Protein–RNA interactions for Protein: P09633

Hoxc9, Homeobox protein Hox-C9, mousemouse

Predictions only

Length 260 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Hoxc9P09633 Ppl-201ENSMUST00000035672 6277 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
Hoxc9P09633 Gm22751-201ENSMUST00000102077 109 ntBASIC14.04□□□□□ -0.16
Hoxc9P09633 Mir692-3-201ENSMUST00000102079 109 ntBASIC14.04□□□□□ -0.16
Hoxc9P09633 Mir692-2-201ENSMUST00000102081 109 ntBASIC14.04□□□□□ -0.16
Hoxc9P09633 Smim24-201ENSMUST00000105322 901 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
Hoxc9P09633 Klra9-202ENSMUST00000112032 1279 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
Hoxc9P09633 Gm14034-201ENSMUST00000120147 551 ntBASIC14.04□□□□□ -0.16
Hoxc9P09633 Gm12570-201ENSMUST00000122047 1030 ntBASIC14.04□□□□□ -0.16
Hoxc9P09633 Gm12207-201ENSMUST00000143016 494 ntTSL 2 BASIC14.04□□□□□ -0.16
Hoxc9P09633 Ube4bos3-201ENSMUST00000155845 756 ntTSL 1 (best) BASIC14.04□□□□□ -0.16
Hoxc9P09633 Rab11a-204ENSMUST00000167569 726 ntTSL 3 BASIC14.04□□□□□ -0.16
Hoxc9P09633 Gm3298-202ENSMUST00000172110 615 ntTSL 5 BASIC14.04□□□□□ -0.16
Hoxc9P09633 Tmem242-202ENSMUST00000185896 780 ntTSL 1 (best) BASIC14.04□□□□□ -0.16
Hoxc9P09633 Gm28746-201ENSMUST00000187453 380 ntBASIC14.04□□□□□ -0.16
Hoxc9P09633 Gm28893-201ENSMUST00000190951 1108 ntTSL 1 (best) BASIC14.04□□□□□ -0.16
Hoxc9P09633 Gm18182-201ENSMUST00000191380 1251 ntBASIC14.04□□□□□ -0.16
Hoxc9P09633 Gm43726-201ENSMUST00000199110 775 ntBASIC14.04□□□□□ -0.16
Hoxc9P09633 AC132384.2-201ENSMUST00000218018 526 ntBASIC14.04□□□□□ -0.16
Hoxc9P09633 Olfr1335-202ENSMUST00000219094 1148 ntAPPRIS P2 BASIC14.04□□□□□ -0.16
Hoxc9P09633 AC139155.1-201ENSMUST00000226043 444 ntBASIC14.04□□□□□ -0.16
Hoxc9P09633 Ssna1-201ENSMUST00000028342 862 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
Hoxc9P09633 Mt4-201ENSMUST00000034207 398 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
Hoxc9P09633 Klra9-201ENSMUST00000071554 1123 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
Hoxc9P09633 Olfr1335-201ENSMUST00000084313 1148 ntAPPRIS ALT2 BASIC14.04□□□□□ -0.16
Hoxc9P09633 Asgr1-202ENSMUST00000092959 1308 ntAPPRIS P3 TSL 2 BASIC14.04□□□□□ -0.16
Hoxc9P09633 Xpnpep1-209ENSMUST00000183108 4078 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
Hoxc9P09633 Pcdhgc4-201ENSMUST00000066140 5024 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
Hoxc9P09633 Oprm1-211ENSMUST00000105602 1366 ntTSL 1 (best) BASIC14.04□□□□□ -0.16
Hoxc9P09633 Pfn4-202ENSMUST00000178879 1396 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
Hoxc9P09633 Rnf180-205ENSMUST00000226044 3279 ntAPPRIS ALT2 BASIC14.04□□□□□ -0.16
Hoxc9P09633 Pde1b-205ENSMUST00000227955 3258 ntAPPRIS ALT1 BASIC14.04□□□□□ -0.16
Hoxc9P09633 Phc1-211ENSMUST00000161054 3612 ntAPPRIS ALT2 TSL 1 (best) BASIC14.04□□□□□ -0.16
Hoxc9P09633 Brap-202ENSMUST00000111765 3861 ntTSL 1 (best) BASIC14.04□□□□□ -0.16
Hoxc9P09633 Gm46355-201ENSMUST00000221434 1671 ntTSL 5 BASIC14.04□□□□□ -0.16
Hoxc9P09633 Dnajc16-201ENSMUST00000038014 5969 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
Hoxc9P09633 Itga2b-201ENSMUST00000103086 3437 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
Hoxc9P09633 Otud7b-201ENSMUST00000035519 8043 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
Hoxc9P09633 Tmem132a-201ENSMUST00000025645 3657 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
Hoxc9P09633 Gm26905-201ENSMUST00000180798 6621 ntTSL 5 BASIC14.03□□□□□ -0.16
Hoxc9P09633 Csf1-201ENSMUST00000014743 4176 ntAPPRIS P3 TSL 1 (best) BASIC14.03□□□□□ -0.16
Hoxc9P09633 Pou2f1-209ENSMUST00000160908 2591 ntAPPRIS ALT2 TSL 1 (best) BASIC14.03□□□□□ -0.16
Hoxc9P09633 Sox11-201ENSMUST00000079063 8311 ntAPPRIS P1 BASIC14.03□□□□□ -0.16
Hoxc9P09633 Rgr-203ENSMUST00000225070 4704 ntBASIC14.03□□□□□ -0.16
Hoxc9P09633 Brdt-201ENSMUST00000031215 4745 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
Hoxc9P09633 Pygo2-202ENSMUST00000107413 2911 ntTSL 1 (best) BASIC14.03□□□□□ -0.16
Hoxc9P09633 Poldip3-202ENSMUST00000100375 3157 ntTSL 1 (best) BASIC14.03□□□□□ -0.16
Hoxc9P09633 Ccdc42-202ENSMUST00000102612 785 ntTSL 1 (best) BASIC14.03□□□□□ -0.16
Hoxc9P09633 Wfdc3-202ENSMUST00000109328 726 ntTSL 1 (best) BASIC14.03□□□□□ -0.16
Hoxc9P09633 Gm14639-201ENSMUST00000120850 866 ntBASIC14.03□□□□□ -0.16
Hoxc9P09633 6430531B16Rik-202ENSMUST00000121412 1176 ntAPPRIS ALT2 TSL 1 (best) BASIC14.03□□□□□ -0.16
Hoxc9P09633 Gm11670-201ENSMUST00000143435 511 ntTSL 2 BASIC14.03□□□□□ -0.16
Hoxc9P09633 Pitpnm2os2-201ENSMUST00000159053 828 ntTSL 2 BASIC14.03□□□□□ -0.16
Hoxc9P09633 4930444A19Rik-202ENSMUST00000190007 633 ntTSL 1 (best) BASIC14.03□□□□□ -0.16
Hoxc9P09633 Gm44388-201ENSMUST00000204350 258 ntBASIC14.03□□□□□ -0.16
Hoxc9P09633 Gm44196-203ENSMUST00000204359 1190 ntTSL 1 (best) BASIC14.03□□□□□ -0.16
Hoxc9P09633 1700047G03Rik-205ENSMUST00000227822 1048 ntBASIC14.03□□□□□ -0.16
Hoxc9P09633 Gm9701-201ENSMUST00000077976 427 ntBASIC14.03□□□□□ -0.16
Hoxc9P09633 Hax1-201ENSMUST00000079724 1139 ntAPPRIS P3 TSL 1 (best) BASIC14.03□□□□□ -0.16
Hoxc9P09633 Ppp1r16b-201ENSMUST00000045503 6408 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
Hoxc9P09633 Gm7538-201ENSMUST00000200918 1348 ntTSL 1 (best) BASIC14.03□□□□□ -0.16
Hoxc9P09633 AC154640.1-203ENSMUST00000228316 1618 ntBASIC14.03□□□□□ -0.16
Hoxc9P09633 Gm9951-202ENSMUST00000149618 1772 ntTSL 2 BASIC14.03□□□□□ -0.16
Hoxc9P09633 Hormad2-202ENSMUST00000109948 1969 ntAPPRIS P1 TSL 5 BASIC14.03□□□□□ -0.16
Hoxc9P09633 Sparc-202ENSMUST00000108858 2115 ntAPPRIS ALT2 TSL 1 (best) BASIC14.03□□□□□ -0.16
Hoxc9P09633 Gm38569-201ENSMUST00000205476 2228 ntTSL 1 (best) BASIC14.03□□□□□ -0.16
Hoxc9P09633 Gm26637-201ENSMUST00000180880 2289 ntTSL 1 (best) BASIC14.03□□□□□ -0.16
Hoxc9P09633 Slc38a3-209ENSMUST00000193932 2463 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
Hoxc9P09633 Cyb5r3-202ENSMUST00000162178 2547 ntTSL 1 (best) BASIC14.03□□□□□ -0.16
Hoxc9P09633 Sun1-205ENSMUST00000110883 3714 ntAPPRIS ALT2 TSL 1 (best) BASIC14.03□□□□□ -0.16
Hoxc9P09633 Golga2-202ENSMUST00000100194 4373 ntAPPRIS P4 TSL 1 (best) BASIC14.03□□□□□ -0.16
Hoxc9P09633 Acvrl1-201ENSMUST00000000542 3640 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.16
Hoxc9P09633 Pcsk7-209ENSMUST00000216672 3599 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.16
Hoxc9P09633 Acsbg1-201ENSMUST00000034822 2880 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.16
Hoxc9P09633 Gm21939-201ENSMUST00000221137 2773 ntBASIC14.02□□□□□ -0.16
Hoxc9P09633 Col14a1-203ENSMUST00000110221 5679 ntAPPRIS P2 TSL 1 (best) BASIC14.02□□□□□ -0.16
Hoxc9P09633 Ccr6-202ENSMUST00000164411 1553 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.16
Hoxc9P09633 Neu2-206ENSMUST00000166259 1596 ntAPPRIS P3 TSL 1 (best) BASIC14.02□□□□□ -0.16
Hoxc9P09633 Clip1-202ENSMUST00000063905 4589 ntAPPRIS ALT2 TSL 5 BASIC14.02□□□□□ -0.16
Hoxc9P09633 1700022A22Rik-202ENSMUST00000187130 1458 ntTSL 5 BASIC14.02□□□□□ -0.16
Hoxc9P09633 Amd-ps3-201ENSMUST00000072796 1496 ntBASIC14.02□□□□□ -0.16
Hoxc9P09633 Fhl1-202ENSMUST00000114768 1337 ntTSL 5 BASIC14.02□□□□□ -0.17
Hoxc9P09633 Gm23132-201ENSMUST00000104254 132 ntBASIC14.02□□□□□ -0.17
Hoxc9P09633 Sfxn5-204ENSMUST00000113788 514 ntTSL 1 (best) BASIC14.02□□□□□ -0.17
Hoxc9P09633 Gm16228-201ENSMUST00000162286 809 ntBASIC14.02□□□□□ -0.17
Hoxc9P09633 Mok-204ENSMUST00000177224 551 ntTSL 1 (best) BASIC14.02□□□□□ -0.17
Hoxc9P09633 C430039J16Rik-201ENSMUST00000181148 658 ntTSL 1 (best) BASIC14.02□□□□□ -0.17
Hoxc9P09633 Gm18443-201ENSMUST00000185358 556 ntBASIC14.02□□□□□ -0.17
Hoxc9P09633 Gm8918-201ENSMUST00000190587 1087 ntBASIC14.02□□□□□ -0.17
Hoxc9P09633 Gm38233-201ENSMUST00000194259 807 ntBASIC14.02□□□□□ -0.17
Hoxc9P09633 Gm42493-201ENSMUST00000197559 1121 ntTSL 1 (best) BASIC14.02□□□□□ -0.17
Hoxc9P09633 Gm18862-201ENSMUST00000204643 933 ntBASIC14.02□□□□□ -0.17
Hoxc9P09633 AC163638.2-201ENSMUST00000224920 827 ntBASIC14.02□□□□□ -0.17
Hoxc9P09633 Ctif-201ENSMUST00000165559 6173 ntAPPRIS P1 TSL 5 BASIC14.02□□□□□ -0.17
Hoxc9P09633 Armcx3-203ENSMUST00000086884 3488 ntAPPRIS P1 TSL 5 BASIC14.02□□□□□ -0.17
Hoxc9P09633 D130017N08Rik-203ENSMUST00000196629 2265 ntBASIC14.02□□□□□ -0.17
Hoxc9P09633 Tpx2-201ENSMUST00000028969 3654 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.17
Hoxc9P09633 Nup205-204ENSMUST00000201374 6411 ntAPPRIS ALT2 TSL 1 (best) BASIC14.02□□□□□ -0.17
Hoxc9P09633 D130043K22Rik-201ENSMUST00000006893 4973 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.17
Hoxc9P09633 Gm28624-201ENSMUST00000186430 2131 ntBASIC14.02□□□□□ -0.17
Hoxc9P09633 Dhdds-209ENSMUST00000144668 3219 ntAPPRIS P2 TSL 1 (best) BASIC14.02□□□□□ -0.17
Retrieved 100 of 76,532 protein–RNA pairs in 37.4 ms