Protein–RNA interactions for Protein: Q99JW4

Lims1, LIM and senescent cell antigen-like-containing domain protein 1, mousemouse

Predictions only

Length 325 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Lims1Q99JW4 Arhgap6-204ENSMUST00000112129 2487 ntTSL 1 (best) BASIC9.95□□□□□ -0.82
Lims1Q99JW4 Itpr3-201ENSMUST00000049308 8990 ntAPPRIS P1 TSL 1 (best) BASIC9.95□□□□□ -0.82
Lims1Q99JW4 Lasp1-201ENSMUST00000043843 3540 ntAPPRIS P1 TSL 1 (best) BASIC9.95□□□□□ -0.82
Lims1Q99JW4 Fsd2-201ENSMUST00000042318 3985 ntAPPRIS P1 TSL 2 BASIC9.95□□□□□ -0.82
Lims1Q99JW4 4632415L05Rik-202ENSMUST00000198527 4087 ntBASIC9.95□□□□□ -0.82
Lims1Q99JW4 Cbfa2t2-204ENSMUST00000109725 6080 ntAPPRIS ALT1 TSL 1 (best) BASIC9.95□□□□□ -0.82
Lims1Q99JW4 Setd5-201ENSMUST00000042889 6755 ntAPPRIS P1 TSL 1 (best) BASIC9.94□□□□□ -0.82
Lims1Q99JW4 Dcaf8-201ENSMUST00000074144 4656 ntAPPRIS P1 TSL 1 (best) BASIC9.94□□□□□ -0.82
Lims1Q99JW4 Lima1-201ENSMUST00000073691 4215 ntAPPRIS ALT2 TSL 1 (best) BASIC9.94□□□□□ -0.82
Lims1Q99JW4 Stau2-202ENSMUST00000054668 2907 ntAPPRIS P1 TSL 5 BASIC9.94□□□□□ -0.82
Lims1Q99JW4 AI606181-201ENSMUST00000099454 2796 ntAPPRIS P1 BASIC9.94□□□□□ -0.82
Lims1Q99JW4 Gm38025-201ENSMUST00000193926 2308 ntTSL 1 (best) BASIC9.94□□□□□ -0.82
Lims1Q99JW4 Bco1-201ENSMUST00000034308 2338 ntAPPRIS P3 TSL 1 (best) BASIC9.94□□□□□ -0.82
Lims1Q99JW4 Ly9-203ENSMUST00000111277 2155 ntAPPRIS ALT2 TSL 1 (best) BASIC9.94□□□□□ -0.82
Lims1Q99JW4 Tctn1-201ENSMUST00000111738 5717 ntAPPRIS P1 TSL 1 (best) BASIC9.94□□□□□ -0.82
Lims1Q99JW4 Cfap53-201ENSMUST00000114895 1888 ntAPPRIS P1 TSL 1 (best) BASIC9.94□□□□□ -0.82
Lims1Q99JW4 Pmp22-201ENSMUST00000018361 1800 ntAPPRIS P1 TSL 1 (best) BASIC9.94□□□□□ -0.82
Lims1Q99JW4 Arhgef28-201ENSMUST00000109426 5387 ntAPPRIS P1 TSL 1 (best) BASIC9.94□□□□□ -0.82
Lims1Q99JW4 AC164161.2-201ENSMUST00000217446 1730 ntTSL 5 BASIC9.94□□□□□ -0.82
Lims1Q99JW4 Als2cl-203ENSMUST00000130386 5056 ntAPPRIS P1 TSL 1 (best) BASIC9.94□□□□□ -0.82
Lims1Q99JW4 Ncmap-203ENSMUST00000105858 1616 ntAPPRIS P1 TSL 1 (best) BASIC9.94□□□□□ -0.82
Lims1Q99JW4 Fcrl1-202ENSMUST00000163661 1649 ntAPPRIS ALT2 TSL 1 (best) BASIC9.94□□□□□ -0.82
Lims1Q99JW4 Gm45397-201ENSMUST00000209816 1600 ntTSL 1 (best) BASIC9.94□□□□□ -0.82
Lims1Q99JW4 Gm4900-201ENSMUST00000222046 1628 ntBASIC9.94□□□□□ -0.82
Lims1Q99JW4 Zfp830-201ENSMUST00000056677 1591 ntAPPRIS P1 BASIC9.94□□□□□ -0.82
Lims1Q99JW4 Zfp869-201ENSMUST00000080987 1590 ntAPPRIS P1 TSL 5 BASIC9.94□□□□□ -0.82
Lims1Q99JW4 Col20a1-201ENSMUST00000108856 4489 ntAPPRIS ALT2 TSL 5 BASIC9.94□□□□□ -0.82
Lims1Q99JW4 Celf1-205ENSMUST00000111449 4441 ntAPPRIS ALT1 TSL 1 (best) BASIC9.94□□□□□ -0.82
Lims1Q99JW4 Pnpla6-201ENSMUST00000004681 4438 ntAPPRIS P1 TSL 1 (best) BASIC9.94□□□□□ -0.82
Lims1Q99JW4 Gpr146-203ENSMUST00000100514 4264 ntAPPRIS P1 TSL 1 (best) BASIC9.94□□□□□ -0.82
Lims1Q99JW4 Scaf1-201ENSMUST00000085383 4293 ntAPPRIS P1 TSL 1 (best) BASIC9.94□□□□□ -0.82
Lims1Q99JW4 Gm21998-201ENSMUST00000117552 1308 ntBASIC9.94□□□□□ -0.82
Lims1Q99JW4 Gm6641-201ENSMUST00000196100 1315 ntBASIC9.94□□□□□ -0.82
Lims1Q99JW4 Catsper3-201ENSMUST00000021961 1330 ntAPPRIS ALT2 TSL 1 (best) BASIC9.94□□□□□ -0.82
Lims1Q99JW4 Ets2-201ENSMUST00000023612 3890 ntAPPRIS P1 TSL 1 (best) BASIC9.94□□□□□ -0.82
Lims1Q99JW4 Trav13-1-201ENSMUST00000103651 331 ntAPPRIS P1 BASIC9.94□□□□□ -0.82
Lims1Q99JW4 Ccl27a-203ENSMUST00000108033 428 ntAPPRIS ALT2 TSL 1 (best) BASIC9.94□□□□□ -0.82
Lims1Q99JW4 Gm13045-201ENSMUST00000119019 712 ntBASIC9.94□□□□□ -0.82
Lims1Q99JW4 Gm13010-201ENSMUST00000140495 828 ntTSL 5 BASIC9.94□□□□□ -0.82
Lims1Q99JW4 Platr20-202ENSMUST00000143209 937 ntTSL 1 (best) BASIC9.94□□□□□ -0.82
Lims1Q99JW4 Gm25661-201ENSMUST00000157704 296 ntBASIC9.94□□□□□ -0.82
Lims1Q99JW4 4930471C04Rik-201ENSMUST00000166038 865 ntTSL 1 (best) BASIC9.94□□□□□ -0.82
Lims1Q99JW4 Snord55-201ENSMUST00000174939 79 ntBASIC9.94□□□□□ -0.82
Lims1Q99JW4 Gm20618-202ENSMUST00000177482 1227 ntTSL 3 BASIC9.94□□□□□ -0.82
Lims1Q99JW4 Mir8115-201ENSMUST00000184992 119 ntBASIC9.94□□□□□ -0.82
Lims1Q99JW4 Mir7032-201ENSMUST00000185154 79 ntBASIC9.94□□□□□ -0.82
Lims1Q99JW4 Scgb2b27-203ENSMUST00000185399 702 ntAPPRIS ALT2 TSL 2 BASIC9.94□□□□□ -0.82
Lims1Q99JW4 Creb1-209ENSMUST00000190348 1260 ntTSL 1 (best) BASIC9.94□□□□□ -0.82
Lims1Q99JW4 Fxyd1-214ENSMUST00000206328 545 ntAPPRIS P1 TSL 3 BASIC9.94□□□□□ -0.82
Lims1Q99JW4 Pgpep1l-202ENSMUST00000207874 677 ntAPPRIS P1 TSL 5 BASIC9.94□□□□□ -0.82
Lims1Q99JW4 Gm44753-202ENSMUST00000208297 562 ntTSL 5 BASIC9.94□□□□□ -0.82
Lims1Q99JW4 Gm45310-201ENSMUST00000210436 275 ntBASIC9.94□□□□□ -0.82
Lims1Q99JW4 AC116680.1-201ENSMUST00000222804 613 ntTSL 3 BASIC9.94□□□□□ -0.82
Lims1Q99JW4 CT010506.1-201ENSMUST00000223673 349 ntBASIC9.94□□□□□ -0.82
Lims1Q99JW4 CT025679.1-201ENSMUST00000227106 449 ntBASIC9.94□□□□□ -0.82
Lims1Q99JW4 AC154276.3-201ENSMUST00000227643 998 ntBASIC9.94□□□□□ -0.82
Lims1Q99JW4 Pf4-201ENSMUST00000031320 588 ntAPPRIS P1 TSL 1 (best) BASIC9.94□□□□□ -0.82
Lims1Q99JW4 Tas2r126-201ENSMUST00000059534 930 ntAPPRIS P1 BASIC9.94□□□□□ -0.82
Lims1Q99JW4 Mill2-201ENSMUST00000072386 1121 ntAPPRIS P4 TSL 1 (best) BASIC9.94□□□□□ -0.82
Lims1Q99JW4 Aamdc-202ENSMUST00000072725 776 ntTSL 1 (best) BASIC9.94□□□□□ -0.82
Lims1Q99JW4 Clec4b1-202ENSMUST00000078559 748 ntAPPRIS ALT2 TSL 1 (best) BASIC9.94□□□□□ -0.82
Lims1Q99JW4 5430434F05Rik-201ENSMUST00000206080 3553 ntBASIC9.94□□□□□ -0.82
Lims1Q99JW4 Mak-202ENSMUST00000070193 2937 ntTSL 1 (best) BASIC9.94□□□□□ -0.82
Lims1Q99JW4 Zc3h12a-201ENSMUST00000036188 2755 ntAPPRIS P1 TSL 1 (best) BASIC9.94□□□□□ -0.82
Lims1Q99JW4 Aoc1-201ENSMUST00000031835 2675 ntAPPRIS P1 TSL 1 (best) BASIC9.94□□□□□ -0.82
Lims1Q99JW4 9330182L06Rik-204ENSMUST00000134991 4115 ntAPPRIS ALT2 TSL 1 (best) BASIC9.94□□□□□ -0.82
Lims1Q99JW4 Armt1-201ENSMUST00000095893 2429 ntAPPRIS P1 TSL 1 (best) BASIC9.94□□□□□ -0.82
Lims1Q99JW4 Dnmbp-206ENSMUST00000212592 3901 ntTSL 1 (best) BASIC9.94□□□□□ -0.82
Lims1Q99JW4 Armcx2-202ENSMUST00000113193 3666 ntAPPRIS P1 TSL 1 (best) BASIC9.94□□□□□ -0.82
Lims1Q99JW4 Ilf3-202ENSMUST00000115414 3606 ntAPPRIS ALT2 TSL 1 (best) BASIC9.94□□□□□ -0.82
Lims1Q99JW4 Gm20758-201ENSMUST00000220339 2171 ntTSL 1 (best) BASIC9.94□□□□□ -0.82
Lims1Q99JW4 Sncaip-201ENSMUST00000025413 3632 ntAPPRIS ALT2 TSL 1 (best) BASIC9.94□□□□□ -0.82
Lims1Q99JW4 Gm12367-202ENSMUST00000146909 2105 ntTSL 1 (best) BASIC9.94□□□□□ -0.82
Lims1Q99JW4 Tcn2-205ENSMUST00000109991 1943 ntAPPRIS P1 TSL 5 BASIC9.94□□□□□ -0.82
Lims1Q99JW4 Plrg1-204ENSMUST00000150268 1851 ntAPPRIS P1 TSL 1 (best) BASIC9.93□□□□□ -0.82
Lims1Q99JW4 Sel1l-201ENSMUST00000021347 6300 ntAPPRIS P1 TSL 1 (best) BASIC9.93□□□□□ -0.82
Lims1Q99JW4 Zfp658-201ENSMUST00000005597 2664 ntAPPRIS P1 TSL 1 (best) BASIC9.93□□□□□ -0.82
Lims1Q99JW4 Gm498-202ENSMUST00000152910 1507 ntAPPRIS P1 TSL 5 BASIC9.93□□□□□ -0.82
Lims1Q99JW4 Hspa2-201ENSMUST00000080449 2524 ntAPPRIS P1 TSL 1 (best) BASIC9.93□□□□□ -0.82
Lims1Q99JW4 Trpm1-217ENSMUST00000206263 5493 ntAPPRIS ALT2 TSL 5 BASIC9.93□□□□□ -0.82
Lims1Q99JW4 Papln-202ENSMUST00000121733 4373 ntAPPRIS ALT2 TSL 1 (best) BASIC9.93□□□□□ -0.82
Lims1Q99JW4 Spata48-201ENSMUST00000020410 1430 ntAPPRIS ALT2 TSL 5 BASIC9.93□□□□□ -0.82
Lims1Q99JW4 Gpm6b-207ENSMUST00000112229 3203 ntAPPRIS ALT1 TSL 1 (best) BASIC9.93□□□□□ -0.82
Lims1Q99JW4 Hoxa1-201ENSMUST00000000964 2251 ntAPPRIS P1 TSL 1 (best) BASIC9.93□□□□□ -0.82
Lims1Q99JW4 Dlec1-206ENSMUST00000140326 5815 ntAPPRIS ALT2 TSL 5 BASIC9.93□□□□□ -0.82
Lims1Q99JW4 Gm17518-201ENSMUST00000181232 1346 ntTSL 1 (best) BASIC9.93□□□□□ -0.82
Lims1Q99JW4 Elmod3-202ENSMUST00000114069 2164 ntAPPRIS P2 TSL 1 (best) BASIC9.93□□□□□ -0.82
Lims1Q99JW4 Ighv8-11-201ENSMUST00000103536 358 ntAPPRIS P1 BASIC9.93□□□□□ -0.82
Lims1Q99JW4 Gm12165-201ENSMUST00000117047 342 ntBASIC9.93□□□□□ -0.82
Lims1Q99JW4 Gm11628-201ENSMUST00000117568 171 ntBASIC9.93□□□□□ -0.82
Lims1Q99JW4 Gm11411-201ENSMUST00000117951 719 ntBASIC9.93□□□□□ -0.82
Lims1Q99JW4 Gm15131-201ENSMUST00000119124 595 ntBASIC9.93□□□□□ -0.82
Lims1Q99JW4 Gm11956-201ENSMUST00000119525 512 ntBASIC9.93□□□□□ -0.82
Lims1Q99JW4 Gm14665-201ENSMUST00000122294 557 ntBASIC9.93□□□□□ -0.82
Lims1Q99JW4 Gm11831-201ENSMUST00000141538 629 ntTSL 3 BASIC9.93□□□□□ -0.82
Lims1Q99JW4 Gm11728-201ENSMUST00000150628 660 ntTSL 1 (best) BASIC9.93□□□□□ -0.82
Lims1Q99JW4 Smim5-203ENSMUST00000152171 1113 ntAPPRIS P1 TSL 1 (best) BASIC9.93□□□□□ -0.82
Lims1Q99JW4 Gm27953-201ENSMUST00000185171 143 ntBASIC9.93□□□□□ -0.82
Lims1Q99JW4 Gm28375-201ENSMUST00000185304 430 ntTSL 3 BASIC9.93□□□□□ -0.82
Lims1Q99JW4 Gm37905-201ENSMUST00000195310 341 ntBASIC9.93□□□□□ -0.82
Retrieved 100 of 76,532 protein–RNA pairs in 55 ms