Protein–RNA interactions for Protein: F6VAN0

Atf6, Cyclic AMP-dependent transcription factor ATF-6 alpha, mousemouse

Predictions only

Length 656 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Atf6F6VAN0 Chmp3-202ENSMUST00000065364 998 ntAPPRIS P1 TSL 1 (best) BASIC11.19□□□□□ -0.62
Atf6F6VAN0 Gm10179-201ENSMUST00000086233 688 ntBASIC11.19□□□□□ -0.62
Atf6F6VAN0 Arhgap24-203ENSMUST00000094559 3346 ntAPPRIS P1 TSL 1 (best) BASIC11.19□□□□□ -0.62
Atf6F6VAN0 C130021I20Rik-201ENSMUST00000147294 3693 ntTSL 1 (best) BASIC11.19□□□□□ -0.62
Atf6F6VAN0 Gm11571-201ENSMUST00000136820 2396 ntTSL 1 (best) BASIC11.19□□□□□ -0.62
Atf6F6VAN0 Hyal1-202ENSMUST00000112387 2706 ntAPPRIS ALT2 TSL 1 (best) BASIC11.19□□□□□ -0.62
Atf6F6VAN0 Gm35021-201ENSMUST00000210105 2329 ntTSL 5 BASIC11.19□□□□□ -0.62
Atf6F6VAN0 9130227L01Rik-202ENSMUST00000189293 1906 ntTSL 1 (best) BASIC11.19□□□□□ -0.62
Atf6F6VAN0 Abcf3-201ENSMUST00000003319 3090 ntAPPRIS P1 TSL 1 (best) BASIC11.19□□□□□ -0.62
Atf6F6VAN0 Cfap53-201ENSMUST00000114895 1888 ntAPPRIS P1 TSL 1 (best) BASIC11.19□□□□□ -0.62
Atf6F6VAN0 Gm15983-201ENSMUST00000140000 4814 ntTSL 1 (best) BASIC11.19□□□□□ -0.62
Atf6F6VAN0 Olfr742-203ENSMUST00000217437 2244 ntAPPRIS P1 TSL 5 BASIC11.19□□□□□ -0.62
Atf6F6VAN0 Gm26912-201ENSMUST00000180988 1483 ntTSL 1 (best) BASIC11.19□□□□□ -0.62
Atf6F6VAN0 Cwc25-202ENSMUST00000107579 1838 ntAPPRIS ALT2 TSL 1 (best) BASIC11.19□□□□□ -0.62
Atf6F6VAN0 Tfip11-201ENSMUST00000031288 3560 ntAPPRIS P1 TSL 1 (best) BASIC11.18□□□□□ -0.62
Atf6F6VAN0 Enpp7-202ENSMUST00000106273 1408 ntAPPRIS ALT2 TSL 5 BASIC11.18□□□□□ -0.62
Atf6F6VAN0 Hmg20a-206ENSMUST00000217518 2468 ntTSL 1 (best) BASIC11.18□□□□□ -0.62
Atf6F6VAN0 Sphk2-202ENSMUST00000107737 3548 ntAPPRIS P1 TSL 1 (best) BASIC11.18□□□□□ -0.62
Atf6F6VAN0 AI854703-201ENSMUST00000095938 3517 ntAPPRIS P1 TSL 2 BASIC11.18□□□□□ -0.62
Atf6F6VAN0 Plscr3-203ENSMUST00000108633 2785 ntAPPRIS P1 TSL 1 (best) BASIC11.18□□□□□ -0.62
Atf6F6VAN0 Immt-205ENSMUST00000166938 2413 ntAPPRIS ALT2 TSL 1 (best) BASIC11.18□□□□□ -0.62
Atf6F6VAN0 Fndc7-207ENSMUST00000180063 4820 ntAPPRIS ALT2 TSL 5 BASIC11.18□□□□□ -0.62
Atf6F6VAN0 Cpsf4l-202ENSMUST00000100248 1375 ntAPPRIS ALT2 TSL 5 BASIC11.18□□□□□ -0.62
Atf6F6VAN0 Gnat3-201ENSMUST00000030561 1361 ntAPPRIS P1 TSL 1 (best) BASIC11.18□□□□□ -0.62
Atf6F6VAN0 Zer1-201ENSMUST00000044751 4100 ntTSL 1 (best) BASIC11.18□□□□□ -0.62
Atf6F6VAN0 Tnfsf13b-203ENSMUST00000207792 4771 ntAPPRIS P3 TSL 1 (best) BASIC11.18□□□□□ -0.62
Atf6F6VAN0 Lrrc8b-201ENSMUST00000112707 6726 ntAPPRIS P1 TSL 1 (best) BASIC11.18□□□□□ -0.62
Atf6F6VAN0 Slc29a3-201ENSMUST00000117513 5240 ntAPPRIS P1 TSL 1 (best) BASIC11.18□□□□□ -0.62
Atf6F6VAN0 Hoxa1-201ENSMUST00000000964 2251 ntAPPRIS P1 TSL 1 (best) BASIC11.18□□□□□ -0.62
Atf6F6VAN0 Wdr45-206ENSMUST00000116634 1250 ntAPPRIS ALT2 TSL 5 BASIC11.18□□□□□ -0.62
Atf6F6VAN0 Gm13830-203ENSMUST00000148916 247 ntTSL 1 (best) BASIC11.18□□□□□ -0.62
Atf6F6VAN0 Gm15063-201ENSMUST00000152648 895 ntTSL 1 (best) BASIC11.18□□□□□ -0.62
Atf6F6VAN0 Gm16165-201ENSMUST00000160140 795 ntBASIC11.18□□□□□ -0.62
Atf6F6VAN0 Gm9550-201ENSMUST00000161130 862 ntBASIC11.18□□□□□ -0.62
Atf6F6VAN0 Gm17168-201ENSMUST00000169146 345 ntTSL 5 BASIC11.18□□□□□ -0.62
Atf6F6VAN0 Gm38321-201ENSMUST00000195053 235 ntBASIC11.18□□□□□ -0.62
Atf6F6VAN0 Gm43380-201ENSMUST00000200421 220 ntBASIC11.18□□□□□ -0.62
Atf6F6VAN0 Gm43947-201ENSMUST00000203019 959 ntBASIC11.18□□□□□ -0.62
Atf6F6VAN0 Gm44698-201ENSMUST00000207382 384 ntTSL 5 BASIC11.18□□□□□ -0.62
Atf6F6VAN0 Sdf2-201ENSMUST00000002133 1268 ntAPPRIS P1 TSL 1 (best) BASIC11.18□□□□□ -0.62
Atf6F6VAN0 Il18-203ENSMUST00000213916 885 ntTSL 1 (best) BASIC11.18□□□□□ -0.62
Atf6F6VAN0 AC154680.1-201ENSMUST00000224376 859 ntBASIC11.18□□□□□ -0.62
Atf6F6VAN0 Tnfsf9-201ENSMUST00000039490 1230 ntAPPRIS P1 TSL 1 (best) BASIC11.18□□□□□ -0.62
Atf6F6VAN0 Col9a1-201ENSMUST00000054588 3834 ntAPPRIS P1 TSL 1 (best) BASIC11.18□□□□□ -0.62
Atf6F6VAN0 Olfr1212-201ENSMUST00000055895 936 ntAPPRIS P1 BASIC11.18□□□□□ -0.62
Atf6F6VAN0 Wfdc6a-201ENSMUST00000099096 805 ntAPPRIS P1 TSL 1 (best) BASIC11.18□□□□□ -0.62
Atf6F6VAN0 Asap1-202ENSMUST00000110114 4409 ntAPPRIS ALT2 TSL 5 BASIC11.18□□□□□ -0.62
Atf6F6VAN0 Eya1-209ENSMUST00000190337 2199 ntAPPRIS P1 TSL 1 (best) BASIC11.18□□□□□ -0.62
Atf6F6VAN0 Gfm2-202ENSMUST00000042084 3074 ntTSL 1 (best) BASIC11.18□□□□□ -0.62
Atf6F6VAN0 Tsc22d4-202ENSMUST00000100539 3983 ntAPPRIS P2 TSL 1 (best) BASIC11.18□□□□□ -0.62
Atf6F6VAN0 Wipf2-201ENSMUST00000037480 7011 ntAPPRIS P1 TSL 1 (best) BASIC11.18□□□□□ -0.62
Atf6F6VAN0 C2cd5-201ENSMUST00000087485 4265 ntTSL 5 BASIC11.18□□□□□ -0.62
Atf6F6VAN0 Il27ra-201ENSMUST00000005601 2664 ntAPPRIS P1 TSL 1 (best) BASIC11.18□□□□□ -0.62
Atf6F6VAN0 Rab3gap2-201ENSMUST00000069652 7052 ntAPPRIS P2 TSL 5 BASIC11.18□□□□□ -0.62
Atf6F6VAN0 Elmo2-201ENSMUST00000071699 3247 ntAPPRIS ALT2 TSL 1 (best) BASIC11.18□□□□□ -0.62
Atf6F6VAN0 Arhgap33os-201ENSMUST00000124276 2648 ntTSL 2 BASIC11.18□□□□□ -0.62
Atf6F6VAN0 Smg6-201ENSMUST00000045281 5848 ntAPPRIS P1 TSL 1 (best) BASIC11.18□□□□□ -0.62
Atf6F6VAN0 Nr1h4-203ENSMUST00000105297 2013 ntTSL 1 (best) BASIC11.18□□□□□ -0.62
Atf6F6VAN0 Ces5a-203ENSMUST00000212009 2042 ntAPPRIS P1 TSL 1 (best) BASIC11.18□□□□□ -0.62
Atf6F6VAN0 Pnkd-202ENSMUST00000087225 2859 ntTSL 1 (best) BASIC11.18□□□□□ -0.62
Atf6F6VAN0 Tns1-209ENSMUST00000187691 2813 ntTSL 1 (best) BASIC11.17□□□□□ -0.62
Atf6F6VAN0 Avpr2-202ENSMUST00000101470 2787 ntTSL 1 (best) BASIC11.17□□□□□ -0.62
Atf6F6VAN0 Calhm2-201ENSMUST00000035822 2458 ntAPPRIS P1 TSL 1 (best) BASIC11.17□□□□□ -0.62
Atf6F6VAN0 Npy1r-201ENSMUST00000039303 3001 ntAPPRIS P1 TSL 1 (best) BASIC11.17□□□□□ -0.62
Atf6F6VAN0 C2-206ENSMUST00000152417 2157 ntTSL 5 BASIC11.17□□□□□ -0.62
Atf6F6VAN0 Ptpn4-201ENSMUST00000064091 10874 ntAPPRIS P1 TSL 5 BASIC11.17□□□□□ -0.62
Atf6F6VAN0 Palm2-201ENSMUST00000102904 2958 ntAPPRIS P1 TSL 1 (best) BASIC11.17□□□□□ -0.62
Atf6F6VAN0 Pax5-205ENSMUST00000107827 1315 ntTSL 5 BASIC11.17□□□□□ -0.62
Atf6F6VAN0 Plekhn1-204ENSMUST00000218699 3196 ntTSL 2 BASIC11.17□□□□□ -0.62
Atf6F6VAN0 Fam184b-201ENSMUST00000016023 4236 ntAPPRIS P1 TSL 1 (best) BASIC11.17□□□□□ -0.62
Atf6F6VAN0 Lactb2-201ENSMUST00000027071 4494 ntAPPRIS P1 TSL 1 (best) BASIC11.17□□□□□ -0.62
Atf6F6VAN0 Olfr239-202ENSMUST00000213731 3690 ntTSL 5 BASIC11.17□□□□□ -0.62
Atf6F6VAN0 Ak8-201ENSMUST00000074156 1567 ntAPPRIS P1 TSL 1 (best) BASIC11.17□□□□□ -0.62
Atf6F6VAN0 Anp32e-204ENSMUST00000168106 2890 ntTSL 5 BASIC11.17□□□□□ -0.62
Atf6F6VAN0 Rpl23-201ENSMUST00000103146 1059 ntAPPRIS P1 TSL 1 (best) BASIC11.17□□□□□ -0.62
Atf6F6VAN0 Fam129a-203ENSMUST00000111875 1296 ntAPPRIS ALT2 TSL 1 (best) BASIC11.17□□□□□ -0.62
Atf6F6VAN0 Il1rn-202ENSMUST00000114485 728 ntTSL 1 (best) BASIC11.17□□□□□ -0.62
Atf6F6VAN0 D3Ertd751e-204ENSMUST00000119572 1011 ntAPPRIS ALT2 TSL 1 (best) BASIC11.17□□□□□ -0.62
Atf6F6VAN0 Gm12136-201ENSMUST00000120460 1209 ntBASIC11.17□□□□□ -0.62
Atf6F6VAN0 Gm12570-201ENSMUST00000122047 1030 ntBASIC11.17□□□□□ -0.62
Atf6F6VAN0 Gm15856-201ENSMUST00000124853 1162 ntTSL 1 (best) BASIC11.17□□□□□ -0.62
Atf6F6VAN0 9030204H09Rik-201ENSMUST00000139455 653 ntTSL 1 (best) BASIC11.17□□□□□ -0.62
Atf6F6VAN0 Tbata-210ENSMUST00000151886 915 ntTSL 1 (best) BASIC11.17□□□□□ -0.62
Atf6F6VAN0 Scgb1b19-201ENSMUST00000165813 418 ntAPPRIS P1 TSL 5 BASIC11.17□□□□□ -0.62
Atf6F6VAN0 Slc2a4rg-ps-202ENSMUST00000176590 1143 ntBASIC11.17□□□□□ -0.62
Atf6F6VAN0 Scgb1b3-201ENSMUST00000179481 419 ntAPPRIS P1 TSL 1 (best) BASIC11.17□□□□□ -0.62
Atf6F6VAN0 Ly6c1-202ENSMUST00000179762 838 ntAPPRIS P3 TSL 1 (best) BASIC11.17□□□□□ -0.62
Atf6F6VAN0 Gm42657-201ENSMUST00000201746 211 ntBASIC11.17□□□□□ -0.62
Atf6F6VAN0 Gadd45a-206ENSMUST00000204282 460 ntTSL 5 BASIC11.17□□□□□ -0.62
Atf6F6VAN0 Fam168a-204ENSMUST00000207564 1083 ntTSL 5 BASIC11.17□□□□□ -0.62
Atf6F6VAN0 AC122346.3-201ENSMUST00000223983 306 ntBASIC11.17□□□□□ -0.62
Atf6F6VAN0 AC135469.1-201ENSMUST00000225984 772 ntBASIC11.17□□□□□ -0.62
Atf6F6VAN0 Gm14267-206ENSMUST00000226870 1209 ntBASIC11.17□□□□□ -0.62
Atf6F6VAN0 AC140209.1-201ENSMUST00000227875 284 ntBASIC11.17□□□□□ -0.62
Atf6F6VAN0 Aldoa-202ENSMUST00000087566 1549 ntTSL 5 BASIC11.17□□□□□ -0.62
Atf6F6VAN0 Kdelc1-201ENSMUST00000027213 1765 ntTSL 1 (best) BASIC11.17□□□□□ -0.62
Atf6F6VAN0 Eif4g2-206ENSMUST00000161051 3548 ntTSL 1 (best) BASIC11.17□□□□□ -0.62
Atf6F6VAN0 Ifit1bl1-202ENSMUST00000168254 2215 ntAPPRIS ALT2 TSL 2 BASIC11.17□□□□□ -0.62
Atf6F6VAN0 Snw1-201ENSMUST00000021428 2232 ntAPPRIS P1 TSL 1 (best) BASIC11.17□□□□□ -0.62
Atf6F6VAN0 Rbbp5-202ENSMUST00000187505 1977 ntTSL 5 BASIC11.17□□□□□ -0.62
Retrieved 100 of 76,532 protein–RNA pairs in 64.6 ms