Protein–RNA interactions for Protein: P34928

Apoc1, Apolipoprotein C-I, mousemouse

Predictions only

Length 88 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Apoc1P34928 Txndc16-203ENSMUST00000123879 4069 ntAPPRIS ALT2 TSL 1 (best) BASIC9.47□□□□□ -0.89
Apoc1P34928 Orc4-201ENSMUST00000028098 4066 ntAPPRIS P1 TSL 1 (best) BASIC9.47□□□□□ -0.89
Apoc1P34928 Gm5822-201ENSMUST00000161562 1378 ntBASIC9.47□□□□□ -0.89
Apoc1P34928 4833422M21Rik-203ENSMUST00000181747 1365 ntTSL 1 (best) BASIC9.47□□□□□ -0.89
Apoc1P34928 Lsamp-201ENSMUST00000078873 2951 ntTSL 1 (best) BASIC9.47□□□□□ -0.89
Apoc1P34928 Zmynd11-206ENSMUST00000110637 3770 ntTSL 5 BASIC9.47□□□□□ -0.89
Apoc1P34928 Ldb3-205ENSMUST00000090040 4981 ntAPPRIS ALT2 TSL 1 (best) BASIC9.47□□□□□ -0.89
Apoc1P34928 Gm5420-201ENSMUST00000071008 2206 ntTSL 2 BASIC9.47□□□□□ -0.89
Apoc1P34928 Nrxn1-215ENSMUST00000173917 1439 ntTSL 2 BASIC9.47□□□□□ -0.89
Apoc1P34928 Rbpsuh-rs3-201ENSMUST00000182751 1441 ntBASIC9.47□□□□□ -0.89
Apoc1P34928 Gm26686-201ENSMUST00000181951 3467 ntTSL 1 (best) BASIC9.47□□□□□ -0.89
Apoc1P34928 Ano2-204ENSMUST00000160496 3925 ntAPPRIS P1 TSL 1 (best) BASIC9.47□□□□□ -0.89
Apoc1P34928 Ankub1-202ENSMUST00000197088 1854 ntAPPRIS P1 TSL 5 BASIC9.47□□□□□ -0.89
Apoc1P34928 Sh3d21-201ENSMUST00000094760 1859 ntTSL 1 (best) BASIC9.47□□□□□ -0.89
Apoc1P34928 Il10ra-202ENSMUST00000176222 2799 ntAPPRIS ALT2 TSL 1 (best) BASIC9.46□□□□□ -0.89
Apoc1P34928 Pdcd10-205ENSMUST00000161137 1927 ntAPPRIS P1 TSL 1 (best) BASIC9.46□□□□□ -0.89
Apoc1P34928 Il1r1-201ENSMUST00000027241 5819 ntAPPRIS P3 TSL 1 (best) BASIC9.46□□□□□ -0.89
Apoc1P34928 Dio2-201ENSMUST00000082432 5815 ntAPPRIS P1 TSL 1 (best) BASIC9.46□□□□□ -0.89
Apoc1P34928 AC154352.1-201ENSMUST00000221477 2365 ntBASIC9.46□□□□□ -0.89
Apoc1P34928 Xlr4c-201ENSMUST00000068551 1500 ntAPPRIS P1 TSL 5 BASIC9.46□□□□□ -0.89
Apoc1P34928 Dmtn-203ENSMUST00000110984 4176 ntAPPRIS P2 TSL 5 BASIC9.46□□□□□ -0.89
Apoc1P34928 Anln-201ENSMUST00000040912 4605 ntAPPRIS P1 TSL 1 (best) BASIC9.46□□□□□ -0.89
Apoc1P34928 Lmo3-207ENSMUST00000163065 2425 ntTSL 3 BASIC9.46□□□□□ -0.89
Apoc1P34928 Zfp280b-201ENSMUST00000061617 5097 ntAPPRIS P1 TSL 1 (best) BASIC9.46□□□□□ -0.89
Apoc1P34928 Nfyc-204ENSMUST00000120779 2006 ntAPPRIS P1 TSL 5 BASIC9.46□□□□□ -0.89
Apoc1P34928 Impa1-202ENSMUST00000118410 2988 ntTSL 1 (best) BASIC9.46□□□□□ -0.89
Apoc1P34928 Gm45501-201ENSMUST00000211468 2526 ntBASIC9.46□□□□□ -0.89
Apoc1P34928 Ank3-220ENSMUST00000182439 2586 ntTSL 1 (best) BASIC9.46□□□□□ -0.89
Apoc1P34928 Pdgfra-202ENSMUST00000168162 6834 ntAPPRIS P1 TSL 1 (best) BASIC9.46□□□□□ -0.89
Apoc1P34928 Apobec1-201ENSMUST00000112585 2127 ntAPPRIS P1 TSL 1 (best) BASIC9.46□□□□□ -0.89
Apoc1P34928 Ctnnd1-202ENSMUST00000066177 5044 ntTSL 1 (best) BASIC9.46□□□□□ -0.89
Apoc1P34928 Bdh1-203ENSMUST00000115227 3122 ntAPPRIS P1 TSL 1 (best) BASIC9.46□□□□□ -0.89
Apoc1P34928 Abcf1-201ENSMUST00000043757 3161 ntAPPRIS P1 TSL 1 (best) BASIC9.46□□□□□ -0.89
Apoc1P34928 Serpinb6b-203ENSMUST00000164541 1719 ntTSL 1 (best) BASIC9.46□□□□□ -0.89
Apoc1P34928 Hsdl1-204ENSMUST00000212517 2215 ntTSL 1 (best) BASIC9.46□□□□□ -0.89
Apoc1P34928 Olfr464-205ENSMUST00000217112 2232 ntAPPRIS P1 TSL 5 BASIC9.46□□□□□ -0.89
Apoc1P34928 Dctn1-202ENSMUST00000113907 4205 ntTSL 5 BASIC9.46□□□□□ -0.89
Apoc1P34928 Tmem126b-201ENSMUST00000032843 2259 ntAPPRIS P1 TSL 1 (best) BASIC9.46□□□□□ -0.9
Apoc1P34928 Prr15l-203ENSMUST00000107633 930 ntAPPRIS P1 TSL 2 BASIC9.46□□□□□ -0.9
Apoc1P34928 Gm14592-201ENSMUST00000117201 560 ntBASIC9.46□□□□□ -0.9
Apoc1P34928 Gm15528-201ENSMUST00000117821 864 ntBASIC9.46□□□□□ -0.9
Apoc1P34928 Gm11836-201ENSMUST00000121022 441 ntBASIC9.46□□□□□ -0.9
Apoc1P34928 Tctex1d1-205ENSMUST00000140654 891 ntAPPRIS ALT2 TSL 2 BASIC9.46□□□□□ -0.9
Apoc1P34928 Nudt6-207ENSMUST00000141438 899 ntTSL 2 BASIC9.46□□□□□ -0.9
Apoc1P34928 Tmem204-202ENSMUST00000153745 902 ntTSL 2 BASIC9.46□□□□□ -0.9
Apoc1P34928 Itgad-204ENSMUST00000177111 3845 ntAPPRIS ALT2 TSL 5 BASIC9.46□□□□□ -0.9
Apoc1P34928 Gm4654-201ENSMUST00000183305 982 ntBASIC9.46□□□□□ -0.9
Apoc1P34928 1600010M07Rik-202ENSMUST00000188662 654 ntTSL 2 BASIC9.46□□□□□ -0.9
Apoc1P34928 5730585A16Rik-201ENSMUST00000193457 1027 ntBASIC9.46□□□□□ -0.9
Apoc1P34928 Gm32939-201ENSMUST00000222336 843 ntTSL 3 BASIC9.46□□□□□ -0.9
Apoc1P34928 AC154461.3-201ENSMUST00000224831 573 ntBASIC9.46□□□□□ -0.9
Apoc1P34928 1600002K03Rik-201ENSMUST00000041882 678 ntAPPRIS P1 TSL 1 (best) BASIC9.46□□□□□ -0.9
Apoc1P34928 Phxr2-201ENSMUST00000060761 1159 ntAPPRIS P1 BASIC9.46□□□□□ -0.9
Apoc1P34928 Rpl17-201ENSMUST00000079716 775 ntAPPRIS P1 TSL 1 (best) BASIC9.46□□□□□ -0.9
Apoc1P34928 Fermt1-201ENSMUST00000038280 4915 ntAPPRIS P1 TSL 5 BASIC9.46□□□□□ -0.9
Apoc1P34928 Lox-202ENSMUST00000171470 4468 ntAPPRIS P1 TSL 1 (best) BASIC9.46□□□□□ -0.9
Apoc1P34928 AU022252-203ENSMUST00000141112 7151 ntAPPRIS P1 TSL 1 (best) BASIC9.46□□□□□ -0.9
Apoc1P34928 Lpo-201ENSMUST00000103177 2926 ntAPPRIS P1 TSL 1 (best) BASIC9.46□□□□□ -0.9
Apoc1P34928 Vmn1r16-203ENSMUST00000228356 3492 ntAPPRIS ALT2 BASIC9.46□□□□□ -0.9
Apoc1P34928 Bicd1-203ENSMUST00000111513 4049 ntTSL 1 (best) BASIC9.46□□□□□ -0.9
Apoc1P34928 Patz1-207ENSMUST00000134089 1904 ntTSL 1 (best) BASIC9.46□□□□□ -0.9
Apoc1P34928 Rbms3-201ENSMUST00000044901 1983 ntAPPRIS ALT2 TSL 1 (best) BASIC9.46□□□□□ -0.9
Apoc1P34928 Cycs-202ENSMUST00000161401 3123 ntAPPRIS P1 TSL 1 (best) BASIC9.46□□□□□ -0.9
Apoc1P34928 Loxl4-201ENSMUST00000026190 3738 ntAPPRIS P3 TSL 1 (best) BASIC9.46□□□□□ -0.9
Apoc1P34928 Prss57-201ENSMUST00000020573 2693 ntAPPRIS P1 TSL 1 (best) BASIC9.46□□□□□ -0.9
Apoc1P34928 Sptbn1-202ENSMUST00000011877 8238 ntAPPRIS P1 TSL 1 (best) BASIC9.46□□□□□ -0.9
Apoc1P34928 Clec12b-201ENSMUST00000032261 1521 ntAPPRIS P1 TSL 1 (best) BASIC9.46□□□□□ -0.9
Apoc1P34928 C330027C09Rik-201ENSMUST00000048374 3974 ntAPPRIS P1 TSL 1 (best) BASIC9.46□□□□□ -0.9
Apoc1P34928 Kalrn-203ENSMUST00000114947 2922 ntTSL 5 BASIC9.45□□□□□ -0.9
Apoc1P34928 Sfxn5-201ENSMUST00000045846 3656 ntAPPRIS P2 TSL 1 (best) BASIC9.45□□□□□ -0.9
Apoc1P34928 Gm21358-201ENSMUST00000191645 1659 ntBASIC9.45□□□□□ -0.9
Apoc1P34928 Kcne2-201ENSMUST00000047383 1690 ntAPPRIS P1 TSL 1 (best) BASIC9.45□□□□□ -0.9
Apoc1P34928 Gpr37-202ENSMUST00000200812 3035 ntTSL 1 (best) BASIC9.45□□□□□ -0.9
Apoc1P34928 Svil-203ENSMUST00000126977 7907 ntAPPRIS P3 TSL 5 BASIC9.45□□□□□ -0.9
Apoc1P34928 AC113282.1-201ENSMUST00000225278 1707 ntAPPRIS P1 BASIC9.45□□□□□ -0.9
Apoc1P34928 Tcaf1-201ENSMUST00000045054 5257 ntAPPRIS P1 TSL 1 (best) BASIC9.45□□□□□ -0.9
Apoc1P34928 St5-203ENSMUST00000084738 3161 ntAPPRIS ALT2 TSL 5 BASIC9.45□□□□□ -0.9
Apoc1P34928 Nrg1-212ENSMUST00000208598 1778 ntTSL 5 BASIC9.45□□□□□ -0.9
Apoc1P34928 Gm28268-201ENSMUST00000188966 2528 ntTSL 5 BASIC9.45□□□□□ -0.9
Apoc1P34928 Cxcl12-201ENSMUST00000073043 5627 ntTSL 1 (best) BASIC9.45□□□□□ -0.9
Apoc1P34928 Tmem88b-201ENSMUST00000097742 3471 ntAPPRIS P1 TSL 1 (best) BASIC9.45□□□□□ -0.9
Apoc1P34928 Ptp4a3-203ENSMUST00000165541 3539 ntAPPRIS P1 TSL 5 BASIC9.45□□□□□ -0.9
Apoc1P34928 Cfi-201ENSMUST00000077918 2079 ntAPPRIS P1 TSL 1 (best) BASIC9.45□□□□□ -0.9
Apoc1P34928 Igkv3-10-201ENSMUST00000103397 356 ntAPPRIS ALT2 BASIC9.45□□□□□ -0.9
Apoc1P34928 Inca1-202ENSMUST00000108541 1150 ntAPPRIS P3 TSL 1 (best) BASIC9.45□□□□□ -0.9
Apoc1P34928 Inca1-203ENSMUST00000108542 1080 ntAPPRIS P3 TSL 1 (best) BASIC9.45□□□□□ -0.9
Apoc1P34928 Slc45a1-202ENSMUST00000117997 2955 ntAPPRIS ALT2 TSL 1 (best) BASIC9.45□□□□□ -0.9
Apoc1P34928 Gm13166-201ENSMUST00000123828 940 ntTSL 5 BASIC9.45□□□□□ -0.9
Apoc1P34928 Inca1-205ENSMUST00000126114 1189 ntAPPRIS P3 TSL 1 (best) BASIC9.45□□□□□ -0.9
Apoc1P34928 Gm14275-201ENSMUST00000152112 430 ntTSL 1 (best) BASIC9.45□□□□□ -0.9
Apoc1P34928 Gm13236-201ENSMUST00000153010 940 ntTSL 5 BASIC9.45□□□□□ -0.9
Apoc1P34928 Gm18367-201ENSMUST00000176139 600 ntBASIC9.45□□□□□ -0.9
Apoc1P34928 Gm4753-201ENSMUST00000188327 1255 ntBASIC9.45□□□□□ -0.9
Apoc1P34928 Atraid-205ENSMUST00000201136 894 ntAPPRIS ALT2 TSL 3 BASIC9.45□□□□□ -0.9
Apoc1P34928 Gm44136-201ENSMUST00000203819 1106 ntBASIC9.45□□□□□ -0.9
Apoc1P34928 Gm34868-201ENSMUST00000218341 530 ntTSL 3 BASIC9.45□□□□□ -0.9
Apoc1P34928 Ly6g5c-201ENSMUST00000037849 509 ntAPPRIS P1 TSL 1 (best) BASIC9.45□□□□□ -0.9
Apoc1P34928 Nudt7-201ENSMUST00000066514 935 ntAPPRIS ALT2 TSL 1 (best) BASIC9.45□□□□□ -0.9
Apoc1P34928 Inca1-201ENSMUST00000073625 1218 ntAPPRIS P3 TSL 1 (best) BASIC9.45□□□□□ -0.9
Apoc1P34928 Gm23105-201ENSMUST00000083719 134 ntBASIC9.45□□□□□ -0.9
Retrieved 100 of 76,532 protein–RNA pairs in 47.6 ms