Protein–RNA interactions for Protein: P82350

Sgca, Alpha-sarcoglycan, mousemouse

Predictions only

Length 387 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SgcaP82350 Dio2-201ENSMUST00000082432 5815 ntAPPRIS P1 TSL 1 (best) BASIC9.07□□□□□ -0.96
SgcaP82350 Ubap2l-215ENSMUST00000198322 3385 ntTSL 1 (best) BASIC9.07□□□□□ -0.96
SgcaP82350 Ccl1-202ENSMUST00000108189 514 ntAPPRIS P1 TSL 1 (best) BASIC9.07□□□□□ -0.96
SgcaP82350 Gsg1-202ENSMUST00000111909 1087 ntAPPRIS ALT2 TSL 5 BASIC9.07□□□□□ -0.96
SgcaP82350 Hopx-202ENSMUST00000113453 1113 ntAPPRIS P1 TSL 1 (best) BASIC9.07□□□□□ -0.96
SgcaP82350 Gm5940-201ENSMUST00000117582 1068 ntBASIC9.07□□□□□ -0.96
SgcaP82350 Gm11663-201ENSMUST00000117888 290 ntBASIC9.07□□□□□ -0.96
SgcaP82350 Gm13562-201ENSMUST00000125198 797 ntTSL 2 BASIC9.07□□□□□ -0.96
SgcaP82350 Nudt17-202ENSMUST00000171249 1110 ntAPPRIS P1 TSL 1 (best) BASIC9.07□□□□□ -0.96
SgcaP82350 Gm10807-201ENSMUST00000177134 795 ntBASIC9.07□□□□□ -0.96
SgcaP82350 Rpl41-206ENSMUST00000177163 544 ntAPPRIS P2 TSL 1 (best) BASIC9.07□□□□□ -0.96
SgcaP82350 6530403H02Rik-204ENSMUST00000183276 659 ntTSL 3 BASIC9.07□□□□□ -0.96
SgcaP82350 Gm29187-201ENSMUST00000186681 689 ntTSL 3 BASIC9.07□□□□□ -0.96
SgcaP82350 Gm8885-201ENSMUST00000189382 598 ntBASIC9.07□□□□□ -0.96
SgcaP82350 8030442B05Rik-201ENSMUST00000192626 1035 ntTSL 1 (best) BASIC9.07□□□□□ -0.96
SgcaP82350 A630035G10Rik-202ENSMUST00000194468 1065 ntTSL 1 (best) BASIC9.07□□□□□ -0.96
SgcaP82350 Ccl1-201ENSMUST00000021043 611 ntTSL 1 (best) BASIC9.07□□□□□ -0.96
SgcaP82350 Acy1-208ENSMUST00000214275 1284 ntTSL 5 BASIC9.07□□□□□ -0.96
SgcaP82350 Gm29154-230ENSMUST00000215044 1165 ntTSL 5 BASIC9.07□□□□□ -0.96
SgcaP82350 Gm34868-201ENSMUST00000218341 530 ntTSL 3 BASIC9.07□□□□□ -0.96
SgcaP82350 Rps3a1-201ENSMUST00000029722 977 ntAPPRIS P1 TSL 1 (best) BASIC9.07□□□□□ -0.96
SgcaP82350 Gm7399-201ENSMUST00000032395 858 ntBASIC9.07□□□□□ -0.96
SgcaP82350 Crygs-201ENSMUST00000040592 708 ntAPPRIS P1 TSL 1 (best) BASIC9.07□□□□□ -0.96
SgcaP82350 Dysf-204ENSMUST00000113821 6803 ntAPPRIS ALT2 TSL 5 BASIC9.07□□□□□ -0.96
SgcaP82350 Anln-201ENSMUST00000040912 4605 ntAPPRIS P1 TSL 1 (best) BASIC9.07□□□□□ -0.96
SgcaP82350 Gadl1-202ENSMUST00000119291 1729 ntAPPRIS ALT2 TSL 1 (best) BASIC9.07□□□□□ -0.96
SgcaP82350 Trak1-211ENSMUST00000211187 4043 ntAPPRIS ALT2 TSL 5 BASIC9.07□□□□□ -0.96
SgcaP82350 Greb1-201ENSMUST00000048064 7940 ntAPPRIS P3 TSL 1 (best) BASIC9.07□□□□□ -0.96
SgcaP82350 Alms1-201ENSMUST00000072018 9986 ntAPPRIS P2 TSL 1 (best) BASIC9.07□□□□□ -0.96
SgcaP82350 Allc-202ENSMUST00000110917 1384 ntAPPRIS P1 TSL 1 (best) BASIC9.07□□□□□ -0.96
SgcaP82350 Zc3hav1-203ENSMUST00000114900 4944 ntAPPRIS P1 TSL 5 BASIC9.07□□□□□ -0.96
SgcaP82350 Gosr2-201ENSMUST00000021329 3266 ntAPPRIS P1 TSL 1 (best) BASIC9.07□□□□□ -0.96
SgcaP82350 Parp10-201ENSMUST00000075689 3284 ntAPPRIS P1 TSL 1 (best) BASIC9.07□□□□□ -0.96
SgcaP82350 Gm42608-201ENSMUST00000197563 2018 ntBASIC9.07□□□□□ -0.96
SgcaP82350 Bfar-201ENSMUST00000023365 3003 ntAPPRIS P1 TSL 1 (best) BASIC9.07□□□□□ -0.96
SgcaP82350 Klhl22-202ENSMUST00000120488 2596 ntAPPRIS P1 TSL 1 (best) BASIC9.07□□□□□ -0.96
SgcaP82350 Pdpr-201ENSMUST00000039333 4938 ntAPPRIS P1 TSL 1 (best) BASIC9.07□□□□□ -0.96
SgcaP82350 AC121574.1-201ENSMUST00000228770 3132 ntBASIC9.07□□□□□ -0.96
SgcaP82350 Adar-205ENSMUST00000121094 2321 ntTSL 1 (best) BASIC9.06□□□□□ -0.96
SgcaP82350 Tmed5-205ENSMUST00000119437 3436 ntTSL 1 (best) BASIC9.06□□□□□ -0.96
SgcaP82350 Lin37-202ENSMUST00000108164 1312 ntTSL 1 (best) BASIC9.06□□□□□ -0.96
SgcaP82350 E130018N17Rik-201ENSMUST00000129713 1309 ntTSL 1 (best) BASIC9.06□□□□□ -0.96
SgcaP82350 Acer2-202ENSMUST00000084433 4060 ntTSL 1 (best) BASIC9.06□□□□□ -0.96
SgcaP82350 Gm38169-201ENSMUST00000191822 2539 ntBASIC9.06□□□□□ -0.96
SgcaP82350 Tyw3-204ENSMUST00000170461 4270 ntTSL 5 BASIC9.06□□□□□ -0.96
SgcaP82350 Gm32511-202ENSMUST00000217021 2069 ntTSL 1 (best) BASIC9.06□□□□□ -0.96
SgcaP82350 Pip5k1a-201ENSMUST00000005768 3480 ntAPPRIS ALT2 TSL 5 BASIC9.06□□□□□ -0.96
SgcaP82350 Tanc1-208ENSMUST00000139863 7246 ntAPPRIS P3 TSL 1 (best) BASIC9.06□□□□□ -0.96
SgcaP82350 Ap1m2-201ENSMUST00000003397 1706 ntAPPRIS P3 TSL 1 (best) BASIC9.06□□□□□ -0.96
SgcaP82350 Gm44445-201ENSMUST00000204075 2683 ntBASIC9.06□□□□□ -0.96
SgcaP82350 Zbtb34-202ENSMUST00000113158 6602 ntAPPRIS P1 TSL 3 BASIC9.06□□□□□ -0.96
SgcaP82350 Nudt7-203ENSMUST00000109109 2795 ntAPPRIS ALT2 TSL 1 (best) BASIC9.06□□□□□ -0.96
SgcaP82350 Ighv5-9-201ENSMUST00000103448 418 ntAPPRIS P1 BASIC9.06□□□□□ -0.96
SgcaP82350 Rhox7-ps1-201ENSMUST00000117595 806 ntBASIC9.06□□□□□ -0.96
SgcaP82350 Gm16341-201ENSMUST00000126385 377 ntTSL 1 (best) BASIC9.06□□□□□ -0.96
SgcaP82350 Gm2991-201ENSMUST00000173338 480 ntBASIC9.06□□□□□ -0.96
SgcaP82350 Gm20470-201ENSMUST00000174654 331 ntTSL 1 (best) BASIC9.06□□□□□ -0.96
SgcaP82350 Gm28746-201ENSMUST00000187453 380 ntBASIC9.06□□□□□ -0.96
SgcaP82350 Gm6621-201ENSMUST00000193251 772 ntBASIC9.06□□□□□ -0.96
SgcaP82350 Gm19710-201ENSMUST00000200257 640 ntTSL 1 (best) BASIC9.06□□□□□ -0.96
SgcaP82350 Gm21221-201ENSMUST00000202876 1073 ntTSL 1 (best) BASIC9.06□□□□□ -0.96
SgcaP82350 Gm44066-201ENSMUST00000203263 519 ntTSL 3 BASIC9.06□□□□□ -0.96
SgcaP82350 Isg20-206ENSMUST00000205981 834 ntTSL 3 BASIC9.06□□□□□ -0.96
SgcaP82350 Cmtm2a-203ENSMUST00000212492 635 ntAPPRIS ALT2 TSL 3 BASIC9.06□□□□□ -0.96
SgcaP82350 AC137950.2-201ENSMUST00000227127 1089 ntBASIC9.06□□□□□ -0.96
SgcaP82350 Ctrb1-201ENSMUST00000034435 878 ntAPPRIS P1 TSL 1 (best) BASIC9.06□□□□□ -0.96
SgcaP82350 Mirlet7c-2-201ENSMUST00000083674 95 ntBASIC9.06□□□□□ -0.96
SgcaP82350 Sdf4-202ENSMUST00000097734 973 ntTSL 1 (best) BASIC9.06□□□□□ -0.96
SgcaP82350 Nanog-201ENSMUST00000012540 2211 ntAPPRIS P3 TSL 1 (best) BASIC9.06□□□□□ -0.96
SgcaP82350 9230112E08Rik-202ENSMUST00000189441 3352 ntBASIC9.06□□□□□ -0.96
SgcaP82350 Satb1-204ENSMUST00000133574 3461 ntAPPRIS P2 TSL 1 (best) BASIC9.06□□□□□ -0.96
SgcaP82350 Gm15482-201ENSMUST00000152691 4529 ntTSL 1 (best) BASIC9.06□□□□□ -0.96
SgcaP82350 Pax6-206ENSMUST00000111086 2601 ntAPPRIS P3 TSL 1 (best) BASIC9.06□□□□□ -0.96
SgcaP82350 Slc25a17-201ENSMUST00000023040 1667 ntAPPRIS P1 TSL 1 (best) BASIC9.06□□□□□ -0.96
SgcaP82350 Lpxn-201ENSMUST00000025601 1675 ntAPPRIS P1 TSL 1 (best) BASIC9.06□□□□□ -0.96
SgcaP82350 Hmgb1-201ENSMUST00000085546 2838 ntAPPRIS P1 TSL 1 (best) BASIC9.06□□□□□ -0.96
SgcaP82350 Pdlim5-204ENSMUST00000168967 1755 ntTSL 1 (best) BASIC9.06□□□□□ -0.96
SgcaP82350 Prc1-202ENSMUST00000163812 3026 ntAPPRIS P3 TSL 1 (best) BASIC9.06□□□□□ -0.96
SgcaP82350 N4bp2l1-205ENSMUST00000202031 1864 ntTSL 1 (best) BASIC9.06□□□□□ -0.96
SgcaP82350 Unc13d-209ENSMUST00000174822 3337 ntAPPRIS P2 TSL 1 (best) BASIC9.06□□□□□ -0.96
SgcaP82350 Zzef1-208ENSMUST00000207107 11306 ntAPPRIS ALT2 TSL 5 BASIC9.06□□□□□ -0.96
SgcaP82350 Slc39a14-210ENSMUST00000152067 2075 ntAPPRIS ALT2 TSL 1 (best) BASIC9.06□□□□□ -0.96
SgcaP82350 Sun1-205ENSMUST00000110883 3714 ntAPPRIS ALT2 TSL 1 (best) BASIC9.06□□□□□ -0.96
SgcaP82350 Gm26614-201ENSMUST00000180386 3909 ntTSL 1 (best) BASIC9.06□□□□□ -0.96
SgcaP82350 Pfkm-201ENSMUST00000051226 2880 ntAPPRIS P1 TSL 1 (best) BASIC9.06□□□□□ -0.96
SgcaP82350 Eef2-201ENSMUST00000047864 3089 ntAPPRIS P1 TSL 1 (best) BASIC9.06□□□□□ -0.96
SgcaP82350 Rasal1-205ENSMUST00000156722 3251 ntAPPRIS P1 TSL 1 (best) BASIC9.06□□□□□ -0.96
SgcaP82350 Pde11a-201ENSMUST00000099992 4189 ntAPPRIS P1 TSL 1 (best) BASIC9.05□□□□□ -0.96
SgcaP82350 Frmd6-201ENSMUST00000057859 4662 ntAPPRIS P1 TSL 1 (best) BASIC9.05□□□□□ -0.96
SgcaP82350 Gm32219-201ENSMUST00000221234 1819 ntTSL 5 BASIC9.05□□□□□ -0.96
SgcaP82350 Msln-201ENSMUST00000075884 2114 ntAPPRIS P1 TSL 1 (best) BASIC9.05□□□□□ -0.96
SgcaP82350 Rgs12-204ENSMUST00000114281 3439 ntAPPRIS ALT2 TSL 1 (best) BASIC9.05□□□□□ -0.96
SgcaP82350 Gtf2i-223ENSMUST00000174513 4021 ntAPPRIS ALT2 TSL 2 BASIC9.05□□□□□ -0.96
SgcaP82350 R3hdm2-201ENSMUST00000064793 4175 ntTSL 1 (best) BASIC9.05□□□□□ -0.96
SgcaP82350 Uroc1-201ENSMUST00000046128 3370 ntAPPRIS P1 TSL 1 (best) BASIC9.05□□□□□ -0.96
SgcaP82350 Aoc1-201ENSMUST00000031835 2675 ntAPPRIS P1 TSL 1 (best) BASIC9.05□□□□□ -0.96
SgcaP82350 Gm42741-201ENSMUST00000201340 2278 ntBASIC9.05□□□□□ -0.96
SgcaP82350 Gm2974-201ENSMUST00000164512 1990 ntAPPRIS P5 TSL 5 BASIC9.05□□□□□ -0.96
SgcaP82350 4930588G17Rik-201ENSMUST00000208075 1474 ntTSL 1 (best) BASIC9.05□□□□□ -0.96
SgcaP82350 Lrrc8a-201ENSMUST00000095078 4301 ntAPPRIS P1 TSL 5 BASIC9.05□□□□□ -0.96
Retrieved 100 of 76,532 protein–RNA pairs in 40.8 ms