Protein–RNA interactions for Protein: Q2MKA5

Chrna5, Neuronal acetylcholine receptor subunit alpha-5, mousemouse

Predictions only

Length 467 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Chrna5Q2MKA5 Ebf2-202ENSMUST00000176029 2784 ntAPPRIS P1 TSL 1 (best) BASIC12.88□□□□□ -0.35
Chrna5Q2MKA5 Mak16-201ENSMUST00000033983 1902 ntAPPRIS P1 TSL 1 (best) BASIC12.88□□□□□ -0.35
Chrna5Q2MKA5 Gm16907-201ENSMUST00000180734 2317 ntTSL 1 (best) BASIC12.88□□□□□ -0.35
Chrna5Q2MKA5 Kctd10-202ENSMUST00000102581 3103 ntAPPRIS P3 TSL 1 (best) BASIC12.88□□□□□ -0.35
Chrna5Q2MKA5 A930003A15Rik-201ENSMUST00000100083 746 ntAPPRIS P1 TSL 1 (best) BASIC12.88□□□□□ -0.35
Chrna5Q2MKA5 Gm24066-201ENSMUST00000104515 131 ntBASIC12.88□□□□□ -0.35
Chrna5Q2MKA5 Eif5a-212ENSMUST00000153652 840 ntTSL 1 (best) BASIC12.88□□□□□ -0.35
Chrna5Q2MKA5 Gm22662-201ENSMUST00000175290 256 ntBASIC12.88□□□□□ -0.35
Chrna5Q2MKA5 4930505M18Rik-201ENSMUST00000175854 1288 ntTSL 1 (best) BASIC12.88□□□□□ -0.35
Chrna5Q2MKA5 Gm26750-201ENSMUST00000181718 711 ntTSL 5 BASIC12.88□□□□□ -0.35
Chrna5Q2MKA5 Gm29200-201ENSMUST00000188118 1085 ntTSL 1 (best) BASIC12.88□□□□□ -0.35
Chrna5Q2MKA5 Rhoc-205ENSMUST00000196817 877 ntAPPRIS P1 TSL 3 BASIC12.88□□□□□ -0.35
Chrna5Q2MKA5 Gm18122-201ENSMUST00000211390 904 ntBASIC12.88□□□□□ -0.35
Chrna5Q2MKA5 AC124503.1-201ENSMUST00000218524 526 ntTSL 3 BASIC12.88□□□□□ -0.35
Chrna5Q2MKA5 Nqo2-203ENSMUST00000220844 957 ntTSL 1 (best) BASIC12.88□□□□□ -0.35
Chrna5Q2MKA5 Adamts10-201ENSMUST00000087623 4043 ntAPPRIS P1 TSL 5 BASIC12.88□□□□□ -0.35
Chrna5Q2MKA5 Als2cr12-206ENSMUST00000191565 1489 ntAPPRIS ALT2 TSL 1 (best) BASIC12.88□□□□□ -0.35
Chrna5Q2MKA5 Arl8b-201ENSMUST00000032196 4443 ntAPPRIS P1 TSL 1 (best) BASIC12.88□□□□□ -0.35
Chrna5Q2MKA5 4930517G19Rik-201ENSMUST00000206152 1676 ntBASIC12.88□□□□□ -0.35
Chrna5Q2MKA5 Gm30504-201ENSMUST00000209316 1688 ntTSL 5 BASIC12.88□□□□□ -0.35
Chrna5Q2MKA5 Slc17a8-202ENSMUST00000105295 1863 ntTSL 1 (best) BASIC12.88□□□□□ -0.35
Chrna5Q2MKA5 Olfr463-203ENSMUST00000217095 1977 ntAPPRIS P1 TSL 5 BASIC12.88□□□□□ -0.35
Chrna5Q2MKA5 Ercc4-201ENSMUST00000023206 3480 ntAPPRIS P1 TSL 1 (best) BASIC12.88□□□□□ -0.35
Chrna5Q2MKA5 Trappc9-204ENSMUST00000170633 4688 ntAPPRIS ALT2 TSL 1 (best) BASIC12.88□□□□□ -0.35
Chrna5Q2MKA5 Nfe2l1-212ENSMUST00000169828 3530 ntTSL 2 BASIC12.88□□□□□ -0.35
Chrna5Q2MKA5 Tra2b-204ENSMUST00000161286 3403 ntAPPRIS P1 TSL 1 (best) BASIC12.88□□□□□ -0.35
Chrna5Q2MKA5 Rasgrp4-208ENSMUST00000161522 3242 ntTSL 5 BASIC12.88□□□□□ -0.35
Chrna5Q2MKA5 Col6a3-208ENSMUST00000188587 8285 ntTSL 5 BASIC12.88□□□□□ -0.35
Chrna5Q2MKA5 Ntrk2-208ENSMUST00000225583 2719 ntBASIC12.88□□□□□ -0.35
Chrna5Q2MKA5 C2-201ENSMUST00000025230 2641 ntAPPRIS P1 TSL 1 (best) BASIC12.88□□□□□ -0.35
Chrna5Q2MKA5 Gm42521-201ENSMUST00000199190 2040 ntBASIC12.88□□□□□ -0.35
Chrna5Q2MKA5 Dph5-202ENSMUST00000106505 1836 ntTSL 1 (best) BASIC12.88□□□□□ -0.35
Chrna5Q2MKA5 AC131081.1-201ENSMUST00000219535 1736 ntTSL 1 (best) BASIC12.88□□□□□ -0.35
Chrna5Q2MKA5 9530059O14Rik-204ENSMUST00000215759 1606 ntTSL 1 (best) BASIC12.88□□□□□ -0.35
Chrna5Q2MKA5 Gm6713-201ENSMUST00000216137 1446 ntBASIC12.88□□□□□ -0.35
Chrna5Q2MKA5 Serhl-205ENSMUST00000166427 2577 ntAPPRIS ALT2 TSL 1 (best) BASIC12.87□□□□□ -0.35
Chrna5Q2MKA5 Irf9-202ENSMUST00000130697 2459 ntAPPRIS P3 TSL 1 (best) BASIC12.87□□□□□ -0.35
Chrna5Q2MKA5 Mybpc3-202ENSMUST00000137942 4134 ntAPPRIS ALT2 TSL 5 BASIC12.87□□□□□ -0.35
Chrna5Q2MKA5 A130010J15Rik-204ENSMUST00000161235 2097 ntAPPRIS P1 TSL 1 (best) BASIC12.87□□□□□ -0.35
Chrna5Q2MKA5 Mindy1-202ENSMUST00000107187 2827 ntAPPRIS P1 TSL 1 (best) BASIC12.87□□□□□ -0.35
Chrna5Q2MKA5 Mindy1-201ENSMUST00000039537 2800 ntTSL 1 (best) BASIC12.87□□□□□ -0.35
Chrna5Q2MKA5 4933434E20Rik-206ENSMUST00000160640 2510 ntAPPRIS P1 TSL 1 (best) BASIC12.87□□□□□ -0.35
Chrna5Q2MKA5 Tubgcp4-201ENSMUST00000039541 4206 ntAPPRIS P3 TSL 1 (best) BASIC12.87□□□□□ -0.35
Chrna5Q2MKA5 Mypopos-202ENSMUST00000205975 2321 ntBASIC12.87□□□□□ -0.35
Chrna5Q2MKA5 Kif1a-201ENSMUST00000086819 5097 ntTSL 1 (best) BASIC12.87□□□□□ -0.35
Chrna5Q2MKA5 Mroh5-202ENSMUST00000110021 2145 ntAPPRIS ALT2 TSL 1 (best) BASIC12.87□□□□□ -0.35
Chrna5Q2MKA5 Psme2-201ENSMUST00000111378 795 ntTSL 5 BASIC12.87□□□□□ -0.35
Chrna5Q2MKA5 Gm15472-201ENSMUST00000141652 847 ntTSL 5 BASIC12.87□□□□□ -0.35
Chrna5Q2MKA5 Gm13842-202ENSMUST00000156331 865 ntTSL 1 (best) BASIC12.87□□□□□ -0.35
Chrna5Q2MKA5 Gm17107-201ENSMUST00000170983 553 ntBASIC12.87□□□□□ -0.35
Chrna5Q2MKA5 Itgb1bp1-202ENSMUST00000172834 801 ntTSL 1 (best) BASIC12.87□□□□□ -0.35
Chrna5Q2MKA5 Mir6396-201ENSMUST00000183603 111 ntBASIC12.87□□□□□ -0.35
Chrna5Q2MKA5 Gm7255-201ENSMUST00000187371 908 ntBASIC12.87□□□□□ -0.35
Chrna5Q2MKA5 Gm38313-201ENSMUST00000191953 1266 ntBASIC12.87□□□□□ -0.35
Chrna5Q2MKA5 Gm31466-201ENSMUST00000195457 916 ntTSL 3 BASIC12.87□□□□□ -0.35
Chrna5Q2MKA5 Ckb-ps2-201ENSMUST00000198886 1001 ntBASIC12.87□□□□□ -0.35
Chrna5Q2MKA5 Gm5650-201ENSMUST00000209641 598 ntBASIC12.87□□□□□ -0.35
Chrna5Q2MKA5 Gm18124-201ENSMUST00000210695 706 ntBASIC12.87□□□□□ -0.35
Chrna5Q2MKA5 CAAA01125382.3-201ENSMUST00000215277 643 ntBASIC12.87□□□□□ -0.35
Chrna5Q2MKA5 CU025215.1-201ENSMUST00000222986 603 ntBASIC12.87□□□□□ -0.35
Chrna5Q2MKA5 Olfr456-201ENSMUST00000057251 1052 ntAPPRIS P1 BASIC12.87□□□□□ -0.35
Chrna5Q2MKA5 Olfr47-201ENSMUST00000078057 1059 ntAPPRIS P1 BASIC12.87□□□□□ -0.35
Chrna5Q2MKA5 Supt4a-201ENSMUST00000093955 706 ntAPPRIS P1 TSL 1 (best) BASIC12.87□□□□□ -0.35
Chrna5Q2MKA5 Zfp689-201ENSMUST00000053392 3621 ntAPPRIS P1 TSL 1 (best) BASIC12.87□□□□□ -0.35
Chrna5Q2MKA5 Hoxa9-201ENSMUST00000048680 3226 ntAPPRIS P1 TSL 1 (best) BASIC12.87□□□□□ -0.35
Chrna5Q2MKA5 Brap-202ENSMUST00000111765 3861 ntTSL 1 (best) BASIC12.87□□□□□ -0.35
Chrna5Q2MKA5 Slc1a4-201ENSMUST00000004634 3872 ntAPPRIS ALT2 TSL 1 (best) BASIC12.87□□□□□ -0.35
Chrna5Q2MKA5 1600014C10Rik-201ENSMUST00000067854 3143 ntAPPRIS P1 TSL 5 BASIC12.87□□□□□ -0.35
Chrna5Q2MKA5 Stxbp2-207ENSMUST00000160708 2908 ntAPPRIS P1 TSL 1 (best) BASIC12.87□□□□□ -0.35
Chrna5Q2MKA5 Mapk8ip3-202ENSMUST00000115228 5424 ntAPPRIS ALT2 TSL 1 (best) BASIC12.87□□□□□ -0.35
Chrna5Q2MKA5 Gtf2ird2-201ENSMUST00000016086 3482 ntAPPRIS P1 TSL 1 (best) BASIC12.87□□□□□ -0.35
Chrna5Q2MKA5 Gm45003-201ENSMUST00000205875 2158 ntBASIC12.87□□□□□ -0.35
Chrna5Q2MKA5 Fcrl1-206ENSMUST00000194786 1540 ntAPPRIS ALT2 TSL 1 (best) BASIC12.87□□□□□ -0.35
Chrna5Q2MKA5 Esr1-204ENSMUST00000105590 6339 ntAPPRIS P1 TSL 1 (best) BASIC12.87□□□□□ -0.35
Chrna5Q2MKA5 Trmt2a-207ENSMUST00000140206 3520 ntTSL 1 (best) BASIC12.87□□□□□ -0.35
Chrna5Q2MKA5 Slc4a8-204ENSMUST00000162049 3532 ntAPPRIS ALT2 TSL 1 (best) BASIC12.87□□□□□ -0.35
Chrna5Q2MKA5 Zc3h4-202ENSMUST00000209289 5853 ntAPPRIS ALT2 TSL 5 BASIC12.87□□□□□ -0.35
Chrna5Q2MKA5 Maats1-201ENSMUST00000023501 2750 ntAPPRIS P2 TSL 1 (best) BASIC12.86□□□□□ -0.35
Chrna5Q2MKA5 Gramd1b-201ENSMUST00000045682 7488 ntAPPRIS P2 TSL 1 (best) BASIC12.86□□□□□ -0.35
Chrna5Q2MKA5 Pabpc4-204ENSMUST00000106243 3111 ntAPPRIS ALT1 TSL 5 BASIC12.86□□□□□ -0.35
Chrna5Q2MKA5 Gtf2ird1-206ENSMUST00000111244 3461 ntAPPRIS ALT2 TSL 1 (best) BASIC12.86□□□□□ -0.35
Chrna5Q2MKA5 Mrps35-201ENSMUST00000036111 4162 ntAPPRIS P1 TSL 1 (best) BASIC12.86□□□□□ -0.35
Chrna5Q2MKA5 Tceanc-202ENSMUST00000112188 4050 ntAPPRIS P1 TSL 1 (best) BASIC12.86□□□□□ -0.35
Chrna5Q2MKA5 Ces3b-201ENSMUST00000074403 1907 ntTSL 1 (best) BASIC12.86□□□□□ -0.35
Chrna5Q2MKA5 Phc1-211ENSMUST00000161054 3612 ntAPPRIS ALT2 TSL 1 (best) BASIC12.86□□□□□ -0.35
Chrna5Q2MKA5 1700022A22Rik-202ENSMUST00000187130 1458 ntTSL 5 BASIC12.86□□□□□ -0.35
Chrna5Q2MKA5 Gbf1-201ENSMUST00000026254 6450 ntAPPRIS P1 TSL 1 (best) BASIC12.86□□□□□ -0.35
Chrna5Q2MKA5 Ldb3-201ENSMUST00000022327 5119 ntAPPRIS P4 TSL 1 (best) BASIC12.86□□□□□ -0.35
Chrna5Q2MKA5 Mad1l1-201ENSMUST00000031534 2640 ntAPPRIS P1 TSL 1 (best) BASIC12.86□□□□□ -0.35
Chrna5Q2MKA5 Mapt-204ENSMUST00000106992 5253 ntAPPRIS ALT2 TSL 1 (best) BASIC12.86□□□□□ -0.35
Chrna5Q2MKA5 Rsc1a1-201ENSMUST00000105782 1749 ntAPPRIS P1 BASIC12.86□□□□□ -0.35
Chrna5Q2MKA5 Pigh-203ENSMUST00000217998 2868 ntTSL 1 (best) BASIC12.86□□□□□ -0.35
Chrna5Q2MKA5 Best1-201ENSMUST00000117346 2080 ntAPPRIS P1 TSL 5 BASIC12.86□□□□□ -0.35
Chrna5Q2MKA5 Mir291b-201ENSMUST00000104838 79 ntBASIC12.86□□□□□ -0.35
Chrna5Q2MKA5 Rab29-202ENSMUST00000112386 1202 ntAPPRIS P1 TSL 1 (best) BASIC12.86□□□□□ -0.35
Chrna5Q2MKA5 Olfr1060-ps1-201ENSMUST00000118335 943 ntBASIC12.86□□□□□ -0.35
Chrna5Q2MKA5 Sgcg-202ENSMUST00000121148 1298 ntAPPRIS P1 TSL 1 (best) BASIC12.86□□□□□ -0.35
Chrna5Q2MKA5 4930529I22Rik-201ENSMUST00000131509 589 ntTSL 1 (best) BASIC12.86□□□□□ -0.35
Chrna5Q2MKA5 Bud31-203ENSMUST00000160075 928 ntAPPRIS P1 TSL 2 BASIC12.86□□□□□ -0.35
Chrna5Q2MKA5 Mir3091-201ENSMUST00000175086 76 ntBASIC12.86□□□□□ -0.35
Retrieved 100 of 76,532 protein–RNA pairs in 52.7 ms