Protein–RNA interactions for Protein: P63158

Hmgb1, High mobility group protein B1, mousemouse

Known RBP Predictions only

Length 215 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Hmgb1P63158 Abhd18-201ENSMUST00000108077 3277 ntAPPRIS P1 TSL 1 (best) BASIC12.03□□□□□ -0.48
Hmgb1P63158 Ttc7b-206ENSMUST00000223020 3307 ntTSL 5 BASIC12.03□□□□□ -0.48
Hmgb1P63158 AA474408-201ENSMUST00000098110 3339 ntBASIC12.03□□□□□ -0.48
Hmgb1P63158 9530059O14Rik-201ENSMUST00000181107 3978 ntTSL 1 (best) BASIC12.03□□□□□ -0.48
Hmgb1P63158 Gm45017-201ENSMUST00000206842 1777 ntTSL 1 (best) BASIC12.02□□□□□ -0.48
Hmgb1P63158 Cyp2c54-201ENSMUST00000048959 1769 ntAPPRIS P1 TSL 2 BASIC12.02□□□□□ -0.48
Hmgb1P63158 Sod3-201ENSMUST00000101208 3738 ntAPPRIS P1 TSL 1 (best) BASIC12.02□□□□□ -0.48
Hmgb1P63158 Spdye4a-203ENSMUST00000195900 1496 ntAPPRIS ALT2 TSL 5 BASIC12.02□□□□□ -0.48
Hmgb1P63158 Ar-201ENSMUST00000052837 10048 ntAPPRIS P1 TSL 1 (best) BASIC12.02□□□□□ -0.48
Hmgb1P63158 Gm38357-201ENSMUST00000195382 2464 ntBASIC12.02□□□□□ -0.48
Hmgb1P63158 Tmem88b-201ENSMUST00000097742 3471 ntAPPRIS P1 TSL 1 (best) BASIC12.02□□□□□ -0.48
Hmgb1P63158 Otof-201ENSMUST00000074171 7129 ntAPPRIS P1 TSL 1 (best) BASIC12.02□□□□□ -0.48
Hmgb1P63158 Calu-201ENSMUST00000031779 3229 ntAPPRIS P5 TSL 1 (best) BASIC12.02□□□□□ -0.48
Hmgb1P63158 Prg4-201ENSMUST00000006171 1869 ntTSL 1 (best) BASIC12.02□□□□□ -0.48
Hmgb1P63158 Bcl7a-202ENSMUST00000117971 4642 ntTSL 1 (best) BASIC12.02□□□□□ -0.48
Hmgb1P63158 Tnxb-201ENSMUST00000087399 12209 ntAPPRIS P1 TSL 5 BASIC12.02□□□□□ -0.48
Hmgb1P63158 Mcf2l-222ENSMUST00000173099 6081 ntTSL 5 BASIC12.02□□□□□ -0.48
Hmgb1P63158 Gm10829-201ENSMUST00000202084 2988 ntBASIC12.02□□□□□ -0.49
Hmgb1P63158 Txnrd1-201ENSMUST00000020484 3325 ntAPPRIS P1 TSL 1 (best) BASIC12.02□□□□□ -0.49
Hmgb1P63158 Cln8-201ENSMUST00000027554 6857 ntAPPRIS P1 TSL 1 (best) BASIC12.02□□□□□ -0.49
Hmgb1P63158 Polq-202ENSMUST00000071452 7290 ntTSL 1 (best) BASIC12.02□□□□□ -0.49
Hmgb1P63158 Ddx11-201ENSMUST00000163605 4149 ntAPPRIS P2 TSL 5 BASIC12.02□□□□□ -0.49
Hmgb1P63158 Recql-202ENSMUST00000100832 3054 ntAPPRIS ALT2 TSL 1 (best) BASIC12.02□□□□□ -0.49
Hmgb1P63158 Gm15573-201ENSMUST00000119487 540 ntBASIC12.02□□□□□ -0.49
Hmgb1P63158 Gm14942-201ENSMUST00000119642 336 ntBASIC12.02□□□□□ -0.49
Hmgb1P63158 Bloc1s1-205ENSMUST00000153731 613 ntTSL 5 BASIC12.02□□□□□ -0.49
Hmgb1P63158 Hmgn3-201ENSMUST00000161796 862 ntAPPRIS ALT1 TSL 1 (best) BASIC12.02□□□□□ -0.49
Hmgb1P63158 Snord55-201ENSMUST00000174939 79 ntBASIC12.02□□□□□ -0.49
Hmgb1P63158 1700027J07Rik-202ENSMUST00000215747 1060 ntTSL 1 (best) BASIC12.02□□□□□ -0.49
Hmgb1P63158 AC154589.2-201ENSMUST00000228847 251 ntBASIC12.02□□□□□ -0.49
Hmgb1P63158 Hcst-201ENSMUST00000075062 442 ntAPPRIS P1 TSL 1 (best) BASIC12.02□□□□□ -0.49
Hmgb1P63158 Olfr959-201ENSMUST00000079178 1055 ntAPPRIS P1 BASIC12.02□□□□□ -0.49
Hmgb1P63158 Mok-203ENSMUST00000084974 1132 ntTSL 1 (best) BASIC12.02□□□□□ -0.49
Hmgb1P63158 Npl-201ENSMUST00000041874 1735 ntAPPRIS P1 TSL 1 (best) BASIC12.02□□□□□ -0.49
Hmgb1P63158 Mei4-203ENSMUST00000189832 2578 ntAPPRIS ALT2 TSL 1 (best) BASIC12.02□□□□□ -0.49
Hmgb1P63158 Inpp4a-202ENSMUST00000058307 2963 ntTSL 1 (best) BASIC12.02□□□□□ -0.49
Hmgb1P63158 Ttll13-201ENSMUST00000058266 3010 ntAPPRIS P1 TSL 5 BASIC12.02□□□□□ -0.49
Hmgb1P63158 Smco1-201ENSMUST00000093183 1408 ntAPPRIS P1 TSL 5 BASIC12.02□□□□□ -0.49
Hmgb1P63158 Odf2-208ENSMUST00000113763 2364 ntAPPRIS P3 TSL 5 BASIC12.01□□□□□ -0.49
Hmgb1P63158 Sept2-201ENSMUST00000027495 3779 ntAPPRIS P1 TSL 1 (best) BASIC12.01□□□□□ -0.49
Hmgb1P63158 Ncapd3-205ENSMUST00000216677 5149 ntAPPRIS P2 TSL 1 (best) BASIC12.01□□□□□ -0.49
Hmgb1P63158 Pa2g4-202ENSMUST00000131728 2483 ntAPPRIS P1 TSL 1 (best) BASIC12.01□□□□□ -0.49
Hmgb1P63158 Olfr169-203ENSMUST00000215476 2476 ntAPPRIS P1 TSL 5 BASIC12.01□□□□□ -0.49
Hmgb1P63158 Pomt1-201ENSMUST00000036473 2918 ntAPPRIS P1 TSL 1 (best) BASIC12.01□□□□□ -0.49
Hmgb1P63158 Zfp964-203ENSMUST00000204285 4333 ntAPPRIS P1 TSL 1 (best) BASIC12.01□□□□□ -0.49
Hmgb1P63158 Gm45675-201ENSMUST00000211202 3429 ntBASIC12.01□□□□□ -0.49
Hmgb1P63158 Catsper1-201ENSMUST00000043380 2061 ntAPPRIS P1 TSL 1 (best) BASIC12.01□□□□□ -0.49
Hmgb1P63158 Gm4900-201ENSMUST00000222046 1628 ntBASIC12.01□□□□□ -0.49
Hmgb1P63158 Chp1-202ENSMUST00000119172 3027 ntTSL 2 BASIC12.01□□□□□ -0.49
Hmgb1P63158 4931406C07Rik-201ENSMUST00000034414 2562 ntAPPRIS P1 TSL 1 (best) BASIC12.01□□□□□ -0.49
Hmgb1P63158 Tsen2-201ENSMUST00000040234 2106 ntAPPRIS P1 TSL 1 (best) BASIC12.01□□□□□ -0.49
Hmgb1P63158 Atp11c-202ENSMUST00000101527 6044 ntAPPRIS P4 TSL 1 (best) BASIC12.01□□□□□ -0.49
Hmgb1P63158 Ube2c-201ENSMUST00000001439 2191 ntTSL 1 (best) BASIC12.01□□□□□ -0.49
Hmgb1P63158 Cacna1c-219ENSMUST00000189389 6603 ntAPPRIS ALT2 TSL 5 BASIC12.01□□□□□ -0.49
Hmgb1P63158 Brd4-202ENSMUST00000114475 2731 ntTSL 1 (best) BASIC12.01□□□□□ -0.49
Hmgb1P63158 Scaf1-201ENSMUST00000085383 4293 ntAPPRIS P1 TSL 1 (best) BASIC12.01□□□□□ -0.49
Hmgb1P63158 Gm37333-201ENSMUST00000192904 2251 ntBASIC12.01□□□□□ -0.49
Hmgb1P63158 Ctrc-202ENSMUST00000105781 784 ntTSL 1 (best) BASIC12.01□□□□□ -0.49
Hmgb1P63158 Cdc42se1-204ENSMUST00000107201 907 ntAPPRIS P1 TSL 1 (best) BASIC12.01□□□□□ -0.49
Hmgb1P63158 Rtn2-202ENSMUST00000108468 1076 ntAPPRIS ALT2 TSL 1 (best) BASIC12.01□□□□□ -0.49
Hmgb1P63158 Xlr4c-204ENSMUST00000114531 1104 ntAPPRIS P1 TSL 2 BASIC12.01□□□□□ -0.49
Hmgb1P63158 Gm12136-201ENSMUST00000120460 1209 ntBASIC12.01□□□□□ -0.49
Hmgb1P63158 Sgcg-202ENSMUST00000121148 1298 ntAPPRIS P1 TSL 1 (best) BASIC12.01□□□□□ -0.49
Hmgb1P63158 Mrgpra2a-201ENSMUST00000159004 1240 ntAPPRIS P1 TSL 1 (best) BASIC12.01□□□□□ -0.49
Hmgb1P63158 Gm16587-201ENSMUST00000161943 863 ntTSL 1 (best) BASIC12.01□□□□□ -0.49
Hmgb1P63158 Gm9555-201ENSMUST00000200908 583 ntBASIC12.01□□□□□ -0.49
Hmgb1P63158 Gm45682-201ENSMUST00000209434 1256 ntTSL 5 BASIC12.01□□□□□ -0.49
Hmgb1P63158 AC154826.1-201ENSMUST00000217369 498 ntTSL 5 BASIC12.01□□□□□ -0.49
Hmgb1P63158 Mitd1-201ENSMUST00000027257 1231 ntAPPRIS P1 TSL 1 (best) BASIC12.01□□□□□ -0.49
Hmgb1P63158 Atp5h-201ENSMUST00000043931 625 ntAPPRIS P1 TSL 1 (best) BASIC12.01□□□□□ -0.49
Hmgb1P63158 Tnni3-201ENSMUST00000098859 912 ntAPPRIS P1 TSL 1 (best) BASIC12.01□□□□□ -0.49
Hmgb1P63158 Hars2-206ENSMUST00000152954 3336 ntAPPRIS P1 TSL 1 (best) BASIC12.01□□□□□ -0.49
Hmgb1P63158 Ccdc93-202ENSMUST00000112621 2338 ntAPPRIS ALT1 TSL 1 (best) BASIC12.01□□□□□ -0.49
Hmgb1P63158 Ppp1r26-205ENSMUST00000189694 5463 ntAPPRIS P1 TSL 1 (best) BASIC12.01□□□□□ -0.49
Hmgb1P63158 Ppp1r26-201ENSMUST00000040324 5466 ntAPPRIS P1 TSL 1 (best) BASIC12.01□□□□□ -0.49
Hmgb1P63158 AI854703-201ENSMUST00000095938 3517 ntAPPRIS P1 TSL 2 BASIC12.01□□□□□ -0.49
Hmgb1P63158 Arhgap36-202ENSMUST00000114904 3033 ntAPPRIS P2 TSL 1 (best) BASIC12.01□□□□□ -0.49
Hmgb1P63158 Gm5308-201ENSMUST00000196752 1354 ntBASIC12.01□□□□□ -0.49
Hmgb1P63158 Scn8a-201ENSMUST00000082209 11293 ntAPPRIS ALT1 TSL 5 BASIC12.01□□□□□ -0.49
Hmgb1P63158 Eno3-201ENSMUST00000072841 1454 ntAPPRIS P1 TSL 1 (best) BASIC12.01□□□□□ -0.49
Hmgb1P63158 Thoc6-202ENSMUST00000095579 1450 ntAPPRIS P1 TSL 1 (best) BASIC12.01□□□□□ -0.49
Hmgb1P63158 Rtn4ip1-202ENSMUST00000105492 2059 ntTSL 3 BASIC12.01□□□□□ -0.49
Hmgb1P63158 Msh3-201ENSMUST00000022220 3937 ntAPPRIS ALT2 TSL 1 (best) BASIC12.01□□□□□ -0.49
Hmgb1P63158 Efcab14-203ENSMUST00000106524 1544 ntAPPRIS ALT2 TSL 5 BASIC12.01□□□□□ -0.49
Hmgb1P63158 Mst1r-201ENSMUST00000035203 4722 ntAPPRIS P1 TSL 1 (best) BASIC12.01□□□□□ -0.49
Hmgb1P63158 Ddr1-202ENSMUST00000097333 3593 ntAPPRIS ALT2 TSL 1 (best) BASIC12□□□□□ -0.49
Hmgb1P63158 Rtn4ip1-201ENSMUST00000054418 2981 ntAPPRIS P1 TSL 1 (best) BASIC12□□□□□ -0.49
Hmgb1P63158 Glb1l-201ENSMUST00000113623 2339 ntAPPRIS P1 TSL 5 BASIC12□□□□□ -0.49
Hmgb1P63158 Themis2-201ENSMUST00000045154 3079 ntAPPRIS P1 TSL 1 (best) BASIC12□□□□□ -0.49
Hmgb1P63158 Prdm16-205ENSMUST00000105637 8595 ntAPPRIS ALT2 TSL 1 (best) BASIC12□□□□□ -0.49
Hmgb1P63158 Prdm16-201ENSMUST00000030902 8598 ntAPPRIS P3 TSL 1 (best) BASIC12□□□□□ -0.49
Hmgb1P63158 Zbtb43-203ENSMUST00000113156 1828 ntTSL 1 (best) BASIC12□□□□□ -0.49
Hmgb1P63158 Tmem184b-202ENSMUST00000178522 3314 ntAPPRIS P1 TSL 1 (best) BASIC12□□□□□ -0.49
Hmgb1P63158 Arhgap24-203ENSMUST00000094559 3346 ntAPPRIS P1 TSL 1 (best) BASIC12□□□□□ -0.49
Hmgb1P63158 Slfn1-201ENSMUST00000037994 1864 ntAPPRIS P1 TSL 1 (best) BASIC12□□□□□ -0.49
Hmgb1P63158 Nek4-207ENSMUST00000228328 4245 ntAPPRIS P2 BASIC12□□□□□ -0.49
Hmgb1P63158 Ovch2-201ENSMUST00000106755 1953 ntAPPRIS P1 TSL 1 (best) BASIC12□□□□□ -0.49
Hmgb1P63158 Morf4l2-201ENSMUST00000033797 1996 ntAPPRIS P1 TSL 1 (best) BASIC12□□□□□ -0.49
Hmgb1P63158 Inpp4a-208ENSMUST00000137266 2934 ntTSL 5 BASIC12□□□□□ -0.49
Hmgb1P63158 Tmem254b-202ENSMUST00000100806 1108 ntTSL 1 (best) BASIC12□□□□□ -0.49
Retrieved 100 of 76,532 protein–RNA pairs in 38.1 ms