Protein–RNA interactions for Protein: P02831

Hoxa3, Homeobox protein Hox-A3, mousemouse

Predictions only

Length 443 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Hoxa3P02831 Fkbp15-203ENSMUST00000098033 2323 ntAPPRIS ALT2 TSL 1 (best) BASIC9.17□□□□□ -0.94
Hoxa3P02831 4933413J09Rik-202ENSMUST00000059648 3387 ntTSL 1 (best) BASIC9.17□□□□□ -0.94
Hoxa3P02831 Flad1-202ENSMUST00000107426 2238 ntAPPRIS P1 TSL 1 (best) BASIC9.17□□□□□ -0.94
Hoxa3P02831 Snw1-201ENSMUST00000021428 2232 ntAPPRIS P1 TSL 1 (best) BASIC9.17□□□□□ -0.94
Hoxa3P02831 Olfr601-203ENSMUST00000214110 2196 ntAPPRIS P1 TSL 5 BASIC9.17□□□□□ -0.94
Hoxa3P02831 Olfr601-204ENSMUST00000217416 2195 ntAPPRIS P1 TSL 5 BASIC9.17□□□□□ -0.94
Hoxa3P02831 Larp7-201ENSMUST00000029588 2121 ntAPPRIS P1 TSL 5 BASIC9.17□□□□□ -0.94
Hoxa3P02831 Ncapd3-205ENSMUST00000216677 5149 ntAPPRIS P2 TSL 1 (best) BASIC9.17□□□□□ -0.94
Hoxa3P02831 Oas1d-201ENSMUST00000044224 2021 ntAPPRIS P1 TSL 1 (best) BASIC9.17□□□□□ -0.94
Hoxa3P02831 Wdr75-201ENSMUST00000027139 2953 ntAPPRIS P1 TSL 1 (best) BASIC9.17□□□□□ -0.94
Hoxa3P02831 Ddx56-201ENSMUST00000004507 1956 ntAPPRIS P1 TSL 1 (best) BASIC9.17□□□□□ -0.94
Hoxa3P02831 Gm26846-201ENSMUST00000181865 4869 ntTSL 5 BASIC9.17□□□□□ -0.94
Hoxa3P02831 Cacna1c-226ENSMUST00000219833 7591 ntTSL 5 BASIC9.17□□□□□ -0.94
Hoxa3P02831 Pdha1-201ENSMUST00000033662 2848 ntAPPRIS P1 TSL 1 (best) BASIC9.17□□□□□ -0.94
Hoxa3P02831 Col6a4-201ENSMUST00000121963 7371 ntAPPRIS P1 TSL 5 BASIC9.17□□□□□ -0.94
Hoxa3P02831 Igtp-203ENSMUST00000168280 1832 ntTSL 1 (best) BASIC9.17□□□□□ -0.94
Hoxa3P02831 Slc26a11-201ENSMUST00000050880 2695 ntAPPRIS P1 TSL 1 (best) BASIC9.17□□□□□ -0.94
Hoxa3P02831 Ccdc15-206ENSMUST00000217238 1747 ntAPPRIS ALT2 TSL 1 (best) BASIC9.17□□□□□ -0.94
Hoxa3P02831 Npl-201ENSMUST00000041874 1735 ntAPPRIS P1 TSL 1 (best) BASIC9.17□□□□□ -0.94
Hoxa3P02831 Pla2g4c-201ENSMUST00000043612 3382 ntAPPRIS P3 TSL 1 (best) BASIC9.16□□□□□ -0.94
Hoxa3P02831 Csnk1a1-204ENSMUST00000165123 4083 ntAPPRIS P2 TSL 1 (best) BASIC9.16□□□□□ -0.94
Hoxa3P02831 Ak8-201ENSMUST00000074156 1567 ntAPPRIS P1 TSL 1 (best) BASIC9.16□□□□□ -0.94
Hoxa3P02831 Rnf41-201ENSMUST00000096386 3144 ntAPPRIS P1 TSL 1 (best) BASIC9.16□□□□□ -0.94
Hoxa3P02831 CT010480.4-201ENSMUST00000224654 2283 ntBASIC9.16□□□□□ -0.94
Hoxa3P02831 Spock2-203ENSMUST00000165024 3699 ntAPPRIS ALT2 TSL 5 BASIC9.16□□□□□ -0.94
Hoxa3P02831 Corin-207ENSMUST00000177290 2943 ntAPPRIS ALT2 TSL 5 BASIC9.16□□□□□ -0.94
Hoxa3P02831 Tnk2-207ENSMUST00000115126 4358 ntTSL 5 BASIC9.16□□□□□ -0.94
Hoxa3P02831 Gm44056-201ENSMUST00000204623 1427 ntBASIC9.16□□□□□ -0.94
Hoxa3P02831 Dntt-201ENSMUST00000051806 2128 ntTSL 1 (best) BASIC9.16□□□□□ -0.94
Hoxa3P02831 Fam234b-201ENSMUST00000111915 4221 ntAPPRIS P1 TSL 1 (best) BASIC9.16□□□□□ -0.94
Hoxa3P02831 Cmya5-201ENSMUST00000062122 11850 ntAPPRIS P1 TSL 1 (best) BASIC9.16□□□□□ -0.94
Hoxa3P02831 Klhdc10-206ENSMUST00000144272 1387 ntTSL 1 (best) BASIC9.16□□□□□ -0.94
Hoxa3P02831 Atl2-202ENSMUST00000112437 3371 ntTSL 1 (best) BASIC9.16□□□□□ -0.94
Hoxa3P02831 AC154537.1-201ENSMUST00000226101 1304 ntBASIC9.16□□□□□ -0.94
Hoxa3P02831 Bicd2-202ENSMUST00000110084 4488 ntAPPRIS ALT2 TSL 1 (best) BASIC9.16□□□□□ -0.94
Hoxa3P02831 Ighv1-81-201ENSMUST00000103548 351 ntAPPRIS P1 BASIC9.16□□□□□ -0.94
Hoxa3P02831 Gm25562-201ENSMUST00000104608 133 ntBASIC9.16□□□□□ -0.94
Hoxa3P02831 Il1rn-202ENSMUST00000114485 728 ntTSL 1 (best) BASIC9.16□□□□□ -0.94
Hoxa3P02831 Gm14398-201ENSMUST00000117287 1073 ntBASIC9.16□□□□□ -0.94
Hoxa3P02831 Spaca9-202ENSMUST00000124840 699 ntAPPRIS P1 TSL 1 (best) BASIC9.16□□□□□ -0.94
Hoxa3P02831 Srrm3os-201ENSMUST00000131896 1271 ntTSL 1 (best) BASIC9.16□□□□□ -0.94
Hoxa3P02831 Gm15409-201ENSMUST00000135240 520 ntTSL 2 BASIC9.16□□□□□ -0.94
Hoxa3P02831 Hmgn2-208ENSMUST00000136327 772 ntTSL 2 BASIC9.16□□□□□ -0.94
Hoxa3P02831 Gm28038-201ENSMUST00000143119 378 ntAPPRIS P1 TSL 5 BASIC9.16□□□□□ -0.94
Hoxa3P02831 Asgr1-205ENSMUST00000146411 1188 ntAPPRIS P3 TSL 1 (best) BASIC9.16□□□□□ -0.94
Hoxa3P02831 Gm22846-201ENSMUST00000157706 270 ntBASIC9.16□□□□□ -0.94
Hoxa3P02831 Bhmt-ps1-201ENSMUST00000178743 1224 ntBASIC9.16□□□□□ -0.94
Hoxa3P02831 Gm44696-201ENSMUST00000181943 1229 ntTSL 1 (best) BASIC9.16□□□□□ -0.94
Hoxa3P02831 Gm7593-201ENSMUST00000187246 644 ntBASIC9.16□□□□□ -0.94
Hoxa3P02831 Gm37365-201ENSMUST00000193109 409 ntBASIC9.16□□□□□ -0.94
Hoxa3P02831 Snhg8-201ENSMUST00000196466 448 ntTSL 1 (best) BASIC9.16□□□□□ -0.94
Hoxa3P02831 Gm43692-201ENSMUST00000198236 1062 ntBASIC9.16□□□□□ -0.94
Hoxa3P02831 Gm42867-201ENSMUST00000202995 469 ntBASIC9.16□□□□□ -0.94
Hoxa3P02831 Gm44814-201ENSMUST00000207018 434 ntBASIC9.16□□□□□ -0.94
Hoxa3P02831 Tex29-205ENSMUST00000209692 884 ntAPPRIS ALT2 TSL 5 BASIC9.16□□□□□ -0.94
Hoxa3P02831 Hrc-202ENSMUST00000211327 607 ntTSL 5 BASIC9.16□□□□□ -0.94
Hoxa3P02831 Gm45572-201ENSMUST00000211774 750 ntTSL 5 BASIC9.16□□□□□ -0.94
Hoxa3P02831 AC154572.1-201ENSMUST00000226098 1204 ntBASIC9.16□□□□□ -0.94
Hoxa3P02831 Gm4604-201ENSMUST00000025040 390 ntBASIC9.16□□□□□ -0.94
Hoxa3P02831 Nme6-201ENSMUST00000035053 1074 ntAPPRIS P1 TSL 1 (best) BASIC9.16□□□□□ -0.94
Hoxa3P02831 Naca-201ENSMUST00000073868 885 ntAPPRIS P1 TSL 1 (best) BASIC9.16□□□□□ -0.94
Hoxa3P02831 Plin2-201ENSMUST00000000466 1888 ntAPPRIS P1 TSL 1 (best) BASIC9.16□□□□□ -0.94
Hoxa3P02831 AC155245.1-201ENSMUST00000222266 1804 ntBASIC9.16□□□□□ -0.94
Hoxa3P02831 Tti2-204ENSMUST00000210129 4159 ntAPPRIS ALT2 TSL 1 (best) BASIC9.16□□□□□ -0.94
Hoxa3P02831 Nxpe5-204ENSMUST00000161047 2379 ntAPPRIS ALT2 TSL 1 (best) BASIC9.16□□□□□ -0.94
Hoxa3P02831 Serpina1b-202ENSMUST00000164454 1760 ntAPPRIS P1 TSL 1 (best) BASIC9.16□□□□□ -0.94
Hoxa3P02831 Nr5a2-205ENSMUST00000192929 1756 ntTSL 1 (best) BASIC9.16□□□□□ -0.94
Hoxa3P02831 Dlgap1-214ENSMUST00000155016 4712 ntAPPRIS P3 TSL 1 (best) BASIC9.16□□□□□ -0.94
Hoxa3P02831 Trpv6-201ENSMUST00000031902 2923 ntAPPRIS ALT2 TSL 1 (best) BASIC9.16□□□□□ -0.94
Hoxa3P02831 Pcgf2-206ENSMUST00000169807 2347 ntAPPRIS P1 TSL 1 (best) BASIC9.16□□□□□ -0.94
Hoxa3P02831 Zfp366-201ENSMUST00000056558 6382 ntAPPRIS P1 TSL 1 (best) BASIC9.16□□□□□ -0.94
Hoxa3P02831 Ltbp1-203ENSMUST00000112516 5140 ntAPPRIS P3 TSL 5 BASIC9.16□□□□□ -0.94
Hoxa3P02831 Dclre1b-203ENSMUST00000106832 2299 ntTSL 1 (best) BASIC9.16□□□□□ -0.94
Hoxa3P02831 Apol7a-203ENSMUST00000175919 2263 ntAPPRIS P1 TSL 1 (best) BASIC9.16□□□□□ -0.94
Hoxa3P02831 Mphosph10-201ENSMUST00000032735 2248 ntAPPRIS P1 TSL 1 (best) BASIC9.16□□□□□ -0.94
Hoxa3P02831 Pde6b-201ENSMUST00000031456 2799 ntAPPRIS P1 TSL 1 (best) BASIC9.16□□□□□ -0.94
Hoxa3P02831 Gm44153-201ENSMUST00000204162 1580 ntBASIC9.16□□□□□ -0.94
Hoxa3P02831 Rsl24d1-201ENSMUST00000034738 1543 ntAPPRIS P1 TSL 1 (best) BASIC9.15□□□□□ -0.94
Hoxa3P02831 Ift88os-201ENSMUST00000149702 2016 ntTSL 1 (best) BASIC9.15□□□□□ -0.94
Hoxa3P02831 Amigo3-201ENSMUST00000085060 2543 ntAPPRIS P1 BASIC9.15□□□□□ -0.94
Hoxa3P02831 Chd7-206ENSMUST00000170391 3462 ntTSL 5 BASIC9.15□□□□□ -0.94
Hoxa3P02831 Gm6268-201ENSMUST00000115253 1453 ntAPPRIS P1 TSL 5 BASIC9.15□□□□□ -0.94
Hoxa3P02831 Mterf3-201ENSMUST00000021991 1479 ntAPPRIS P1 TSL 1 (best) BASIC9.15□□□□□ -0.94
Hoxa3P02831 Sez6l-202ENSMUST00000079491 5857 ntAPPRIS ALT2 TSL 1 (best) BASIC9.15□□□□□ -0.94
Hoxa3P02831 Atp4a-204ENSMUST00000170371 3447 ntTSL 1 (best) BASIC9.15□□□□□ -0.94
Hoxa3P02831 Ubxn6-201ENSMUST00000019722 2949 ntAPPRIS P1 TSL 1 (best) BASIC9.15□□□□□ -0.94
Hoxa3P02831 Gm40617-201ENSMUST00000218840 2420 ntTSL 1 (best) BASIC9.15□□□□□ -0.94
Hoxa3P02831 Pak7-201ENSMUST00000035264 4848 ntAPPRIS P1 TSL 1 (best) BASIC9.15□□□□□ -0.94
Hoxa3P02831 Syne3-202ENSMUST00000095439 3357 ntAPPRIS P4 TSL 1 (best) BASIC9.15□□□□□ -0.94
Hoxa3P02831 Fbxo15-201ENSMUST00000037718 1437 ntAPPRIS P2 TSL 1 (best) BASIC9.15□□□□□ -0.94
Hoxa3P02831 Scaf1-201ENSMUST00000085383 4293 ntAPPRIS P1 TSL 1 (best) BASIC9.15□□□□□ -0.94
Hoxa3P02831 Pdp2-201ENSMUST00000059588 5692 ntAPPRIS P1 TSL 1 (best) BASIC9.15□□□□□ -0.94
Hoxa3P02831 Slc6a12-205ENSMUST00000166457 1891 ntAPPRIS ALT2 TSL 1 (best) BASIC9.15□□□□□ -0.94
Hoxa3P02831 Pigb-206ENSMUST00000184035 3221 ntAPPRIS P1 TSL 1 (best) BASIC9.15□□□□□ -0.94
Hoxa3P02831 Rasal1-201ENSMUST00000031606 3212 ntAPPRIS P1 TSL 1 (best) BASIC9.15□□□□□ -0.94
Hoxa3P02831 Gm5822-201ENSMUST00000161562 1378 ntBASIC9.15□□□□□ -0.94
Hoxa3P02831 Otog-201ENSMUST00000164538 10043 ntAPPRIS P1 TSL 5 BASIC9.15□□□□□ -0.94
Hoxa3P02831 Slc23a2-201ENSMUST00000028815 6364 ntAPPRIS P1 TSL 1 (best) BASIC9.15□□□□□ -0.94
Hoxa3P02831 Bahcc1-203ENSMUST00000122148 10712 ntAPPRIS ALT2 TSL 1 (best) BASIC9.15□□□□□ -0.94
Hoxa3P02831 Pck1-201ENSMUST00000029017 2661 ntAPPRIS P1 TSL 1 (best) BASIC9.15□□□□□ -0.94
Retrieved 100 of 76,532 protein–RNA pairs in 40.8 ms