Protein–RNA interactions for Protein: Q6ZPL9

Ddx55, ATP-dependent RNA helicase DDX55, mousemouse

Known RBP Predictions only

Length 600 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ddx55Q6ZPL9 Gm12316-201ENSMUST00000125853 406 ntTSL 5 BASIC12.35□□□□□ -0.43
Ddx55Q6ZPL9 Rptoros-201ENSMUST00000127450 1174 ntTSL 1 (best) BASIC12.35□□□□□ -0.43
Ddx55Q6ZPL9 Gm12254-201ENSMUST00000134617 471 ntBASIC12.35□□□□□ -0.43
Ddx55Q6ZPL9 Gm15015-201ENSMUST00000135491 636 ntTSL 3 BASIC12.35□□□□□ -0.43
Ddx55Q6ZPL9 Gm14717-201ENSMUST00000140450 649 ntTSL 3 BASIC12.35□□□□□ -0.43
Ddx55Q6ZPL9 Gm15020-201ENSMUST00000147142 636 ntTSL 3 BASIC12.35□□□□□ -0.43
Ddx55Q6ZPL9 Gm16268-201ENSMUST00000159445 1157 ntTSL 1 (best) BASIC12.35□□□□□ -0.43
Ddx55Q6ZPL9 2410124H12Rik-201ENSMUST00000160494 706 ntTSL 1 (best) BASIC12.35□□□□□ -0.43
Ddx55Q6ZPL9 Gm16587-201ENSMUST00000161943 863 ntTSL 1 (best) BASIC12.35□□□□□ -0.43
Ddx55Q6ZPL9 Gm4868-201ENSMUST00000164138 789 ntBASIC12.35□□□□□ -0.43
Ddx55Q6ZPL9 Gm29200-201ENSMUST00000188118 1085 ntTSL 1 (best) BASIC12.35□□□□□ -0.43
Ddx55Q6ZPL9 Gm37009-201ENSMUST00000193297 361 ntBASIC12.35□□□□□ -0.43
Ddx55Q6ZPL9 1700113A16Rik-203ENSMUST00000200006 563 ntTSL 1 (best) BASIC12.35□□□□□ -0.43
Ddx55Q6ZPL9 Galc-201ENSMUST00000021390 3832 ntAPPRIS P1 TSL 1 (best) BASIC12.35□□□□□ -0.43
Ddx55Q6ZPL9 AC165092.1-201ENSMUST00000224018 486 ntBASIC12.35□□□□□ -0.43
Ddx55Q6ZPL9 Calm4-201ENSMUST00000042219 917 ntAPPRIS P1 BASIC12.35□□□□□ -0.43
Ddx55Q6ZPL9 Cst10-201ENSMUST00000047008 804 ntAPPRIS P1 TSL 1 (best) BASIC12.35□□□□□ -0.43
Ddx55Q6ZPL9 Atp6v1e2-201ENSMUST00000065758 1005 ntAPPRIS P1 TSL 1 (best) BASIC12.35□□□□□ -0.43
Ddx55Q6ZPL9 Mir341-201ENSMUST00000093593 96 ntBASIC12.35□□□□□ -0.43
Ddx55Q6ZPL9 4930566F21Rik-201ENSMUST00000201177 1535 ntTSL 1 (best) BASIC12.35□□□□□ -0.43
Ddx55Q6ZPL9 Dtl-201ENSMUST00000027933 4212 ntAPPRIS P1 TSL 1 (best) BASIC12.35□□□□□ -0.43
Ddx55Q6ZPL9 Eif5-212ENSMUST00000222375 3547 ntAPPRIS P2 TSL 1 (best) BASIC12.35□□□□□ -0.43
Ddx55Q6ZPL9 Irf6-201ENSMUST00000076521 4113 ntAPPRIS P1 TSL 1 (best) BASIC12.35□□□□□ -0.43
Ddx55Q6ZPL9 Lrp2-203ENSMUST00000100051 4359 ntTSL 1 (best) BASIC12.35□□□□□ -0.43
Ddx55Q6ZPL9 Lig1-201ENSMUST00000098814 3091 ntAPPRIS P1 TSL 5 BASIC12.35□□□□□ -0.43
Ddx55Q6ZPL9 Gm43622-201ENSMUST00000200140 2019 ntBASIC12.35□□□□□ -0.43
Ddx55Q6ZPL9 Oprm1-205ENSMUST00000078634 1695 ntTSL 1 (best) BASIC12.35□□□□□ -0.43
Ddx55Q6ZPL9 Arhgap4-203ENSMUST00000114405 6299 ntAPPRIS ALT2 TSL 5 BASIC12.35□□□□□ -0.43
Ddx55Q6ZPL9 S1pr1-201ENSMUST00000055676 3046 ntAPPRIS P1 TSL 1 (best) BASIC12.35□□□□□ -0.43
Ddx55Q6ZPL9 Grm5-201ENSMUST00000107263 3516 ntAPPRIS P3 TSL 1 (best) BASIC12.34□□□□□ -0.43
Ddx55Q6ZPL9 Lrrc61-201ENSMUST00000101436 2674 ntAPPRIS P1 TSL 1 (best) BASIC12.34□□□□□ -0.43
Ddx55Q6ZPL9 Dph5-202ENSMUST00000106505 1836 ntTSL 1 (best) BASIC12.34□□□□□ -0.43
Ddx55Q6ZPL9 Ints1-210ENSMUST00000200393 7070 ntAPPRIS P2 TSL 1 (best) BASIC12.34□□□□□ -0.43
Ddx55Q6ZPL9 6030407O03Rik-201ENSMUST00000189514 2094 ntTSL 1 (best) BASIC12.34□□□□□ -0.43
Ddx55Q6ZPL9 Mzf1-201ENSMUST00000069289 3597 ntTSL 1 (best) BASIC12.34□□□□□ -0.43
Ddx55Q6ZPL9 Mier1-205ENSMUST00000106858 4830 ntAPPRIS P3 TSL 1 (best) BASIC12.34□□□□□ -0.43
Ddx55Q6ZPL9 Hoxa9-201ENSMUST00000048680 3226 ntAPPRIS P1 TSL 1 (best) BASIC12.34□□□□□ -0.43
Ddx55Q6ZPL9 Etf1-201ENSMUST00000025218 3709 ntAPPRIS P1 TSL 1 (best) BASIC12.34□□□□□ -0.43
Ddx55Q6ZPL9 Akap3-202ENSMUST00000202574 2879 ntAPPRIS P1 TSL 5 BASIC12.34□□□□□ -0.43
Ddx55Q6ZPL9 Sin3b-201ENSMUST00000004494 4115 ntAPPRIS P1 TSL 1 (best) BASIC12.34□□□□□ -0.43
Ddx55Q6ZPL9 Cacna1g-210ENSMUST00000107792 7981 ntAPPRIS ALT2 TSL 5 BASIC12.34□□□□□ -0.43
Ddx55Q6ZPL9 Hlcs-201ENSMUST00000099512 4833 ntAPPRIS P2 TSL 1 (best) BASIC12.34□□□□□ -0.43
Ddx55Q6ZPL9 Nfe2l1-211ENSMUST00000167149 4596 ntAPPRIS P3 TSL 1 (best) BASIC12.34□□□□□ -0.43
Ddx55Q6ZPL9 Scgb1b29-201ENSMUST00000108094 282 ntAPPRIS P1 TSL 1 (best) BASIC12.34□□□□□ -0.43
Ddx55Q6ZPL9 Ccdc32-203ENSMUST00000110834 828 ntTSL 1 (best) BASIC12.34□□□□□ -0.43
Ddx55Q6ZPL9 Gm11235-201ENSMUST00000117763 333 ntBASIC12.34□□□□□ -0.43
Ddx55Q6ZPL9 Shf-205ENSMUST00000121237 882 ntTSL 3 BASIC12.34□□□□□ -0.43
Ddx55Q6ZPL9 Gm13393-201ENSMUST00000141935 396 ntTSL 5 BASIC12.34□□□□□ -0.43
Ddx55Q6ZPL9 Gm2474-201ENSMUST00000195162 559 ntBASIC12.34□□□□□ -0.43
Ddx55Q6ZPL9 Gm8828-201ENSMUST00000196786 1290 ntBASIC12.34□□□□□ -0.43
Ddx55Q6ZPL9 Rhoc-205ENSMUST00000196817 877 ntAPPRIS P1 TSL 3 BASIC12.34□□□□□ -0.43
Ddx55Q6ZPL9 4930573C15Rik-201ENSMUST00000197707 777 ntTSL 1 (best) BASIC12.34□□□□□ -0.43
Ddx55Q6ZPL9 Gm42208-201ENSMUST00000198215 670 ntTSL 3 BASIC12.34□□□□□ -0.43
Ddx55Q6ZPL9 Gm6370-202ENSMUST00000198912 1017 ntAPPRIS ALT2 TSL 3 BASIC12.34□□□□□ -0.43
Ddx55Q6ZPL9 Gm44304-201ENSMUST00000200509 145 ntBASIC12.34□□□□□ -0.43
Ddx55Q6ZPL9 Gm45875-201ENSMUST00000212178 781 ntTSL 3 BASIC12.34□□□□□ -0.43
Ddx55Q6ZPL9 AC163646.3-202ENSMUST00000228685 691 ntBASIC12.34□□□□□ -0.43
Ddx55Q6ZPL9 Tas2r135-201ENSMUST00000070178 1093 ntAPPRIS P1 BASIC12.34□□□□□ -0.43
Ddx55Q6ZPL9 Mir194-2-201ENSMUST00000083648 86 ntBASIC12.34□□□□□ -0.43
Ddx55Q6ZPL9 Terf2ip-201ENSMUST00000052138 3560 ntAPPRIS P1 TSL 1 (best) BASIC12.34□□□□□ -0.43
Ddx55Q6ZPL9 Tanc2-202ENSMUST00000100330 11855 ntAPPRIS P1 TSL 5 BASIC12.34□□□□□ -0.43
Ddx55Q6ZPL9 Rin2-202ENSMUST00000110005 4641 ntAPPRIS ALT2 TSL 5 BASIC12.34□□□□□ -0.43
Ddx55Q6ZPL9 Spef2-203ENSMUST00000159368 1422 ntTSL 1 (best) BASIC12.34□□□□□ -0.43
Ddx55Q6ZPL9 Acsm1-201ENSMUST00000047929 2083 ntAPPRIS P1 TSL 1 (best) BASIC12.34□□□□□ -0.43
Ddx55Q6ZPL9 Cpt1c-206ENSMUST00000212836 2716 ntAPPRIS P1 TSL 1 (best) BASIC12.34□□□□□ -0.43
Ddx55Q6ZPL9 Slc13a5-205ENSMUST00000208056 3111 ntTSL 5 BASIC12.34□□□□□ -0.43
Ddx55Q6ZPL9 Ccdc114-201ENSMUST00000038720 2460 ntAPPRIS P2 TSL 1 (best) BASIC12.34□□□□□ -0.43
Ddx55Q6ZPL9 Fam177a-201ENSMUST00000177768 3922 ntAPPRIS P1 TSL 1 (best) BASIC12.34□□□□□ -0.43
Ddx55Q6ZPL9 Olfr283-202ENSMUST00000215830 2392 ntAPPRIS P1 TSL 5 BASIC12.34□□□□□ -0.43
Ddx55Q6ZPL9 Col14a1-202ENSMUST00000110217 6457 ntAPPRIS ALT1 TSL 5 BASIC12.34□□□□□ -0.43
Ddx55Q6ZPL9 Camta2-204ENSMUST00000108545 4377 ntTSL 1 (best) BASIC12.34□□□□□ -0.43
Ddx55Q6ZPL9 Camta2-206ENSMUST00000120261 4398 ntTSL 5 BASIC12.34□□□□□ -0.43
Ddx55Q6ZPL9 Dntt-201ENSMUST00000051806 2128 ntTSL 1 (best) BASIC12.34□□□□□ -0.43
Ddx55Q6ZPL9 Egfem1-202ENSMUST00000119598 2687 ntAPPRIS P4 TSL 1 (best) BASIC12.34□□□□□ -0.43
Ddx55Q6ZPL9 Cpvl-202ENSMUST00000203101 1488 ntTSL 1 (best) BASIC12.34□□□□□ -0.43
Ddx55Q6ZPL9 Gm45663-201ENSMUST00000210429 1632 ntBASIC12.33□□□□□ -0.43
Ddx55Q6ZPL9 Nono-201ENSMUST00000033673 2562 ntAPPRIS P1 TSL 1 (best) BASIC12.33□□□□□ -0.43
Ddx55Q6ZPL9 Cct3-208ENSMUST00000168062 1943 ntTSL 1 (best) BASIC12.33□□□□□ -0.44
Ddx55Q6ZPL9 Poc1a-211ENSMUST00000217213 1398 ntTSL 5 BASIC12.33□□□□□ -0.44
Ddx55Q6ZPL9 Pcdh8-204ENSMUST00000195355 3704 ntAPPRIS ALT2 TSL 1 (best) BASIC12.33□□□□□ -0.44
Ddx55Q6ZPL9 Kcnt1-212ENSMUST00000197917 3711 ntAPPRIS ALT2 TSL 5 BASIC12.33□□□□□ -0.44
Ddx55Q6ZPL9 Prdx2-201ENSMUST00000005292 1500 ntAPPRIS P1 TSL 1 (best) BASIC12.33□□□□□ -0.44
Ddx55Q6ZPL9 Matr3-216ENSMUST00000190653 1846 ntTSL 5 BASIC12.33□□□□□ -0.44
Ddx55Q6ZPL9 Shtn1-201ENSMUST00000047511 4081 ntAPPRIS P4 TSL 1 (best) BASIC12.33□□□□□ -0.44
Ddx55Q6ZPL9 Cav2-203ENSMUST00000115462 694 ntTSL 5 BASIC12.33□□□□□ -0.44
Ddx55Q6ZPL9 Gm16518-201ENSMUST00000117960 508 ntBASIC12.33□□□□□ -0.44
Ddx55Q6ZPL9 Gm14571-201ENSMUST00000118292 570 ntBASIC12.33□□□□□ -0.44
Ddx55Q6ZPL9 Gm11521-201ENSMUST00000143302 329 ntTSL 3 BASIC12.33□□□□□ -0.44
Ddx55Q6ZPL9 H2al1e-201ENSMUST00000178979 494 ntAPPRIS P1 BASIC12.33□□□□□ -0.44
Ddx55Q6ZPL9 Gm26750-201ENSMUST00000181718 711 ntTSL 5 BASIC12.33□□□□□ -0.44
Ddx55Q6ZPL9 Scgb2b27-203ENSMUST00000185399 702 ntAPPRIS ALT2 TSL 2 BASIC12.33□□□□□ -0.44
Ddx55Q6ZPL9 H2al1b-201ENSMUST00000189531 495 ntAPPRIS P1 BASIC12.33□□□□□ -0.44
Ddx55Q6ZPL9 Gm21631-201ENSMUST00000195041 754 ntBASIC12.33□□□□□ -0.44
Ddx55Q6ZPL9 Gm42617-201ENSMUST00000197640 1229 ntBASIC12.33□□□□□ -0.44
Ddx55Q6ZPL9 Ighv1-86-201ENSMUST00000200562 353 ntBASIC12.33□□□□□ -0.44
Ddx55Q6ZPL9 Mylpf-206ENSMUST00000206772 653 ntTSL 3 BASIC12.33□□□□□ -0.44
Ddx55Q6ZPL9 Gm29328-212ENSMUST00000209182 1168 ntTSL 5 BASIC12.33□□□□□ -0.44
Ddx55Q6ZPL9 AC165260.2-201ENSMUST00000225371 395 ntBASIC12.33□□□□□ -0.44
Ddx55Q6ZPL9 Supt4a-201ENSMUST00000093955 706 ntAPPRIS P1 TSL 1 (best) BASIC12.33□□□□□ -0.44
Ddx55Q6ZPL9 Gm10617-201ENSMUST00000098368 1172 ntBASIC12.33□□□□□ -0.44
Retrieved 100 of 76,532 protein–RNA pairs in 59.4 ms