Protein–RNA interactions for Protein: Q07802

Ebf1, Transcription factor COE1, mousemouse

Predictions only

Length 591 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ebf1Q07802 Prr30-202ENSMUST00000187304 2104 ntAPPRIS P1 TSL 5 BASIC11.08□□□□□ -0.64
Ebf1Q07802 Mab21l1-201ENSMUST00000075422 2492 ntAPPRIS P1 BASIC11.08□□□□□ -0.64
Ebf1Q07802 Krba1-202ENSMUST00000077093 8380 ntTSL 1 (best) BASIC11.08□□□□□ -0.64
Ebf1Q07802 Ccdc78-201ENSMUST00000095500 1651 ntAPPRIS P1 TSL 5 BASIC11.08□□□□□ -0.64
Ebf1Q07802 Mbtps2-203ENSMUST00000112522 3891 ntTSL 2 BASIC11.08□□□□□ -0.64
Ebf1Q07802 Mbtps2-208ENSMUST00000179062 3890 ntAPPRIS P1 TSL 2 BASIC11.08□□□□□ -0.64
Ebf1Q07802 Gm14025-201ENSMUST00000145798 4242 ntAPPRIS P1 TSL 5 BASIC11.08□□□□□ -0.64
Ebf1Q07802 Sh3pxd2a-202ENSMUST00000111800 10380 ntAPPRIS ALT2 TSL 1 (best) BASIC11.08□□□□□ -0.64
Ebf1Q07802 Grem1-201ENSMUST00000099575 4148 ntAPPRIS P1 TSL 1 (best) BASIC11.07□□□□□ -0.64
Ebf1Q07802 Spock2-203ENSMUST00000165024 3699 ntAPPRIS ALT2 TSL 5 BASIC11.07□□□□□ -0.64
Ebf1Q07802 Itgal-204ENSMUST00000120857 4533 ntAPPRIS ALT2 TSL 1 (best) BASIC11.07□□□□□ -0.64
Ebf1Q07802 Etv1-205ENSMUST00000160856 1474 ntTSL 5 BASIC11.07□□□□□ -0.64
Ebf1Q07802 Eno3-201ENSMUST00000072841 1454 ntAPPRIS P1 TSL 1 (best) BASIC11.07□□□□□ -0.64
Ebf1Q07802 Sdccag8-201ENSMUST00000027785 2776 ntAPPRIS P1 TSL 1 (best) BASIC11.07□□□□□ -0.64
Ebf1Q07802 Odf2l-204ENSMUST00000106192 2425 ntAPPRIS P1 TSL 5 BASIC11.07□□□□□ -0.64
Ebf1Q07802 Grm1-201ENSMUST00000044306 6930 ntAPPRIS P3 TSL 1 (best) BASIC11.07□□□□□ -0.64
Ebf1Q07802 Spata7-201ENSMUST00000048402 2052 ntAPPRIS P1 TSL 1 (best) BASIC11.07□□□□□ -0.64
Ebf1Q07802 Car12-202ENSMUST00000085420 3639 ntAPPRIS ALT2 TSL 1 (best) BASIC11.07□□□□□ -0.64
Ebf1Q07802 Gm26868-201ENSMUST00000181927 2655 ntTSL 1 (best) BASIC11.07□□□□□ -0.64
Ebf1Q07802 Als2cl-203ENSMUST00000130386 5056 ntAPPRIS P1 TSL 1 (best) BASIC11.07□□□□□ -0.64
Ebf1Q07802 Gm43152-201ENSMUST00000202495 1638 ntBASIC11.07□□□□□ -0.64
Ebf1Q07802 Gm44740-201ENSMUST00000205603 1614 ntBASIC11.07□□□□□ -0.64
Ebf1Q07802 Sass6-204ENSMUST00000197335 2458 ntTSL 1 (best) BASIC11.07□□□□□ -0.64
Ebf1Q07802 Lysmd4-202ENSMUST00000179106 3319 ntAPPRIS ALT2 TSL 2 BASIC11.07□□□□□ -0.64
Ebf1Q07802 Zmynd11-203ENSMUST00000110634 3824 ntAPPRIS P1 TSL 5 BASIC11.07□□□□□ -0.64
Ebf1Q07802 Fam107b-202ENSMUST00000115052 861 ntTSL 3 BASIC11.07□□□□□ -0.64
Ebf1Q07802 Gm16217-201ENSMUST00000124182 616 ntTSL 3 BASIC11.07□□□□□ -0.64
Ebf1Q07802 1700057H21Rik-202ENSMUST00000154530 506 ntTSL 1 (best) BASIC11.07□□□□□ -0.64
Ebf1Q07802 Gm29642-201ENSMUST00000186170 921 ntTSL 2 BASIC11.07□□□□□ -0.64
Ebf1Q07802 Gm8369-204ENSMUST00000188633 1227 ntAPPRIS P1 TSL 3 BASIC11.07□□□□□ -0.64
Ebf1Q07802 Gm20781-201ENSMUST00000193154 693 ntBASIC11.07□□□□□ -0.64
Ebf1Q07802 Gm6606-201ENSMUST00000193613 947 ntBASIC11.07□□□□□ -0.64
Ebf1Q07802 Gm38324-201ENSMUST00000194390 411 ntTSL 3 BASIC11.07□□□□□ -0.64
Ebf1Q07802 Gm21736-201ENSMUST00000195399 693 ntBASIC11.07□□□□□ -0.64
Ebf1Q07802 Gm37197-201ENSMUST00000195607 401 ntBASIC11.07□□□□□ -0.64
Ebf1Q07802 Gm42867-201ENSMUST00000202995 469 ntBASIC11.07□□□□□ -0.64
Ebf1Q07802 Itgax-203ENSMUST00000205460 1215 ntTSL 1 (best) BASIC11.07□□□□□ -0.64
Ebf1Q07802 Ftl1-204ENSMUST00000210864 503 ntTSL 5 BASIC11.07□□□□□ -0.64
Ebf1Q07802 Gm5907-202ENSMUST00000210969 661 ntTSL 1 (best) BASIC11.07□□□□□ -0.64
Ebf1Q07802 Gm45572-201ENSMUST00000211774 750 ntTSL 5 BASIC11.07□□□□□ -0.64
Ebf1Q07802 Tpi-rs4-201ENSMUST00000213734 720 ntBASIC11.07□□□□□ -0.64
Ebf1Q07802 AC162938.2-202ENSMUST00000215497 722 ntTSL 5 BASIC11.07□□□□□ -0.64
Ebf1Q07802 Prss51-204ENSMUST00000224112 1042 ntAPPRIS P1 BASIC11.07□□□□□ -0.64
Ebf1Q07802 Gm7735-201ENSMUST00000089098 159 ntAPPRIS P1 BASIC11.07□□□□□ -0.64
Ebf1Q07802 Gm6478-201ENSMUST00000099450 742 ntBASIC11.07□□□□□ -0.64
Ebf1Q07802 Fsd2-201ENSMUST00000042318 3985 ntAPPRIS P1 TSL 2 BASIC11.07□□□□□ -0.64
Ebf1Q07802 Tia1-206ENSMUST00000113713 3108 ntAPPRIS ALT2 TSL 1 (best) BASIC11.07□□□□□ -0.64
Ebf1Q07802 Dhdds-201ENSMUST00000012262 3133 ntAPPRIS P2 TSL 1 (best) BASIC11.07□□□□□ -0.64
Ebf1Q07802 Slc26a2-202ENSMUST00000146409 7814 ntAPPRIS P1 TSL 1 (best) BASIC11.07□□□□□ -0.64
Ebf1Q07802 Ttc14-201ENSMUST00000099153 9661 ntAPPRIS P3 TSL 1 (best) BASIC11.07□□□□□ -0.64
Ebf1Q07802 Plekhb1-205ENSMUST00000107046 2793 ntAPPRIS ALT1 TSL 1 (best) BASIC11.07□□□□□ -0.64
Ebf1Q07802 Ces2f-203ENSMUST00000212926 1430 ntTSL 1 (best) BASIC11.07□□□□□ -0.64
Ebf1Q07802 Olfr601-203ENSMUST00000214110 2196 ntAPPRIS P1 TSL 5 BASIC11.07□□□□□ -0.64
Ebf1Q07802 Olfr601-204ENSMUST00000217416 2195 ntAPPRIS P1 TSL 5 BASIC11.07□□□□□ -0.64
Ebf1Q07802 Ccdc162-212ENSMUST00000219054 3182 ntTSL 5 BASIC11.07□□□□□ -0.64
Ebf1Q07802 Ric8a-201ENSMUST00000026558 3406 ntAPPRIS P1 TSL 1 (best) BASIC11.07□□□□□ -0.64
Ebf1Q07802 Rps9-202ENSMUST00000108623 1347 ntTSL 1 (best) BASIC11.07□□□□□ -0.64
Ebf1Q07802 Kif3b-201ENSMUST00000028977 5635 ntAPPRIS P1 TSL 1 (best) BASIC11.07□□□□□ -0.64
Ebf1Q07802 Eya2-201ENSMUST00000063433 2460 ntAPPRIS P1 TSL 1 (best) BASIC11.07□□□□□ -0.64
Ebf1Q07802 1600014C10Rik-201ENSMUST00000067854 3143 ntAPPRIS P1 TSL 5 BASIC11.07□□□□□ -0.64
Ebf1Q07802 Zfp518b-203ENSMUST00000179555 6816 ntAPPRIS P1 TSL 2 BASIC11.06□□□□□ -0.64
Ebf1Q07802 Ccdc15-206ENSMUST00000217238 1747 ntAPPRIS ALT2 TSL 1 (best) BASIC11.06□□□□□ -0.64
Ebf1Q07802 Npl-201ENSMUST00000041874 1735 ntAPPRIS P1 TSL 1 (best) BASIC11.06□□□□□ -0.64
Ebf1Q07802 Krt75-201ENSMUST00000042957 3266 ntAPPRIS P1 TSL 1 (best) BASIC11.06□□□□□ -0.64
Ebf1Q07802 Prx-202ENSMUST00000098644 4841 ntTSL 1 (best) BASIC11.06□□□□□ -0.64
Ebf1Q07802 Phka2-203ENSMUST00000112377 3947 ntAPPRIS P3 TSL 1 (best) BASIC11.06□□□□□ -0.64
Ebf1Q07802 Megf11-203ENSMUST00000118485 3944 ntAPPRIS P1 TSL 5 BASIC11.06□□□□□ -0.64
Ebf1Q07802 Fn1-201ENSMUST00000055226 8315 ntAPPRIS P3 TSL 1 (best) BASIC11.06□□□□□ -0.64
Ebf1Q07802 Rai1-203ENSMUST00000102688 6921 ntAPPRIS P1 TSL 5 BASIC11.06□□□□□ -0.64
Ebf1Q07802 Ap1s2-203ENSMUST00000112294 3199 ntTSL 1 (best) BASIC11.06□□□□□ -0.64
Ebf1Q07802 Shc1-210ENSMUST00000191485 3154 ntAPPRIS P3 TSL 1 (best) BASIC11.06□□□□□ -0.64
Ebf1Q07802 Slit2-216ENSMUST00000174313 7734 ntAPPRIS ALT2 TSL 1 (best) BASIC11.06□□□□□ -0.64
Ebf1Q07802 Ncstn-201ENSMUST00000003550 2901 ntAPPRIS P1 TSL 1 (best) BASIC11.06□□□□□ -0.64
Ebf1Q07802 Nit1-203ENSMUST00000111296 1394 ntTSL 5 BASIC11.06□□□□□ -0.64
Ebf1Q07802 Cxcr5-202ENSMUST00000179828 2824 ntAPPRIS P1 TSL 5 BASIC11.06□□□□□ -0.64
Ebf1Q07802 Samhd1-203ENSMUST00000109549 3245 ntAPPRIS ALT2 TSL 1 (best) BASIC11.06□□□□□ -0.64
Ebf1Q07802 Elovl7-201ENSMUST00000022207 4013 ntAPPRIS P1 TSL 1 (best) BASIC11.06□□□□□ -0.64
Ebf1Q07802 Piwil1-201ENSMUST00000086056 4016 ntAPPRIS P2 TSL 1 (best) BASIC11.06□□□□□ -0.64
Ebf1Q07802 St14-201ENSMUST00000034478 3259 ntAPPRIS P1 TSL 1 (best) BASIC11.06□□□□□ -0.64
Ebf1Q07802 Hint1-202ENSMUST00000117710 580 ntTSL 2 BASIC11.06□□□□□ -0.64
Ebf1Q07802 Gm6630-201ENSMUST00000119199 454 ntBASIC11.06□□□□□ -0.64
Ebf1Q07802 Isg20-203ENSMUST00000120331 845 ntAPPRIS P1 TSL 1 (best) BASIC11.06□□□□□ -0.64
Ebf1Q07802 Gm14055-201ENSMUST00000130262 668 ntTSL 5 BASIC11.06□□□□□ -0.64
Ebf1Q07802 Gm27191-201ENSMUST00000145973 448 ntTSL 3 BASIC11.06□□□□□ -0.64
Ebf1Q07802 Bnip2-208ENSMUST00000165389 945 ntAPPRIS ALT2 TSL 1 (best) BASIC11.06□□□□□ -0.64
Ebf1Q07802 Snord55-201ENSMUST00000174939 79 ntBASIC11.06□□□□□ -0.64
Ebf1Q07802 Gm24954-201ENSMUST00000178831 110 ntBASIC11.06□□□□□ -0.64
Ebf1Q07802 Gm8384-201ENSMUST00000190905 704 ntBASIC11.06□□□□□ -0.64
Ebf1Q07802 Gm43854-201ENSMUST00000200418 394 ntBASIC11.06□□□□□ -0.64
Ebf1Q07802 Gm43966-201ENSMUST00000203301 612 ntBASIC11.06□□□□□ -0.64
Ebf1Q07802 Gm45388-201ENSMUST00000209922 1132 ntTSL 5 BASIC11.06□□□□□ -0.64
Ebf1Q07802 Gm6331-201ENSMUST00000217890 450 ntBASIC11.06□□□□□ -0.64
Ebf1Q07802 Mrpl33-201ENSMUST00000031024 478 ntAPPRIS P1 TSL 1 (best) BASIC11.06□□□□□ -0.64
Ebf1Q07802 Eif4ebp3-201ENSMUST00000036765 744 ntAPPRIS P1 TSL 1 (best) BASIC11.06□□□□□ -0.64
Ebf1Q07802 Olfr1313-201ENSMUST00000099599 938 ntAPPRIS P1 BASIC11.06□□□□□ -0.64
Ebf1Q07802 Zfp280d-205ENSMUST00000183468 1834 ntTSL 1 (best) BASIC11.06□□□□□ -0.64
Ebf1Q07802 Zfp36-201ENSMUST00000051241 2790 ntAPPRIS P2 TSL 1 (best) BASIC11.06□□□□□ -0.64
Ebf1Q07802 Camk2g-201ENSMUST00000071816 3703 ntTSL 1 (best) BASIC11.06□□□□□ -0.64
Ebf1Q07802 Syk-202ENSMUST00000118756 2519 ntAPPRIS ALT2 TSL 1 (best) BASIC11.06□□□□□ -0.64
Ebf1Q07802 Rxfp2-201ENSMUST00000065745 2539 ntAPPRIS P3 TSL 1 (best) BASIC11.06□□□□□ -0.64
Retrieved 100 of 76,532 protein–RNA pairs in 34.3 ms