSL 1 (best) BASIC12.12□□□□□ -0.47
B020004C17RikJ3QP07 Prrxl1-204ENSMUST00000189022 2985 ntAPPRIS P1 TSL 1 (best) BASIC12.12□□□□□ -0.47
B020004C17RikJ3QP07 Gm34425-201ENSMUST00000216269 3079 ntTSL 5 BASIC12.12□□□□□ -0.47
B020004C17RikJ3QP07 Lypd6-202ENSMUST00000112712 3495 ntAPPRIS P1 TSL 5 BASIC12.12□□□□□ -0.47
B020004C17RikJ3QP07 Dst-213ENSMUST00000183302 8788 ntTSL 1 (best) BASIC12.12□□□□□ -0.47
B020004C17RikJ3QP07 Atp6v1c2-202ENSMUST00000095820 1549 ntTSL 1 (best) BASIC12.11□□□□□ -0.47
B020004C17RikJ3QP07 Atl3-202ENSMUST00000170373 6474 ntAPPRIS ALT2 TSL 5 BASIC12.11□□□□□ -0.47
B020004C17RikJ3QP07 Gm43014-201ENSMUST00000198568 2443 ntBASIC12.11□□□□□ -0.47
B020004C17RikJ3QP07 Ank2-221ENSMUST00000182994 2715 ntTSL 1 (best) BASIC12.11□□□□□ -0.47
B020004C17RikJ3QP07 Tfe3-204ENSMUST00000115677 2943 ntTSL 1 (best) BASIC12.11□□□□□ -0.47
B020004C17RikJ3QP07 Gripap1-203ENSMUST00000115675 3015 ntAPPRIS ALT2 TSL 1 (best) BASIC12.11□□□□□ -0.47
B020004C17RikJ3QP07 Prpf40b-208ENSMUST00000136980 3047 ntAPPRIS ALT2 TSL 5 BASIC12.11□□□□□ -0.47
B020004C17RikJ3QP07 Lipo2-201ENSMUST00000147153 3562 ntAPPRIS P1 TSL 5 BASIC12.11□□□□□ -0.47
B020004C17RikJ3QP07 Hoxa1-201ENSMUST00000000964 2251 ntAPPRIS P1 TSL 1 (best) BASIC12.11□□□□□ -0.47
B020004C17RikJ3QP07 Ccm2-202ENSMUST00000109721 1551 ntTSL 5 BASIC12.11□□□□□ -0.47
B020004C17RikJ3QP07 Gm26912-201ENSMUST00000180988 1483 ntTSL 1 (best) BASIC12.11□□□□□ -0.47
B020004C17RikJ3QP07 Atxn2l-203ENSMUST00000167759 4023 ntAPPRIS ALT2 TSL 1 (best) BASIC12.11□□□□□ -0.47
B020004C17RikJ3QP07 Spaca9-201ENSMUST00000102877 671 ntAPPRIS P1 TSL 1 (best) BASIC12.11□□□□□ -0.47
B020004C17RikJ3QP07 Rab29-202ENSMUST00000112386 1202 ntAPPRIS P1 TSL 1 (best) BASIC12.11□□□□□ -0.47
B020004C17RikJ3QP07 Gm11235-201ENSMUST00000117763 333 ntBASIC12.11□□□□□ -0.47
B020004C17RikJ3QP07 Gm11929-201ENSMUST00000118175 945 ntBASIC12.11□□□□□ -0.47
B020004C17RikJ3QP07 Gm14829-201ENSMUST00000121499 1138 ntBASIC12.11□□□□□ -0.47
B020004C17RikJ3QP07 Pla2g1b-204ENSMUST00000145785 419 ntTSL 5 BASIC12.11□□□□□ -0.47
B020004C17RikJ3QP07 Gm42617-201ENSMUST00000197640 1229 ntBASIC12.11□□□□□ -0.47
B020004C17RikJ3QP07 Gm45090-201ENSMUST00000208775 1148 ntBASIC12.11□□□□□ -0.47
B020004C17RikJ3QP07 AC113291.2-201ENSMUST00000215490 1205 ntTSL 1 (best) BASIC12.11□□□□□ -0.47
B020004C17RikJ3QP07 AC130217.1-201ENSMUST00000224146 909 ntBASIC12.11□□□□□ -0.47
B020004C17RikJ3QP07 2010109A12Rik-201ENSMUST00000031330 549 ntAPPRIS P1 TSL 1 (best) BASIC12.11□□□□□ -0.47
B020004C17RikJ3QP07 B3gat2-201ENSMUST00000063663 5655 ntAPPRIS P1 TSL 1 (best) BASIC12.11□□□□□ -0.47
B020004C17RikJ3QP07 Ncapd3-201ENSMUST00000073127 5499 ntAPPRIS P2 TSL 5 BASIC12.11□□□□□ -0.47
B020004C17RikJ3QP07 Cdc42ep4-201ENSMUST00000053536 3008 ntAPPRIS P1 TSL 1 (best) BASIC12.11□□□□□ -0.47
B020004C17RikJ3QP07 Wdr81-204ENSMUST00000173320 6908 ntAPPRIS P1 TSL 5 BASIC12.11□□□□□ -0.47
B020004C17RikJ3QP07 Atic-201ENSMUST00000027384 2845 ntAPPRIS P1 TSL 1 (best) BASIC12.11□□□□□ -0.47
B020004C17RikJ3QP07 Cpt1c-206ENSMUST00000212836 2716 ntAPPRIS P1 TSL 1 (best) BASIC12.11□□□□□ -0.47
B020004C17RikJ3QP07 AC164441.2-201ENSMUST00000220818 2746 ntTSL 1 (best) BASIC12.11□□□□□ -0.47
B020004C17RikJ3QP07 Chtop-201ENSMUST00000001043 3257 ntTSL 1 (best) BASIC12.11□□□□□ -0.47
B020004C17RikJ3QP07 Als2cl-206ENSMUST00000155014 5150 ntAPPRIS P1 TSL 1 (best) BASIC12.11□□□□□ -0.47
B020004C17RikJ3QP07 Plekhb1-205ENSMUST00000107046 2793 ntAPPRIS ALT1 TSL 1 (best) BASIC12.11□□□□□ -0.47
B020004C17RikJ3QP07 Gm43375-201ENSMUST00000196705 2480 ntBASIC12.11□□□□□ -0.47
B020004C17RikJ3QP07 Adgrl3-214ENSMUST00000120445 5230 ntTSL 5 BASIC12.11□□□□□ -0.47
B020004C17RikJ3QP07 Gm19299-202ENSMUST00000215724 1435 ntTSL 1 (best) BASIC12.11□□□□□ -0.47
B020004C17RikJ3QP07 Sept11-201ENSMUST00000074733 5028 ntAPPRIS P3 TSL 1 (best) BASIC12.11□□□□□ -0.47
B020004C17RikJ3QP07 Mrpl24-202ENSMUST00000119968 1339 ntAPPRIS P1 TSL 1 (best) BASIC12.11□□□□□ -0.47
B020004C17RikJ3QP07 Tob2-201ENSMUST00000050467 3994 ntAPPRIS P1 TSL 1 (best) BASIC12.11□□□□□ -0.47
B020004C17RikJ3QP07 Cfi-201ENSMUST00000077918 2079 ntAPPRIS P1 TSL 1 (best) BASIC12.1□□□□□ -0.47
B020004C17RikJ3QP07 Rbm10-205ENSMUST00000115375 3698 ntAPPRIS ALT2 TSL 1 (best) BASIC12.1□□□□□ -0.47
B020004C17RikJ3QP07 Mindy1-201ENSMUST00000039537 2800 ntTSL 1 (best) BASIC12.1□□□□□ -0.47
B020004C17RikJ3QP07 Gm26686-201ENSMUST00000181951 3467 ntTSL 1 (best) BASIC12.1□□□□□ -0.47
B020004C17RikJ3QP07 Armcx3-203ENSMUST00000086884 3488 ntAPPRIS P1 TSL 5 BASIC12.1□□□□□ -0.47
B020004C17RikJ3QP07 Spata2-201ENSMUST00000057627 4012 ntAPPRIS P1 TSL 1 (best) BASIC12.1□□□□□ -0.47
B020004C17RikJ3QP07 Rab11fip5-201ENSMUST00000060837 4035 ntAPPRIS P3 TSL 1 (best) BASIC12.1□□□□□ -0.47
B020004C17RikJ3QP07 Ptprr-206ENSMUST00000148731 2511 ntAPPRIS ALT2 TSL 5 BASIC12.1□□□□□ -0.47
B020004C17RikJ3QP07 Nnt-203ENSMUST00000109204 3198 ntTSL 5 BASIC12.1□□□□□ -0.47
B020004C17RikJ3QP07 Runx1-201ENSMUST00000023673 5861 ntAPPRIS ALT2 TSL 1 (best) BASIC12.1□□□□□ -0.47
B020004C17RikJ3QP07 Foxk1-201ENSMUST00000072837 7439 ntAPPRIS P1 TSL 1 (best) BASIC12.1□□□□□ -0.47
B020004C17RikJ3QP07 Klf10-203ENSMUST00000227920 2144 ntBASIC12.1□□□□□ -0.47
B020004C17RikJ3QP07 Mmel1-203ENSMUST00000105634 2669 ntAPPRIS ALT2 TSL 5 BASIC12.1□□□□□ -0.47
B020004C17RikJ3QP07 Uaca-201ENSMUST00000050183 4428 ntAPPRIS P2 TSL 1 (best) BASIC12.1□□□□□ -0.47
B020004C17RikJ3QP07 Dnmbp-201ENSMUST00000026209 4882 ntAPPRIS P2 TSL 2 BASIC12.1□□□□□ -0.47
B020004C17RikJ3QP07 Apold1-201ENSMUST00000167323 3567 ntAPPRIS P1 TSL 2 BASIC12.1□□□□□ -0.47
B020004C17RikJ3QP07 Spryd7-201ENSMUST00000022497 4002 ntAPPRIS P1 TSL 1 (best) BASIC12.1□□□□□ -0.47
B020004C17RikJ3QP07 Mllt6-202ENSMUST00000107586 7206 ntAPPRIS ALT2 TSL 5 BASIC12.1□□□□□ -0.47
B020004C17RikJ3QP07 Nudt8-201ENSMUST00000155405 3904 ntAPPRIS P1 TSL 2 BASIC12.1□□□□□ -0.47
B020004C17RikJ3QP07 Mir598-201ENSMUST00000102094 79 ntBASIC12.1□□□□□ -0.47
B020004C17RikJ3QP07 Thegl-203ENSMUST00000118941 746 ntTSL 3 BASIC12.1□□□□□ -0.47
B020004C17RikJ3QP07 Gm6276-201ENSMUST00000120159 579 ntBASIC12.1□□□□□ -0.47
B020004C17RikJ3QP07 Shf-205ENSMUST00000121237 882 ntTSL 3 BASIC12.1□□□□□ -0.47
B020004C17RikJ3QP07 Gm11521-201ENSMUST00000143302 329 ntTSL 3 BASIC12.1□□□□□ -0.47
B020004C17RikJ3QP07 Ddt-201ENSMUST00000001716 649 ntAPPRIS P1 TSL 1 (best) BASIC12.1□□□□□ -0.47
B020004C17RikJ3QP07 Rhox12-203ENSMUST00000183737 761 ntTSL 3 BASIC12.1□□□□□ -0.47
B020004C17RikJ3QP07 6030460B20Rik-201ENSMUST00000191764 1058 ntBASIC12.1□□□□□ -0.47
B020004C17RikJ3QP07 Gm5190-201ENSMUST00000192434 357 ntBASIC12.1□□□□□ -0.47
B020004C17RikJ3QP07 Gm5543-201ENSMUST00000193329 1091 ntBASIC12.1□□□□□ -0.47
B020004C17RikJ3QP07 Gm8625-201ENSMUST00000194185 1077 ntBASIC12.1□□□□□ -0.47
B020004C17RikJ3QP07 Gm43997-201ENSMUST00000203986 1005 ntBASIC12.1□□□□□ -0.47
B020004C17RikJ3QP07 Psenen-203ENSMUST00000207747 669 ntAPPRIS P1 TSL 2 BASIC12.1□□□□□ -0.47
B020004C17RikJ3QP07 Gm6426-201ENSMUST00000209048 854 ntBASIC12.1□□□□□ -0.47
B020004C17RikJ3QP07 Tmem238l-203ENSMUST00000211300 930 ntAPPRIS P1 TSL 3 BASIC12.1□□□□□ -0.47
B020004C17RikJ3QP07 Gm3791-201ENSMUST00000220790 768 ntBASIC12.1□□□□□ -0.47
B020004C17RikJ3QP07 AC174647.1-201ENSMUST00000227419 1271 ntBASIC12.1□□□□□ -0.47
B020004C17RikJ3QP07 AC163646.3-202ENSMUST00000228685 691 ntBASIC12.1□□□□□ -0.47
B020004C17RikJ3QP07 Gm5148-202ENSMUST00000099128 1098 ntAPPRIS P1 TSL 1 (best) BASIC12.1□□□□□ -0.47
B020004C17RikJ3QP07 Unk-201ENSMUST00000021116 3735 ntAPPRIS P3 TSL 1 (best) BASIC12.1□□□□□ -0.47
B020004C17RikJ3QP07 BC052040-201ENSMUST00000110918 2735 ntAPPRIS P1 TSL 1 (best) BASIC12.1□□□□□ -0.47
B020004C17RikJ3QP07 Slc43a1-204ENSMUST00000121114 3089 ntAPPRIS ALT2 TSL 1 (best) BASIC12.1□□□□□ -0.47
B020004C17RikJ3QP07 Ddah1-201ENSMUST00000029845 3764 ntAPPRIS P1 TSL 1 (best) BASIC12.1□□□□□ -0.47
B020004C17RikJ3QP07 Gm12829-201ENSMUST00000146346 2434 ntTSL 1 (best) BASIC12.1□□□□□ -0.47
Retrieved 100 of 76,532 protein–RNA pairs in 39.8 ms