Protein–RNA interactions for Protein: P50405

Sftpb, Pulmonary surfactant-associated protein B, mousemouse

Predictions only

Length 377 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SftpbP50405 Csmd2os-202ENSMUST00000179945 643 ntTSL 1 (best) BASIC11.09□□□□□ -0.63
SftpbP50405 1700029J03Rik-201ENSMUST00000185803 789 ntTSL 1 (best) BASIC11.09□□□□□ -0.63
SftpbP50405 Gm7255-201ENSMUST00000187371 908 ntBASIC11.09□□□□□ -0.63
SftpbP50405 Gm42859-201ENSMUST00000199572 193 ntBASIC11.09□□□□□ -0.63
SftpbP50405 Polr1d-204ENSMUST00000200993 1167 ntTSL 5 BASIC11.09□□□□□ -0.63
SftpbP50405 Cotl1-203ENSMUST00000211873 826 ntTSL 5 BASIC11.09□□□□□ -0.63
SftpbP50405 Gm5363-201ENSMUST00000211927 938 ntBASIC11.09□□□□□ -0.63
SftpbP50405 Gm34868-201ENSMUST00000218341 530 ntTSL 3 BASIC11.09□□□□□ -0.63
SftpbP50405 Gm36176-201ENSMUST00000218749 501 ntAPPRIS P1 BASIC11.09□□□□□ -0.63
SftpbP50405 Gm9257-201ENSMUST00000221254 232 ntBASIC11.09□□□□□ -0.63
SftpbP50405 Gm32939-201ENSMUST00000222336 843 ntTSL 3 BASIC11.09□□□□□ -0.63
SftpbP50405 Gm21142-201ENSMUST00000179999 2604 ntBASIC11.09□□□□□ -0.63
SftpbP50405 Icam1-201ENSMUST00000086399 2535 ntAPPRIS P1 TSL 1 (best) BASIC11.09□□□□□ -0.63
SftpbP50405 Gm43274-201ENSMUST00000202545 5000 ntBASIC11.09□□□□□ -0.63
SftpbP50405 Plekha7-207ENSMUST00000182511 4502 ntTSL 2 BASIC11.09□□□□□ -0.63
SftpbP50405 Alas1-202ENSMUST00000112524 3089 ntAPPRIS P2 TSL 1 (best) BASIC11.09□□□□□ -0.63
SftpbP50405 Pou2f1-204ENSMUST00000111426 2671 ntAPPRIS ALT2 TSL 5 BASIC11.09□□□□□ -0.63
SftpbP50405 Sgk1-203ENSMUST00000100036 2476 ntTSL 5 BASIC11.09□□□□□ -0.63
SftpbP50405 Gm42851-201ENSMUST00000201325 1411 ntBASIC11.09□□□□□ -0.63
SftpbP50405 Zbtb21-202ENSMUST00000063605 5867 ntAPPRIS ALT2 TSL 1 (best) BASIC11.09□□□□□ -0.63
SftpbP50405 Vwa5b1-201ENSMUST00000030533 7486 ntAPPRIS P1 TSL 1 (best) BASIC11.09□□□□□ -0.63
SftpbP50405 Npy1r-201ENSMUST00000039303 3001 ntAPPRIS P1 TSL 1 (best) BASIC11.09□□□□□ -0.63
SftpbP50405 Dhtkd1-201ENSMUST00000026924 3852 ntAPPRIS P1 TSL 1 (best) BASIC11.09□□□□□ -0.63
SftpbP50405 Cdk5rap1-201ENSMUST00000028990 1970 ntAPPRIS P1 TSL 1 (best) BASIC11.08□□□□□ -0.64
SftpbP50405 Scamp1-203ENSMUST00000152555 1877 ntTSL 1 (best) BASIC11.08□□□□□ -0.64
SftpbP50405 Tom1l2-204ENSMUST00000095254 4940 ntTSL 1 (best) BASIC11.08□□□□□ -0.64
SftpbP50405 Tmem108-203ENSMUST00000189066 2145 ntAPPRIS P1 TSL 1 (best) BASIC11.08□□□□□ -0.64
SftpbP50405 Gsg1-203ENSMUST00000111910 1384 ntAPPRIS ALT2 TSL 5 BASIC11.08□□□□□ -0.64
SftpbP50405 Arhgap45-202ENSMUST00000099501 3948 ntAPPRIS ALT2 TSL 1 (best) BASIC11.08□□□□□ -0.64
SftpbP50405 Ptk2b-203ENSMUST00000111121 3365 ntTSL 1 (best) BASIC11.08□□□□□ -0.64
SftpbP50405 Adcy7-202ENSMUST00000168545 5937 ntAPPRIS P1 TSL 1 (best) BASIC11.08□□□□□ -0.64
SftpbP50405 Ostm1-202ENSMUST00000105497 770 ntTSL 2 BASIC11.08□□□□□ -0.64
SftpbP50405 Gm17151-201ENSMUST00000105760 367 ntTSL 3 BASIC11.08□□□□□ -0.64
SftpbP50405 Eapp-202ENSMUST00000110713 886 ntTSL 1 (best) BASIC11.08□□□□□ -0.64
SftpbP50405 Gltp-202ENSMUST00000112212 799 ntTSL 5 BASIC11.08□□□□□ -0.64
SftpbP50405 Hint1-202ENSMUST00000117710 580 ntTSL 2 BASIC11.08□□□□□ -0.64
SftpbP50405 Mup-ps26-201ENSMUST00000121751 202 ntBASIC11.08□□□□□ -0.64
SftpbP50405 Mcpt8-201ENSMUST00000015594 836 ntAPPRIS P1 TSL 1 (best) BASIC11.08□□□□□ -0.64
SftpbP50405 Mrgpra2a-201ENSMUST00000159004 1240 ntAPPRIS P1 TSL 1 (best) BASIC11.08□□□□□ -0.64
SftpbP50405 Cryge-202ENSMUST00000161960 690 ntTSL 1 (best) BASIC11.08□□□□□ -0.64
SftpbP50405 Snord55-201ENSMUST00000174939 79 ntBASIC11.08□□□□□ -0.64
SftpbP50405 Gm23045-201ENSMUST00000175041 96 ntBASIC11.08□□□□□ -0.64
SftpbP50405 Gm20662-201ENSMUST00000176356 601 ntAPPRIS P5 TSL 3 BASIC11.08□□□□□ -0.64
SftpbP50405 Gm7985-201ENSMUST00000183329 981 ntBASIC11.08□□□□□ -0.64
SftpbP50405 Gm29087-201ENSMUST00000186462 645 ntTSL 5 BASIC11.08□□□□□ -0.64
SftpbP50405 Creb1-209ENSMUST00000190348 1260 ntTSL 1 (best) BASIC11.08□□□□□ -0.64
SftpbP50405 5730585A16Rik-201ENSMUST00000193457 1027 ntBASIC11.08□□□□□ -0.64
SftpbP50405 Gm43458-201ENSMUST00000200791 462 ntTSL 3 BASIC11.08□□□□□ -0.64
SftpbP50405 4930430O22Rik-202ENSMUST00000202548 579 ntBASIC11.08□□□□□ -0.64
SftpbP50405 Pdzd9-203ENSMUST00000208635 1238 ntTSL 1 (best) BASIC11.08□□□□□ -0.64
SftpbP50405 Spata33-205ENSMUST00000212523 486 ntTSL 3 BASIC11.08□□□□□ -0.64
SftpbP50405 9430078K24Rik-201ENSMUST00000218818 1082 ntTSL 1 (best) BASIC11.08□□□□□ -0.64
SftpbP50405 Cct2-206ENSMUST00000219573 637 ntTSL 3 BASIC11.08□□□□□ -0.64
SftpbP50405 Snx24-201ENSMUST00000025417 994 ntAPPRIS P1 TSL 1 (best) BASIC11.08□□□□□ -0.64
SftpbP50405 Mrpl18-201ENSMUST00000079121 1219 ntAPPRIS P1 TSL 1 (best) BASIC11.08□□□□□ -0.64
SftpbP50405 Olfr959-201ENSMUST00000079178 1055 ntAPPRIS P1 BASIC11.08□□□□□ -0.64
SftpbP50405 Iqcf1-201ENSMUST00000085114 613 ntAPPRIS P4 TSL 1 (best) BASIC11.08□□□□□ -0.64
SftpbP50405 Taar7d-201ENSMUST00000092657 1077 ntAPPRIS P1 BASIC11.08□□□□□ -0.64
SftpbP50405 Gm10775-201ENSMUST00000099425 1203 ntAPPRIS P1 TSL 1 (best) BASIC11.08□□□□□ -0.64
SftpbP50405 A830010M20Rik-208ENSMUST00000211896 5256 ntAPPRIS P1 TSL 5 BASIC11.08□□□□□ -0.64
SftpbP50405 Pex26-202ENSMUST00000118234 3778 ntTSL 1 (best) BASIC11.08□□□□□ -0.64
SftpbP50405 AC140462.2-201ENSMUST00000225718 2433 ntBASIC11.08□□□□□ -0.64
SftpbP50405 Limch1-201ENSMUST00000038188 5903 ntTSL 1 (best) BASIC11.08□□□□□ -0.64
SftpbP50405 Slc7a1-201ENSMUST00000048116 7179 ntAPPRIS P1 TSL 1 (best) BASIC11.08□□□□□ -0.64
SftpbP50405 Ntrk3-205ENSMUST00000193002 2678 ntAPPRIS ALT2 TSL 5 BASIC11.08□□□□□ -0.64
SftpbP50405 Prph2-201ENSMUST00000024773 2665 ntAPPRIS P1 TSL 1 (best) BASIC11.08□□□□□ -0.64
SftpbP50405 Tmem181b-ps-201ENSMUST00000167717 1413 ntBASIC11.08□□□□□ -0.64
SftpbP50405 Smco1-201ENSMUST00000093183 1408 ntAPPRIS P1 TSL 5 BASIC11.08□□□□□ -0.64
SftpbP50405 Arhgap36-202ENSMUST00000114904 3033 ntAPPRIS P2 TSL 1 (best) BASIC11.08□□□□□ -0.64
SftpbP50405 Traf3-201ENSMUST00000021706 7060 ntAPPRIS P1 TSL 1 (best) BASIC11.08□□□□□ -0.64
SftpbP50405 Gfra2-203ENSMUST00000227697 1323 ntBASIC11.08□□□□□ -0.64
SftpbP50405 Rnf133-201ENSMUST00000063548 1308 ntTSL 1 (best) BASIC11.08□□□□□ -0.64
SftpbP50405 Col11a1-201ENSMUST00000092155 7667 ntAPPRIS P1 TSL 1 (best) BASIC11.08□□□□□ -0.64
SftpbP50405 Clock-201ENSMUST00000075159 7478 ntAPPRIS P3 TSL 1 (best) BASIC11.07□□□□□ -0.64
SftpbP50405 Slc39a14-210ENSMUST00000152067 2075 ntAPPRIS ALT2 TSL 1 (best) BASIC11.07□□□□□ -0.64
SftpbP50405 Hmg20a-205ENSMUST00000215269 1700 ntAPPRIS P1 TSL 1 (best) BASIC11.07□□□□□ -0.64
SftpbP50405 Slc10a1-202ENSMUST00000218162 1749 ntAPPRIS P2 TSL 1 (best) BASIC11.07□□□□□ -0.64
SftpbP50405 4933439C10Rik-203ENSMUST00000132226 3184 ntTSL 1 (best) BASIC11.07□□□□□ -0.64
SftpbP50405 Rtn3-204ENSMUST00000088171 4973 ntTSL 1 (best) BASIC11.07□□□□□ -0.64
SftpbP50405 6430573F11Rik-203ENSMUST00000147525 5820 ntAPPRIS P1 TSL 1 (best) BASIC11.07□□□□□ -0.64
SftpbP50405 Tbc1d17-201ENSMUST00000047085 8750 ntAPPRIS P1 TSL 1 (best) BASIC11.07□□□□□ -0.64
SftpbP50405 Igkv3-10-201ENSMUST00000103397 356 ntAPPRIS ALT2 BASIC11.07□□□□□ -0.64
SftpbP50405 Ctrc-202ENSMUST00000105781 784 ntTSL 1 (best) BASIC11.07□□□□□ -0.64
SftpbP50405 Rpl35a-205ENSMUST00000115079 510 ntAPPRIS P1 TSL 2 BASIC11.07□□□□□ -0.64
SftpbP50405 Gm13045-201ENSMUST00000119019 712 ntBASIC11.07□□□□□ -0.64
SftpbP50405 Rpl28-ps1-201ENSMUST00000121497 414 ntBASIC11.07□□□□□ -0.64
SftpbP50405 Gm13442-201ENSMUST00000135749 663 ntTSL 3 BASIC11.07□□□□□ -0.64
SftpbP50405 Gm10051-201ENSMUST00000145209 414 ntBASIC11.07□□□□□ -0.64
SftpbP50405 AA387200-201ENSMUST00000147463 1177 ntTSL 3 BASIC11.07□□□□□ -0.64
SftpbP50405 Mir8115-201ENSMUST00000184992 119 ntBASIC11.07□□□□□ -0.64
SftpbP50405 Ly6e-203ENSMUST00000185861 838 ntAPPRIS P1 TSL 2 BASIC11.07□□□□□ -0.64
SftpbP50405 Ccdc12-201ENSMUST00000019803 834 ntAPPRIS P1 TSL 1 (best) BASIC11.07□□□□□ -0.64
SftpbP50405 Qdpr-209ENSMUST00000198258 1172 ntTSL 5 BASIC11.07□□□□□ -0.64
SftpbP50405 Gm19046-201ENSMUST00000221263 1298 ntBASIC11.07□□□□□ -0.64
SftpbP50405 AC154436.1-201ENSMUST00000227272 782 ntBASIC11.07□□□□□ -0.64
SftpbP50405 AC154589.2-201ENSMUST00000228847 251 ntBASIC11.07□□□□□ -0.64
SftpbP50405 1700001J03Rik-201ENSMUST00000073721 787 ntAPPRIS P1 TSL 1 (best) BASIC11.07□□□□□ -0.64
SftpbP50405 Tnni3-201ENSMUST00000098859 912 ntAPPRIS P1 TSL 1 (best) BASIC11.07□□□□□ -0.64
SftpbP50405 Nos1ap-203ENSMUST00000160466 1533 ntTSL 1 (best) BASIC11.07□□□□□ -0.64
SftpbP50405 Svil-204ENSMUST00000127297 6243 ntAPPRIS ALT2 TSL 5 BASIC11.07□□□□□ -0.64
Retrieved 100 of 76,532 protein–RNA pairs in 68.5 ms