Protein–RNA interactions for Protein: O89079

Cope, Coatomer subunit epsilon, mousemouse

Predictions only

Length 308 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CopeO89079 Atad5-201ENSMUST00000017694 7272 ntAPPRIS P2 TSL 1 (best) BASIC11.12□□□□□ -0.63
CopeO89079 Hjurp-201ENSMUST00000054674 4878 ntAPPRIS P2 TSL 1 (best) BASIC11.12□□□□□ -0.63
CopeO89079 Rbm8a-202ENSMUST00000196456 2604 ntAPPRIS P1 TSL 1 (best) BASIC11.12□□□□□ -0.63
CopeO89079 Rbm8a-206ENSMUST00000200647 2620 ntTSL 2 BASIC11.12□□□□□ -0.63
CopeO89079 Tardbp-206ENSMUST00000105702 6425 ntTSL 5 BASIC11.12□□□□□ -0.63
CopeO89079 Ptk2b-203ENSMUST00000111121 3365 ntTSL 1 (best) BASIC11.12□□□□□ -0.63
CopeO89079 Gm37242-201ENSMUST00000191873 2085 ntBASIC11.12□□□□□ -0.63
CopeO89079 Gm44115-201ENSMUST00000203917 2069 ntTSL 1 (best) BASIC11.12□□□□□ -0.63
CopeO89079 Top1-201ENSMUST00000109468 3856 ntAPPRIS P1 TSL 1 (best) BASIC11.12□□□□□ -0.63
CopeO89079 Echdc1-201ENSMUST00000020034 3856 ntTSL 1 (best) BASIC11.12□□□□□ -0.63
CopeO89079 Qrfpr-203ENSMUST00000197447 1690 ntTSL 5 BASIC11.12□□□□□ -0.63
CopeO89079 Gm21817-201ENSMUST00000178584 2583 ntBASIC11.12□□□□□ -0.63
CopeO89079 Polh-201ENSMUST00000024749 2569 ntAPPRIS P1 TSL 1 (best) BASIC11.12□□□□□ -0.63
CopeO89079 Ndufab1-201ENSMUST00000033157 3479 ntAPPRIS P1 TSL 1 (best) BASIC11.12□□□□□ -0.63
CopeO89079 Gm26527-201ENSMUST00000180416 1948 ntTSL 5 BASIC11.12□□□□□ -0.63
CopeO89079 Fam161a-201ENSMUST00000058269 1927 ntAPPRIS P1 TSL 1 (best) BASIC11.12□□□□□ -0.63
CopeO89079 Flna-202ENSMUST00000101454 8345 ntAPPRIS P2 TSL 1 (best) BASIC11.12□□□□□ -0.63
CopeO89079 Gm364-201ENSMUST00000114725 2156 ntAPPRIS P1 TSL 2 BASIC11.12□□□□□ -0.63
CopeO89079 Cd19-201ENSMUST00000032968 2432 ntAPPRIS ALT2 TSL 1 (best) BASIC11.12□□□□□ -0.63
CopeO89079 Gm23272-201ENSMUST00000104053 129 ntBASIC11.12□□□□□ -0.63
CopeO89079 Ostm1-202ENSMUST00000105497 770 ntTSL 2 BASIC11.12□□□□□ -0.63
CopeO89079 Gm13422-201ENSMUST00000118834 504 ntBASIC11.12□□□□□ -0.63
CopeO89079 Gm13091-201ENSMUST00000128800 469 ntTSL 5 BASIC11.12□□□□□ -0.63
CopeO89079 Vmn2r-ps54-203ENSMUST00000150856 1142 ntTSL 1 (best) BASIC11.12□□□□□ -0.63
CopeO89079 1700001G11Rik-203ENSMUST00000153646 764 ntTSL 1 (best) BASIC11.12□□□□□ -0.63
CopeO89079 Hcfc1r1-203ENSMUST00000180140 693 ntAPPRIS P2 TSL 2 BASIC11.12□□□□□ -0.63
CopeO89079 Gm5732-201ENSMUST00000182596 1007 ntBASIC11.12□□□□□ -0.63
CopeO89079 Ighv5-11-201ENSMUST00000193354 371 ntBASIC11.12□□□□□ -0.63
CopeO89079 Gm35549-201ENSMUST00000203176 735 ntAPPRIS P1 TSL 5 BASIC11.12□□□□□ -0.63
CopeO89079 2010001M07Rik-201ENSMUST00000214235 364 ntTSL 1 (best) BASIC11.12□□□□□ -0.63
CopeO89079 AC154589.2-201ENSMUST00000228847 251 ntBASIC11.12□□□□□ -0.63
CopeO89079 Pvalb-201ENSMUST00000005860 977 ntAPPRIS P1 TSL 1 (best) BASIC11.12□□□□□ -0.63
CopeO89079 Phxr2-201ENSMUST00000060761 1159 ntAPPRIS P1 BASIC11.12□□□□□ -0.63
CopeO89079 Tmem220-202ENSMUST00000079077 1147 ntAPPRIS P3 TSL 1 (best) BASIC11.12□□□□□ -0.63
CopeO89079 Olfr1209-201ENSMUST00000099809 933 ntAPPRIS P1 BASIC11.12□□□□□ -0.63
CopeO89079 Stau2-202ENSMUST00000054668 2907 ntAPPRIS P1 TSL 5 BASIC11.12□□□□□ -0.63
CopeO89079 Gm10750-201ENSMUST00000099266 1506 ntAPPRIS P1 BASIC11.12□□□□□ -0.63
CopeO89079 Prc1-202ENSMUST00000163812 3026 ntAPPRIS P3 TSL 1 (best) BASIC11.12□□□□□ -0.63
CopeO89079 Cfap43-202ENSMUST00000095998 3764 ntAPPRIS P1 TSL 1 (best) BASIC11.12□□□□□ -0.63
CopeO89079 Git2-203ENSMUST00000112183 4886 ntTSL 5 BASIC11.12□□□□□ -0.63
CopeO89079 Cfap53-201ENSMUST00000114895 1888 ntAPPRIS P1 TSL 1 (best) BASIC11.12□□□□□ -0.63
CopeO89079 Cbfa2t3-203ENSMUST00000127984 7645 ntAPPRIS P3 TSL 1 (best) BASIC11.12□□□□□ -0.63
CopeO89079 Pcdha4-201ENSMUST00000192295 4129 ntTSL 1 (best) BASIC11.12□□□□□ -0.63
CopeO89079 Gm43307-201ENSMUST00000199465 2371 ntBASIC11.12□□□□□ -0.63
CopeO89079 Nudcd1-201ENSMUST00000038719 2600 ntAPPRIS ALT2 TSL 1 (best) BASIC11.12□□□□□ -0.63
CopeO89079 Pofut1-207ENSMUST00000152390 4833 ntTSL 2 BASIC11.12□□□□□ -0.63
CopeO89079 D030055H07Rik-202ENSMUST00000150953 4325 ntTSL 1 (best) BASIC11.12□□□□□ -0.63
CopeO89079 Ankrd53-201ENSMUST00000014891 1739 ntAPPRIS P1 TSL 1 (best) BASIC11.12□□□□□ -0.63
CopeO89079 Mllt10-201ENSMUST00000028076 4917 ntAPPRIS P1 TSL 1 (best) BASIC11.12□□□□□ -0.63
CopeO89079 Cacna2d1-204ENSMUST00000115281 3412 ntTSL 1 (best) BASIC11.12□□□□□ -0.63
CopeO89079 C1rb-201ENSMUST00000184647 2429 ntAPPRIS P1 TSL 1 (best) BASIC11.11□□□□□ -0.63
CopeO89079 F730016J06Rik-201ENSMUST00000126140 1344 ntTSL 1 (best) BASIC11.11□□□□□ -0.63
CopeO89079 Olfr272-202ENSMUST00000107667 1936 ntAPPRIS P1 TSL 3 BASIC11.11□□□□□ -0.63
CopeO89079 5430419D17Rik-203ENSMUST00000208921 7948 ntAPPRIS P1 TSL 5 BASIC11.11□□□□□ -0.63
CopeO89079 Traf3-201ENSMUST00000021706 7060 ntAPPRIS P1 TSL 1 (best) BASIC11.11□□□□□ -0.63
CopeO89079 Ctnnd1-223ENSMUST00000111697 5294 ntTSL 5 BASIC11.11□□□□□ -0.63
CopeO89079 Kcng4-201ENSMUST00000061828 3806 ntAPPRIS P1 TSL 1 (best) BASIC11.11□□□□□ -0.63
CopeO89079 Gm42450-201ENSMUST00000199286 2644 ntTSL 5 BASIC11.11□□□□□ -0.63
CopeO89079 Rnf43-202ENSMUST00000092800 4037 ntAPPRIS P1 TSL 5 BASIC11.11□□□□□ -0.63
CopeO89079 Hspa14-201ENSMUST00000027961 1795 ntAPPRIS P1 TSL 1 (best) BASIC11.11□□□□□ -0.63
CopeO89079 Trmt44-201ENSMUST00000030980 3790 ntAPPRIS P1 TSL 1 (best) BASIC11.11□□□□□ -0.63
CopeO89079 Gosr2-201ENSMUST00000021329 3266 ntAPPRIS P1 TSL 1 (best) BASIC11.11□□□□□ -0.63
CopeO89079 Gm44445-201ENSMUST00000204075 2683 ntBASIC11.11□□□□□ -0.63
CopeO89079 Vwf-203ENSMUST00000112254 8834 ntAPPRIS P1 TSL 1 (best) BASIC11.11□□□□□ -0.63
CopeO89079 Ncmap-203ENSMUST00000105858 1616 ntAPPRIS P1 TSL 1 (best) BASIC11.11□□□□□ -0.63
CopeO89079 3000002C10Rik-201ENSMUST00000125451 1614 ntTSL 2 BASIC11.11□□□□□ -0.63
CopeO89079 Mir877-201ENSMUST00000104738 85 ntBASIC11.11□□□□□ -0.63
CopeO89079 Gm11568-201ENSMUST00000107434 1145 ntAPPRIS P1 BASIC11.11□□□□□ -0.63
CopeO89079 Krtap4-8-201ENSMUST00000107439 983 ntAPPRIS P1 BASIC11.11□□□□□ -0.63
CopeO89079 Hint1-202ENSMUST00000117710 580 ntTSL 2 BASIC11.11□□□□□ -0.63
CopeO89079 Gm6506-201ENSMUST00000119775 1136 ntBASIC11.11□□□□□ -0.63
CopeO89079 Ndufb5-204ENSMUST00000127477 1079 ntAPPRIS P1 TSL 1 (best) BASIC11.11□□□□□ -0.63
CopeO89079 Bcas3os2-201ENSMUST00000134305 661 ntTSL 5 BASIC11.11□□□□□ -0.63
CopeO89079 Gm15486-201ENSMUST00000135147 604 ntTSL 3 BASIC11.11□□□□□ -0.63
CopeO89079 2610005L07Rik-201ENSMUST00000139264 948 ntBASIC11.11□□□□□ -0.63
CopeO89079 Platr20-202ENSMUST00000143209 937 ntTSL 1 (best) BASIC11.11□□□□□ -0.63
CopeO89079 6820431F20Rik-201ENSMUST00000150051 936 ntBASIC11.11□□□□□ -0.63
CopeO89079 Gm3625-201ENSMUST00000170816 102 ntAPPRIS P1 BASIC11.11□□□□□ -0.63
CopeO89079 Gm4654-201ENSMUST00000183305 982 ntBASIC11.11□□□□□ -0.63
CopeO89079 Gm28516-201ENSMUST00000190257 663 ntTSL 1 (best) BASIC11.11□□□□□ -0.63
CopeO89079 Gm17590-202ENSMUST00000197881 1232 ntTSL 2 BASIC11.11□□□□□ -0.63
CopeO89079 Mt1-202ENSMUST00000211807 1085 ntBASIC11.11□□□□□ -0.63
CopeO89079 AC124171.1-201ENSMUST00000221151 567 ntTSL 5 BASIC11.11□□□□□ -0.63
CopeO89079 Ccdc28b-201ENSMUST00000030586 879 ntAPPRIS P1 TSL 1 (best) BASIC11.11□□□□□ -0.63
CopeO89079 Ginm1-202ENSMUST00000065124 300 ntBASIC11.11□□□□□ -0.63
CopeO89079 Arhgap45-202ENSMUST00000099501 3948 ntAPPRIS ALT2 TSL 1 (best) BASIC11.11□□□□□ -0.63
CopeO89079 Eif2ak4-203ENSMUST00000110869 1715 ntTSL 1 (best) BASIC11.11□□□□□ -0.63
CopeO89079 Dgcr2-201ENSMUST00000012152 4045 ntAPPRIS P3 TSL 1 (best) BASIC11.11□□□□□ -0.63
CopeO89079 Sh3bgrl2-203ENSMUST00000188030 2549 ntTSL 1 (best) BASIC11.11□□□□□ -0.63
CopeO89079 Gm7993-201ENSMUST00000200970 1384 ntBASIC11.11□□□□□ -0.63
CopeO89079 Gm12198-201ENSMUST00000154068 1809 ntTSL 1 (best) BASIC11.11□□□□□ -0.63
CopeO89079 4933424N20Rik-201ENSMUST00000200749 1463 ntBASIC11.11□□□□□ -0.63
CopeO89079 Tardbp-209ENSMUST00000165113 6495 ntTSL 5 BASIC11.11□□□□□ -0.63
CopeO89079 Pde6b-201ENSMUST00000031456 2799 ntAPPRIS P1 TSL 1 (best) BASIC11.11□□□□□ -0.63
CopeO89079 Upk1b-201ENSMUST00000057767 1769 ntAPPRIS P1 TSL 1 (best) BASIC11.11□□□□□ -0.63
CopeO89079 Gm6714-201ENSMUST00000218677 2330 ntBASIC11.1□□□□□ -0.63
CopeO89079 Tbc1d22bos-202ENSMUST00000163069 1349 ntTSL 1 (best) BASIC11.1□□□□□ -0.63
CopeO89079 Lct-201ENSMUST00000073490 6174 ntAPPRIS P1 TSL 2 BASIC11.1□□□□□ -0.63
CopeO89079 Gm7168-201ENSMUST00000088809 1603 ntAPPRIS P1 TSL 1 (best) BASIC11.1□□□□□ -0.63
CopeO89079 Npl-201ENSMUST00000041874 1735 ntAPPRIS P1 TSL 1 (best) BASIC11.1□□□□□ -0.63
Retrieved 100 of 76,532 protein–RNA pairs in 38.1 ms