Protein–RNA interactions for Protein: Q3U962

Col5a2, Collagen alpha-2(V) chain, mousemouse

Predictions only

Length 1,497 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Col5a2Q3U962 Gm37542-201ENSMUST00000192563 2832 ntBASIC12.81□□□□□ -0.36
Col5a2Q3U962 Gm45776-201ENSMUST00000212366 1522 ntBASIC12.81□□□□□ -0.36
Col5a2Q3U962 Ccr6-202ENSMUST00000164411 1553 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
Col5a2Q3U962 C2-201ENSMUST00000025230 2641 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
Col5a2Q3U962 Rubcn-203ENSMUST00000115105 5255 ntAPPRIS ALT2 TSL 5 BASIC12.81□□□□□ -0.36
Col5a2Q3U962 Dcun1d2-206ENSMUST00000203604 2112 ntTSL 1 (best) BASIC12.81□□□□□ -0.36
Col5a2Q3U962 C530044C16Rik-201ENSMUST00000204275 1624 ntTSL 1 (best) BASIC12.8□□□□□ -0.36
Col5a2Q3U962 Nlrc3-203ENSMUST00000177551 5403 ntAPPRIS P1 TSL 2 BASIC12.8□□□□□ -0.36
Col5a2Q3U962 Metap2-208ENSMUST00000181091 1876 ntTSL 1 (best) BASIC12.8□□□□□ -0.36
Col5a2Q3U962 Gstm6-204ENSMUST00000106684 1179 ntTSL 1 (best) BASIC12.8□□□□□ -0.36
Col5a2Q3U962 Olfr1060-ps1-201ENSMUST00000118335 943 ntBASIC12.8□□□□□ -0.36
Col5a2Q3U962 Gm14370-201ENSMUST00000122460 868 ntBASIC12.8□□□□□ -0.36
Col5a2Q3U962 n-R5s154-201ENSMUST00000122513 108 ntBASIC12.8□□□□□ -0.36
Col5a2Q3U962 Gm15273-201ENSMUST00000142302 868 ntBASIC12.8□□□□□ -0.36
Col5a2Q3U962 Platr20-202ENSMUST00000143209 937 ntTSL 1 (best) BASIC12.8□□□□□ -0.36
Col5a2Q3U962 Gm7023-201ENSMUST00000147295 868 ntBASIC12.8□□□□□ -0.36
Col5a2Q3U962 Gm14357-201ENSMUST00000178352 868 ntBASIC12.8□□□□□ -0.36
Col5a2Q3U962 Gm14361-201ENSMUST00000178547 868 ntBASIC12.8□□□□□ -0.36
Col5a2Q3U962 Gm14348-201ENSMUST00000179183 868 ntBASIC12.8□□□□□ -0.36
Col5a2Q3U962 Gm28916-201ENSMUST00000186988 699 ntBASIC12.8□□□□□ -0.36
Col5a2Q3U962 Gm28746-201ENSMUST00000187453 380 ntBASIC12.8□□□□□ -0.36
Col5a2Q3U962 Crip1-205ENSMUST00000199089 509 ntTSL 3 BASIC12.8□□□□□ -0.36
Col5a2Q3U962 Gm43122-202ENSMUST00000202259 526 ntTSL 2 BASIC12.8□□□□□ -0.36
Col5a2Q3U962 Tmem238l-203ENSMUST00000211300 930 ntAPPRIS P1 TSL 3 BASIC12.8□□□□□ -0.36
Col5a2Q3U962 AC113291.2-201ENSMUST00000215490 1205 ntTSL 1 (best) BASIC12.8□□□□□ -0.36
Col5a2Q3U962 2310039L15Rik-203ENSMUST00000220058 727 ntTSL 5 BASIC12.8□□□□□ -0.36
Col5a2Q3U962 Phf5a-201ENSMUST00000023117 864 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
Col5a2Q3U962 Cacnb2-203ENSMUST00000114723 3945 ntTSL 1 (best) BASIC12.8□□□□□ -0.36
Col5a2Q3U962 Sqle-202ENSMUST00000100640 2636 ntTSL 1 (best) BASIC12.8□□□□□ -0.36
Col5a2Q3U962 Tcf12-201ENSMUST00000034755 4621 ntAPPRIS ALT1 TSL 5 BASIC12.8□□□□□ -0.36
Col5a2Q3U962 Nin-204ENSMUST00000169074 6636 ntAPPRIS ALT2 TSL 1 (best) BASIC12.8□□□□□ -0.36
Col5a2Q3U962 Vcp-201ENSMUST00000030164 3316 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
Col5a2Q3U962 Map6-201ENSMUST00000068973 3430 ntAPPRIS P3 TSL 1 (best) BASIC12.8□□□□□ -0.36
Col5a2Q3U962 Rufy2-202ENSMUST00000119567 4130 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
Col5a2Q3U962 Cnot8-202ENSMUST00000108843 2099 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
Col5a2Q3U962 Trak1-213ENSMUST00000211439 3533 ntAPPRIS ALT2 TSL 1 (best) BASIC12.8□□□□□ -0.36
Col5a2Q3U962 Xkr5-201ENSMUST00000055503 3176 ntTSL 1 (best) BASIC12.8□□□□□ -0.36
Col5a2Q3U962 Msh6-201ENSMUST00000005503 4254 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
Col5a2Q3U962 Ikzf4-201ENSMUST00000133342 5150 ntAPPRIS P1 TSL 2 BASIC12.8□□□□□ -0.36
Col5a2Q3U962 Ccnk-202ENSMUST00000221167 2789 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
Col5a2Q3U962 Hdac5-203ENSMUST00000107151 4852 ntTSL 5 BASIC12.8□□□□□ -0.36
Col5a2Q3U962 Gm46430-201ENSMUST00000220478 1989 ntTSL 3 BASIC12.8□□□□□ -0.36
Col5a2Q3U962 Tmem135-202ENSMUST00000117852 2986 ntTSL 1 (best) BASIC12.8□□□□□ -0.36
Col5a2Q3U962 Mcm9-204ENSMUST00000219838 4132 ntTSL 5 BASIC12.8□□□□□ -0.36
Col5a2Q3U962 Pacsin1-201ENSMUST00000045896 4190 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
Col5a2Q3U962 Edn1-201ENSMUST00000021796 2139 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
Col5a2Q3U962 Abca3-201ENSMUST00000039013 6476 ntAPPRIS P2 TSL 1 (best) BASIC12.79□□□□□ -0.36
Col5a2Q3U962 Olfr464-205ENSMUST00000217112 2232 ntAPPRIS P1 TSL 5 BASIC12.79□□□□□ -0.36
Col5a2Q3U962 AC153380.1-201ENSMUST00000214959 2364 ntBASIC12.79□□□□□ -0.36
Col5a2Q3U962 Rab29-202ENSMUST00000112386 1202 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
Col5a2Q3U962 Sh2d1a-203ENSMUST00000115070 782 ntTSL 1 (best) BASIC12.79□□□□□ -0.36
Col5a2Q3U962 Lypla1-202ENSMUST00000115529 930 ntTSL 2 BASIC12.79□□□□□ -0.36
Col5a2Q3U962 Gm16518-201ENSMUST00000117960 508 ntBASIC12.79□□□□□ -0.36
Col5a2Q3U962 Gm13781-201ENSMUST00000124153 492 ntTSL 2 BASIC12.79□□□□□ -0.36
Col5a2Q3U962 Gm11608-202ENSMUST00000153049 877 ntTSL 3 BASIC12.79□□□□□ -0.36
Col5a2Q3U962 Gm23521-201ENSMUST00000177845 110 ntBASIC12.79□□□□□ -0.36
Col5a2Q3U962 Gm26698-201ENSMUST00000181290 971 ntTSL 1 (best) BASIC12.79□□□□□ -0.36
Col5a2Q3U962 Mir8104-201ENSMUST00000185165 101 ntBASIC12.79□□□□□ -0.36
Col5a2Q3U962 Rps27-202ENSMUST00000195998 458 ntTSL 5 BASIC12.79□□□□□ -0.36
Col5a2Q3U962 Gimd1-205ENSMUST00000212852 1234 ntTSL 5 BASIC12.79□□□□□ -0.36
Col5a2Q3U962 AC156633.1-201ENSMUST00000215971 614 ntTSL 2 BASIC12.79□□□□□ -0.36
Col5a2Q3U962 Fdps-201ENSMUST00000081848 1237 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
Col5a2Q3U962 Epha6-201ENSMUST00000068860 3930 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
Col5a2Q3U962 Zscan10-205ENSMUST00000120967 2609 ntTSL 1 (best) BASIC12.79□□□□□ -0.36
Col5a2Q3U962 Brsk2-216ENSMUST00000174499 4223 ntAPPRIS ALT2 TSL 5 BASIC12.79□□□□□ -0.36
Col5a2Q3U962 Rragd-202ENSMUST00000084747 4295 ntTSL 5 BASIC12.79□□□□□ -0.36
Col5a2Q3U962 Fam78b-202ENSMUST00000126198 2951 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
Col5a2Q3U962 Nrg1-202ENSMUST00000207417 3138 ntAPPRIS ALT2 TSL 5 BASIC12.79□□□□□ -0.36
Col5a2Q3U962 Padi2-201ENSMUST00000030765 4774 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
Col5a2Q3U962 Rdh7-201ENSMUST00000047199 1678 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
Col5a2Q3U962 Gng7-203ENSMUST00000117805 3382 ntAPPRIS ALT1 TSL 1 (best) BASIC12.79□□□□□ -0.36
Col5a2Q3U962 Prkar1a-201ENSMUST00000049527 3359 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
Col5a2Q3U962 Eif5-212ENSMUST00000222375 3547 ntAPPRIS P2 TSL 1 (best) BASIC12.79□□□□□ -0.36
Col5a2Q3U962 Sdcbp-204ENSMUST00000108374 1803 ntTSL 1 (best) BASIC12.79□□□□□ -0.36
Col5a2Q3U962 Best1-201ENSMUST00000117346 2080 ntAPPRIS P1 TSL 5 BASIC12.79□□□□□ -0.36
Col5a2Q3U962 H2-T3-201ENSMUST00000025312 2114 ntTSL 1 (best) BASIC12.79□□□□□ -0.36
Col5a2Q3U962 Elf2-213ENSMUST00000195432 2161 ntTSL 1 (best) BASIC12.79□□□□□ -0.36
Col5a2Q3U962 Kctd10-202ENSMUST00000102581 3103 ntAPPRIS P3 TSL 1 (best) BASIC12.79□□□□□ -0.36
Col5a2Q3U962 Ugt1a7c-201ENSMUST00000058237 3231 ntAPPRIS P3 TSL 1 (best) BASIC12.79□□□□□ -0.36
Col5a2Q3U962 Gli2-201ENSMUST00000062483 6637 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
Col5a2Q3U962 Pds5b-201ENSMUST00000016569 7417 ntAPPRIS P3 TSL 1 (best) BASIC12.79□□□□□ -0.36
Col5a2Q3U962 Igkv3-12-201ENSMUST00000103396 359 ntAPPRIS P1 BASIC12.78□□□□□ -0.36
Col5a2Q3U962 Ciz1-202ENSMUST00000113331 2604 ntAPPRIS ALT2 TSL 5 BASIC12.78□□□□□ -0.36
Col5a2Q3U962 Gm6881-201ENSMUST00000121811 833 ntBASIC12.78□□□□□ -0.36
Col5a2Q3U962 Snx29-203ENSMUST00000122168 2096 ntTSL 5 BASIC12.78□□□□□ -0.36
Col5a2Q3U962 Gm13898-201ENSMUST00000141865 610 ntBASIC12.78□□□□□ -0.36
Col5a2Q3U962 Tmem204-202ENSMUST00000153745 902 ntTSL 2 BASIC12.78□□□□□ -0.36
Col5a2Q3U962 Ctss-201ENSMUST00000015667 1355 ntAPPRIS ALT2 TSL 1 (best) BASIC12.78□□□□□ -0.36
Col5a2Q3U962 4933434E20Rik-206ENSMUST00000160640 2510 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
Col5a2Q3U962 Gm16587-201ENSMUST00000161943 863 ntTSL 1 (best) BASIC12.78□□□□□ -0.36
Col5a2Q3U962 Slc37a4-201ENSMUST00000165839 2086 ntAPPRIS P2 TSL 1 (best) BASIC12.78□□□□□ -0.36
Col5a2Q3U962 Gm24180-201ENSMUST00000179961 110 ntBASIC12.78□□□□□ -0.36
Col5a2Q3U962 Tunar-201ENSMUST00000180458 3282 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
Col5a2Q3U962 Gm7672-201ENSMUST00000180915 872 ntBASIC12.78□□□□□ -0.36
Col5a2Q3U962 Gm37264-201ENSMUST00000194916 2192 ntBASIC12.78□□□□□ -0.36
Col5a2Q3U962 Gm30652-201ENSMUST00000199103 430 ntBASIC12.78□□□□□ -0.36
Col5a2Q3U962 Gm44716-201ENSMUST00000209007 710 ntBASIC12.78□□□□□ -0.36
Col5a2Q3U962 AI593442-203ENSMUST00000213937 5674 ntAPPRIS P1 TSL 2 BASIC12.78□□□□□ -0.36
Col5a2Q3U962 Tjp3-205ENSMUST00000219479 2901 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
Col5a2Q3U962 AC154640.1-203ENSMUST00000228316 1618 ntBASIC12.78□□□□□ -0.36
Retrieved 100 of 76,532 protein–RNA pairs in 45.9 ms