Protein–RNA interactions for Protein: Q62059

Vcan, Versican core protein, mousemouse

Predictions only

Length 3,357 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VcanQ62059 Gm11307-201ENSMUST00000121088 929 ntBASIC9.89□□□□□ -0.83
VcanQ62059 Gm12688-201ENSMUST00000136525 701 ntTSL 1 (best) BASIC9.89□□□□□ -0.83
VcanQ62059 Gm16574-201ENSMUST00000159301 745 ntBASIC9.89□□□□□ -0.83
VcanQ62059 Mir6940-201ENSMUST00000183447 70 ntBASIC9.89□□□□□ -0.83
VcanQ62059 Gm37643-201ENSMUST00000195369 1260 ntBASIC9.89□□□□□ -0.83
VcanQ62059 Gm29803-201ENSMUST00000205069 375 ntBASIC9.89□□□□□ -0.83
VcanQ62059 Colca2-202ENSMUST00000215038 1269 ntAPPRIS P1 TSL 5 BASIC9.89□□□□□ -0.83
VcanQ62059 CT025642.1-201ENSMUST00000224734 1219 ntBASIC9.89□□□□□ -0.83
VcanQ62059 Tspan14-202ENSMUST00000224209 2477 ntAPPRIS P1 BASIC9.89□□□□□ -0.83
VcanQ62059 Kcna10-201ENSMUST00000055064 1913 ntAPPRIS P1 TSL 1 (best) BASIC9.89□□□□□ -0.83
VcanQ62059 Klhl7-201ENSMUST00000030841 2966 ntAPPRIS P1 TSL 1 (best) BASIC9.89□□□□□ -0.83
VcanQ62059 D030045P18Rik-204ENSMUST00000215085 2186 ntTSL 5 BASIC9.89□□□□□ -0.83
VcanQ62059 Pdgfd-202ENSMUST00000168039 1795 ntAPPRIS P2 TSL 1 (best) BASIC9.89□□□□□ -0.83
VcanQ62059 9630002D21Rik-201ENSMUST00000221128 1351 ntTSL 5 BASIC9.89□□□□□ -0.83
VcanQ62059 BC035947-201ENSMUST00000170511 3063 ntAPPRIS P1 TSL 1 (best) BASIC9.89□□□□□ -0.83
VcanQ62059 Rsph14-203ENSMUST00000159994 1728 ntTSL 5 BASIC9.88□□□□□ -0.83
VcanQ62059 6030407O03Rik-201ENSMUST00000189514 2094 ntTSL 1 (best) BASIC9.88□□□□□ -0.83
VcanQ62059 Eda-209ENSMUST00000113783 4930 ntTSL 5 BASIC9.88□□□□□ -0.83
VcanQ62059 Sgk3-204ENSMUST00000171265 3680 ntAPPRIS P1 TSL 1 (best) BASIC9.88□□□□□ -0.83
VcanQ62059 Gm45675-201ENSMUST00000211202 3429 ntBASIC9.88□□□□□ -0.83
VcanQ62059 Npy1r-201ENSMUST00000039303 3001 ntAPPRIS P1 TSL 1 (best) BASIC9.88□□□□□ -0.83
VcanQ62059 Srpk1-204ENSMUST00000130643 4465 ntAPPRIS P1 TSL 1 (best) BASIC9.88□□□□□ -0.83
VcanQ62059 Cd1d2-203ENSMUST00000194208 1527 ntAPPRIS P5 TSL 1 (best) BASIC9.88□□□□□ -0.83
VcanQ62059 Gm24981-201ENSMUST00000104459 132 ntBASIC9.88□□□□□ -0.83
VcanQ62059 Tpm1-205ENSMUST00000113685 1208 ntAPPRIS P2 TSL 1 (best) BASIC9.88□□□□□ -0.83
VcanQ62059 Pex13-ps-201ENSMUST00000118184 1157 ntBASIC9.88□□□□□ -0.83
VcanQ62059 Gm12326-201ENSMUST00000132986 618 ntTSL 5 BASIC9.88□□□□□ -0.83
VcanQ62059 6430503K07Rik-201ENSMUST00000144411 476 ntTSL 2 BASIC9.88□□□□□ -0.83
VcanQ62059 Gm16118-201ENSMUST00000161914 680 ntTSL 2 BASIC9.88□□□□□ -0.83
VcanQ62059 Lrmda-206ENSMUST00000162540 742 ntAPPRIS ALT2 TSL 1 (best) BASIC9.88□□□□□ -0.83
VcanQ62059 Plut-201ENSMUST00000172461 855 ntTSL 1 (best) BASIC9.88□□□□□ -0.83
VcanQ62059 Gm25687-201ENSMUST00000175442 241 ntBASIC9.88□□□□□ -0.83
VcanQ62059 Gm29157-201ENSMUST00000188753 612 ntBASIC9.88□□□□□ -0.83
VcanQ62059 Ngf-204ENSMUST00000198644 1120 ntTSL 5 BASIC9.88□□□□□ -0.83
VcanQ62059 Abracl-201ENSMUST00000020002 846 ntAPPRIS P1 TSL 1 (best) BASIC9.88□□□□□ -0.83
VcanQ62059 Gm42067-202ENSMUST00000210917 410 ntTSL 2 BASIC9.88□□□□□ -0.83
VcanQ62059 Figla-201ENSMUST00000032070 759 ntAPPRIS P1 TSL 1 (best) BASIC9.88□□□□□ -0.83
VcanQ62059 Elmod3-201ENSMUST00000070990 2122 ntAPPRIS P2 TSL 1 (best) BASIC9.88□□□□□ -0.83
VcanQ62059 Ucp1-201ENSMUST00000034146 1636 ntAPPRIS P1 TSL 1 (best) BASIC9.88□□□□□ -0.83
VcanQ62059 Magea8-201ENSMUST00000070141 1646 ntAPPRIS P1 TSL 1 (best) BASIC9.88□□□□□ -0.83
VcanQ62059 Foxred1-201ENSMUST00000043805 2232 ntAPPRIS P3 TSL 1 (best) BASIC9.88□□□□□ -0.83
VcanQ62059 Hnrnpc-201ENSMUST00000111610 2847 ntTSL 1 (best) BASIC9.88□□□□□ -0.83
VcanQ62059 Hnrnpc-202ENSMUST00000164655 2843 ntTSL 5 BASIC9.88□□□□□ -0.83
VcanQ62059 Hgs-202ENSMUST00000106203 2901 ntAPPRIS ALT2 TSL 5 BASIC9.88□□□□□ -0.83
VcanQ62059 Tfr2-207ENSMUST00000198866 3072 ntAPPRIS P1 TSL 1 (best) BASIC9.88□□□□□ -0.83
VcanQ62059 Dvl2-207ENSMUST00000190940 5037 ntAPPRIS P1 TSL 1 (best) BASIC9.88□□□□□ -0.83
VcanQ62059 Slc17a5-202ENSMUST00000117645 3114 ntTSL 1 (best) BASIC9.88□□□□□ -0.83
VcanQ62059 Gm32540-201ENSMUST00000207174 1872 ntTSL 5 BASIC9.88□□□□□ -0.83
VcanQ62059 Tsc22d2-203ENSMUST00000199164 4659 ntAPPRIS ALT2 TSL 1 (best) BASIC9.88□□□□□ -0.83
VcanQ62059 1700021N21Rik-201ENSMUST00000131110 904 ntTSL 1 (best) BASIC9.88□□□□□ -0.83
VcanQ62059 Gm5459-201ENSMUST00000171235 798 ntBASIC9.88□□□□□ -0.83
VcanQ62059 Gm37885-202ENSMUST00000195868 685 ntTSL 3 BASIC9.88□□□□□ -0.83
VcanQ62059 AC130219.2-201ENSMUST00000228765 807 ntBASIC9.88□□□□□ -0.83
VcanQ62059 Calm4-201ENSMUST00000042219 917 ntAPPRIS P1 BASIC9.88□□□□□ -0.83
VcanQ62059 4933427I22Rik-202ENSMUST00000153921 1378 ntTSL 1 (best) BASIC9.88□□□□□ -0.83
VcanQ62059 Mterf1b-201ENSMUST00000177258 1368 ntAPPRIS P1 TSL 1 (best) BASIC9.88□□□□□ -0.83
VcanQ62059 Pax5-202ENSMUST00000102932 1460 ntTSL 5 BASIC9.88□□□□□ -0.83
VcanQ62059 Cd47-201ENSMUST00000084838 5277 ntAPPRIS P1 TSL 1 (best) BASIC9.88□□□□□ -0.83
VcanQ62059 Vezt-202ENSMUST00000118077 2223 ntAPPRIS ALT2 TSL 1 (best) BASIC9.88□□□□□ -0.83
VcanQ62059 Ephx3-201ENSMUST00000087721 2416 ntAPPRIS P3 TSL 1 (best) BASIC9.88□□□□□ -0.83
VcanQ62059 Rps6ka6-203ENSMUST00000096348 4151 ntAPPRIS ALT2 TSL 2 BASIC9.88□□□□□ -0.83
VcanQ62059 Cfap74-204ENSMUST00000123952 2365 ntAPPRIS P2 TSL 1 (best) BASIC9.88□□□□□ -0.83
VcanQ62059 Ndufa9-203ENSMUST00000205002 1445 ntAPPRIS P2 TSL 1 (best) BASIC9.88□□□□□ -0.83
VcanQ62059 Camk1g-201ENSMUST00000016323 2469 ntAPPRIS P1 TSL 1 (best) BASIC9.88□□□□□ -0.83
VcanQ62059 Clip1-202ENSMUST00000063905 4589 ntAPPRIS ALT2 TSL 5 BASIC9.88□□□□□ -0.83
VcanQ62059 Asap2-204ENSMUST00000101562 5552 ntAPPRIS ALT2 TSL 1 (best) BASIC9.88□□□□□ -0.83
VcanQ62059 Usp30-201ENSMUST00000031588 4604 ntAPPRIS P1 TSL 1 (best) BASIC9.88□□□□□ -0.83
VcanQ62059 Stmn1-202ENSMUST00000105867 802 ntTSL 5 BASIC9.88□□□□□ -0.83
VcanQ62059 4930449I24Rik-201ENSMUST00000110598 1168 ntAPPRIS P1 TSL 1 (best) BASIC9.88□□□□□ -0.83
VcanQ62059 Gm16058-201ENSMUST00000124392 427 ntTSL 2 BASIC9.88□□□□□ -0.83
VcanQ62059 Has2os-202ENSMUST00000163314 633 ntTSL 3 BASIC9.88□□□□□ -0.83
VcanQ62059 Sbsn-205ENSMUST00000182721 677 ntAPPRIS ALT2 TSL 3 BASIC9.88□□□□□ -0.83
VcanQ62059 Gm2316-201ENSMUST00000190613 921 ntBASIC9.88□□□□□ -0.83
VcanQ62059 Trav4-1-201ENSMUST00000199078 330 ntBASIC9.88□□□□□ -0.83
VcanQ62059 Gm42867-201ENSMUST00000202995 469 ntBASIC9.88□□□□□ -0.83
VcanQ62059 4930486N12Rik-201ENSMUST00000206668 632 ntBASIC9.88□□□□□ -0.83
VcanQ62059 Lysmd4-203ENSMUST00000207757 631 ntAPPRIS ALT2 TSL 3 BASIC9.88□□□□□ -0.83
VcanQ62059 Gm44753-202ENSMUST00000208297 562 ntTSL 5 BASIC9.88□□□□□ -0.83
VcanQ62059 Tatdn3-202ENSMUST00000085633 1089 ntTSL 1 (best) BASIC9.88□□□□□ -0.83
VcanQ62059 Inppl1-202ENSMUST00000165052 4730 ntAPPRIS P1 TSL 1 (best) BASIC9.87□□□□□ -0.83
VcanQ62059 Ifnlr1-201ENSMUST00000074408 4182 ntAPPRIS P1 TSL 1 (best) BASIC9.87□□□□□ -0.83
VcanQ62059 Myo1c-201ENSMUST00000069057 4547 ntTSL 1 (best) BASIC9.87□□□□□ -0.83
VcanQ62059 AC154528.2-201ENSMUST00000228432 3023 ntBASIC9.87□□□□□ -0.83
VcanQ62059 Pmaip1-201ENSMUST00000025399 2646 ntAPPRIS P1 TSL 1 (best) BASIC9.87□□□□□ -0.83
VcanQ62059 Gm15083-201ENSMUST00000138670 1413 ntTSL 1 (best) BASIC9.87□□□□□ -0.83
VcanQ62059 Zbtb7a-201ENSMUST00000048128 5938 ntAPPRIS P1 TSL 1 (best) BASIC9.87□□□□□ -0.83
VcanQ62059 Carmil3-201ENSMUST00000076236 4602 ntAPPRIS P1 TSL 2 BASIC9.87□□□□□ -0.83
VcanQ62059 Srsf6-203ENSMUST00000130411 3527 ntAPPRIS P1 TSL 1 (best) BASIC9.87□□□□□ -0.83
VcanQ62059 Spata33-208ENSMUST00000212892 2940 ntTSL 1 (best) BASIC9.87□□□□□ -0.83
VcanQ62059 Cyp2d9-201ENSMUST00000089129 1651 ntAPPRIS P1 TSL 1 (best) BASIC9.87□□□□□ -0.83
VcanQ62059 Wipf1-203ENSMUST00000102680 4032 ntAPPRIS P1 TSL 1 (best) BASIC9.87□□□□□ -0.83
VcanQ62059 Maats1os-201ENSMUST00000133496 326 ntTSL 3 BASIC9.87□□□□□ -0.83
VcanQ62059 Gm19566-201ENSMUST00000199576 610 ntBASIC9.87□□□□□ -0.83
VcanQ62059 Itgax-203ENSMUST00000205460 1215 ntTSL 1 (best) BASIC9.87□□□□□ -0.83
VcanQ62059 Gm30808-201ENSMUST00000211166 845 ntTSL 5 BASIC9.87□□□□□ -0.83
VcanQ62059 AC153379.1-201ENSMUST00000218174 485 ntTSL 3 BASIC9.87□□□□□ -0.83
VcanQ62059 BX649293.1-201ENSMUST00000227437 631 ntBASIC9.87□□□□□ -0.83
VcanQ62059 Hesx1-201ENSMUST00000035433 1141 ntAPPRIS P1 TSL 1 (best) BASIC9.87□□□□□ -0.83
VcanQ62059 Mblac2-201ENSMUST00000057598 3957 ntAPPRIS P1 TSL 1 (best) BASIC9.87□□□□□ -0.83
VcanQ62059 Gm20498-203ENSMUST00000166664 2284 ntAPPRIS P1 TSL 2 BASIC9.87□□□□□ -0.83
Retrieved 100 of 76,532 protein–RNA pairs in 56.4 ms