Protein–RNA interactions for Protein: Q02789

Cacna1s, Voltage-dependent L-type calcium channel subunit alpha-1S, mousemouse

Predictions only

Length 1,880 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cacna1sQ02789 Smok3c-202ENSMUST00000178402 1515 ntAPPRIS P1 BASIC13.49□□□□□ -0.25
Cacna1sQ02789 Gm42449-201ENSMUST00000200349 2258 ntBASIC13.49□□□□□ -0.25
Cacna1sQ02789 Syvn1-204ENSMUST00000138532 3464 ntAPPRIS P2 TSL 1 (best) BASIC13.49□□□□□ -0.25
Cacna1sQ02789 Rasgrp4-214ENSMUST00000205027 2717 ntTSL 5 BASIC13.49□□□□□ -0.25
Cacna1sQ02789 Rtn4-202ENSMUST00000078830 3615 ntTSL 1 (best) BASIC13.49□□□□□ -0.25
Cacna1sQ02789 Acvr1-203ENSMUST00000112599 2891 ntAPPRIS P1 TSL 1 (best) BASIC13.49□□□□□ -0.25
Cacna1sQ02789 Arg2-201ENSMUST00000021550 1428 ntAPPRIS P1 TSL 1 (best) BASIC13.49□□□□□ -0.25
Cacna1sQ02789 Optc-201ENSMUST00000124051 1885 ntAPPRIS P1 TSL 1 (best) BASIC13.49□□□□□ -0.25
Cacna1sQ02789 Asap1-216ENSMUST00000177083 4415 ntAPPRIS ALT2 TSL 1 (best) BASIC13.49□□□□□ -0.25
Cacna1sQ02789 Zfp334-201ENSMUST00000103084 8205 ntAPPRIS P1 TSL 1 (best) BASIC13.49□□□□□ -0.25
Cacna1sQ02789 Platr6-201ENSMUST00000180731 1818 ntTSL 1 (best) BASIC13.49□□□□□ -0.25
Cacna1sQ02789 4931423N10Rik-201ENSMUST00000028113 1842 ntAPPRIS P1 TSL 1 (best) BASIC13.49□□□□□ -0.25
Cacna1sQ02789 AC164099.2-201ENSMUST00000227795 2005 ntAPPRIS P1 BASIC13.49□□□□□ -0.25
Cacna1sQ02789 Dzip1-202ENSMUST00000047208 4476 ntAPPRIS P1 TSL 5 BASIC13.49□□□□□ -0.25
Cacna1sQ02789 Ptprm-203ENSMUST00000224091 3773 ntBASIC13.49□□□□□ -0.25
Cacna1sQ02789 Gpd2-201ENSMUST00000028167 5620 ntAPPRIS P1 TSL 1 (best) BASIC13.49□□□□□ -0.25
Cacna1sQ02789 Rbm48-201ENSMUST00000042753 2368 ntAPPRIS P2 TSL 1 (best) BASIC13.49□□□□□ -0.25
Cacna1sQ02789 Chrdl1-202ENSMUST00000074660 4096 ntAPPRIS P3 TSL 1 (best) BASIC13.48□□□□□ -0.25
Cacna1sQ02789 Gm12072-201ENSMUST00000118293 715 ntBASIC13.48□□□□□ -0.25
Cacna1sQ02789 Gm14323-201ENSMUST00000122418 627 ntBASIC13.48□□□□□ -0.25
Cacna1sQ02789 Fam162b-201ENSMUST00000020064 646 ntAPPRIS P1 TSL 1 (best) BASIC13.48□□□□□ -0.25
Cacna1sQ02789 Gm3198-201ENSMUST00000208725 1026 ntBASIC13.48□□□□□ -0.25
Cacna1sQ02789 AC113282.4-201ENSMUST00000225273 903 ntAPPRIS P1 BASIC13.48□□□□□ -0.25
Cacna1sQ02789 Clpsl2-201ENSMUST00000025061 442 ntAPPRIS P1 TSL 1 (best) BASIC13.48□□□□□ -0.25
Cacna1sQ02789 Fut10-202ENSMUST00000110527 2327 ntTSL 1 (best) BASIC13.48□□□□□ -0.25
Cacna1sQ02789 Amn1-202ENSMUST00000111535 1457 ntAPPRIS P2 TSL 5 BASIC13.48□□□□□ -0.25
Cacna1sQ02789 Plekha7-203ENSMUST00000181998 5149 ntAPPRIS P2 TSL 1 (best) BASIC13.48□□□□□ -0.25
Cacna1sQ02789 Npr2-201ENSMUST00000030191 3660 ntAPPRIS P1 TSL 1 (best) BASIC13.48□□□□□ -0.25
Cacna1sQ02789 Myh14-204ENSMUST00000207775 6499 ntAPPRIS ALT2 TSL 5 BASIC13.48□□□□□ -0.25
Cacna1sQ02789 Hk1-205ENSMUST00000130422 2916 ntAPPRIS ALT2 TSL 5 BASIC13.48□□□□□ -0.25
Cacna1sQ02789 C5ar1-202ENSMUST00000168818 2540 ntAPPRIS P1 TSL 1 (best) BASIC13.48□□□□□ -0.25
Cacna1sQ02789 9530026P05Rik-204ENSMUST00000204449 1740 ntTSL 1 (best) BASIC13.48□□□□□ -0.25
Cacna1sQ02789 Elf2-206ENSMUST00000163748 2656 ntAPPRIS P3 TSL 1 (best) BASIC13.48□□□□□ -0.25
Cacna1sQ02789 Exoc3l4-209ENSMUST00000222897 2665 ntAPPRIS P1 TSL 1 (best) BASIC13.48□□□□□ -0.25
Cacna1sQ02789 Pik3r6-202ENSMUST00000102613 3225 ntAPPRIS P3 TSL 1 (best) BASIC13.48□□□□□ -0.25
Cacna1sQ02789 Slc16a3-208ENSMUST00000168579 4335 ntAPPRIS P1 TSL 1 (best) BASIC13.48□□□□□ -0.25
Cacna1sQ02789 Lims1-202ENSMUST00000020078 4327 ntAPPRIS P1 TSL 1 (best) BASIC13.48□□□□□ -0.25
Cacna1sQ02789 Ptp4a1-201ENSMUST00000027232 4145 ntAPPRIS P1 TSL 1 (best) BASIC13.48□□□□□ -0.25
Cacna1sQ02789 Arhgap20-204ENSMUST00000130405 3881 ntAPPRIS ALT2 TSL 5 BASIC13.48□□□□□ -0.25
Cacna1sQ02789 Gpcpd1-202ENSMUST00000060955 3686 ntAPPRIS P1 TSL 1 (best) BASIC13.48□□□□□ -0.25
Cacna1sQ02789 Gm12619-201ENSMUST00000117369 385 ntBASIC13.48□□□□□ -0.25
Cacna1sQ02789 Rpl7a-ps13-201ENSMUST00000121692 563 ntBASIC13.48□□□□□ -0.25
Cacna1sQ02789 Gm16365-201ENSMUST00000122987 629 ntTSL 1 (best) BASIC13.48□□□□□ -0.25
Cacna1sQ02789 Gm12316-201ENSMUST00000125853 406 ntTSL 5 BASIC13.48□□□□□ -0.25
Cacna1sQ02789 Ccdc28a-205ENSMUST00000174592 882 ntTSL 5 BASIC13.48□□□□□ -0.25
Cacna1sQ02789 6530411M01Rik-201ENSMUST00000181618 1033 ntTSL 1 (best) BASIC13.48□□□□□ -0.25
Cacna1sQ02789 Gm33024-201ENSMUST00000203143 633 ntTSL 3 BASIC13.48□□□□□ -0.25
Cacna1sQ02789 Cox7a1-202ENSMUST00000208441 485 ntTSL 2 BASIC13.48□□□□□ -0.25
Cacna1sQ02789 Rab38-202ENSMUST00000208478 579 ntTSL 3 BASIC13.48□□□□□ -0.25
Cacna1sQ02789 Galc-201ENSMUST00000021390 3832 ntAPPRIS P1 TSL 1 (best) BASIC13.48□□□□□ -0.25
Cacna1sQ02789 Ryk-ps1-201ENSMUST00000219713 235 ntBASIC13.48□□□□□ -0.25
Cacna1sQ02789 AC170810.2-201ENSMUST00000228384 1232 ntBASIC13.48□□□□□ -0.25
Cacna1sQ02789 Tff3-201ENSMUST00000024827 493 ntAPPRIS P1 TSL 1 (best) BASIC13.48□□□□□ -0.25
Cacna1sQ02789 Krtap9-1-201ENSMUST00000093936 1044 ntAPPRIS P1 BASIC13.48□□□□□ -0.25
Cacna1sQ02789 Mllt10-203ENSMUST00000114671 5063 ntTSL 1 (best) BASIC13.48□□□□□ -0.25
Cacna1sQ02789 Llgl2-212ENSMUST00000177736 3612 ntAPPRIS ALT2 TSL 2 BASIC13.48□□□□□ -0.25
Cacna1sQ02789 Fbxo40-202ENSMUST00000114806 2518 ntAPPRIS P1 TSL 1 (best) BASIC13.48□□□□□ -0.25
Cacna1sQ02789 Fam49b-201ENSMUST00000063838 3797 ntAPPRIS P1 TSL 1 (best) BASIC13.48□□□□□ -0.25
Cacna1sQ02789 Nid1-201ENSMUST00000005532 6091 ntAPPRIS P1 TSL 1 (best) BASIC13.48□□□□□ -0.25
Cacna1sQ02789 Tes-201ENSMUST00000076654 2685 ntTSL 1 (best) BASIC13.48□□□□□ -0.25
Cacna1sQ02789 Smim1-208ENSMUST00000143047 3373 ntAPPRIS P1 TSL 1 (best) BASIC13.48□□□□□ -0.25
Cacna1sQ02789 Tfe3-202ENSMUST00000079542 3163 ntTSL 1 (best) BASIC13.48□□□□□ -0.25
Cacna1sQ02789 Tex2-202ENSMUST00000103070 2645 ntAPPRIS ALT2 TSL 1 (best) BASIC13.48□□□□□ -0.25
Cacna1sQ02789 H2-M10.3-201ENSMUST00000073546 1593 ntAPPRIS P1 TSL 1 (best) BASIC13.48□□□□□ -0.25
Cacna1sQ02789 Ggnbp1-203ENSMUST00000133257 5012 ntAPPRIS P3 TSL 1 (best) BASIC13.48□□□□□ -0.25
Cacna1sQ02789 AC164161.2-201ENSMUST00000217446 1730 ntTSL 5 BASIC13.47□□□□□ -0.25
Cacna1sQ02789 Gm42890-202ENSMUST00000167642 2566 ntTSL 1 (best) BASIC13.47□□□□□ -0.25
Cacna1sQ02789 Scn4b-201ENSMUST00000060125 4982 ntAPPRIS P1 TSL 1 (best) BASIC13.47□□□□□ -0.25
Cacna1sQ02789 Kcnh1-202ENSMUST00000110844 7161 ntAPPRIS ALT2 TSL 1 (best) BASIC13.47□□□□□ -0.25
Cacna1sQ02789 Gm15535-202ENSMUST00000148478 1519 ntTSL 1 (best) BASIC13.47□□□□□ -0.25
Cacna1sQ02789 Sun2-202ENSMUST00000089311 3709 ntAPPRIS P3 TSL 1 (best) BASIC13.47□□□□□ -0.25
Cacna1sQ02789 Uap1l1-201ENSMUST00000102925 3349 ntAPPRIS P1 TSL 1 (best) BASIC13.47□□□□□ -0.25
Cacna1sQ02789 Ifitm7-202ENSMUST00000178021 1823 ntAPPRIS ALT2 BASIC13.47□□□□□ -0.25
Cacna1sQ02789 Bcl11a-201ENSMUST00000000881 3061 ntTSL 1 (best) BASIC13.47□□□□□ -0.25
Cacna1sQ02789 Dnajb1-202ENSMUST00000212300 2854 ntTSL 1 (best) BASIC13.47□□□□□ -0.25
Cacna1sQ02789 Igkv3-9-201ENSMUST00000103398 359 ntAPPRIS P1 BASIC13.47□□□□□ -0.25
Cacna1sQ02789 Gm12570-201ENSMUST00000122047 1030 ntBASIC13.47□□□□□ -0.25
Cacna1sQ02789 Gm11959-201ENSMUST00000148655 723 ntTSL 1 (best) BASIC13.47□□□□□ -0.25
Cacna1sQ02789 Tnni1-208ENSMUST00000154463 749 ntAPPRIS P1 TSL 5 BASIC13.47□□□□□ -0.25
Cacna1sQ02789 Gm27953-201ENSMUST00000185171 143 ntBASIC13.47□□□□□ -0.25
Cacna1sQ02789 Gm37232-201ENSMUST00000194887 367 ntBASIC13.47□□□□□ -0.25
Cacna1sQ02789 Gm37012-201ENSMUST00000194991 1078 ntBASIC13.47□□□□□ -0.25
Cacna1sQ02789 Gm18471-201ENSMUST00000208272 452 ntBASIC13.47□□□□□ -0.25
Cacna1sQ02789 Rnf183-202ENSMUST00000107454 1407 ntAPPRIS P1 TSL 3 BASIC13.47□□□□□ -0.25
Cacna1sQ02789 Pip4k2c-201ENSMUST00000013970 3307 ntAPPRIS P1 TSL 1 (best) BASIC13.47□□□□□ -0.25
Cacna1sQ02789 Sorcs1-206ENSMUST00000209783 3489 ntTSL 1 (best) BASIC13.47□□□□□ -0.25
Cacna1sQ02789 Jak3-202ENSMUST00000110012 3774 ntAPPRIS P1 TSL 5 BASIC13.47□□□□□ -0.25
Cacna1sQ02789 Bckdk-207ENSMUST00000206745 1702 ntTSL 5 BASIC13.47□□□□□ -0.25
Cacna1sQ02789 Ppp4r3b-201ENSMUST00000020755 5125 ntAPPRIS P1 TSL 1 (best) BASIC13.47□□□□□ -0.25
Cacna1sQ02789 Arhgap1-202ENSMUST00000111329 3201 ntAPPRIS P1 TSL 1 (best) BASIC13.47□□□□□ -0.25
Cacna1sQ02789 Aatk-202ENSMUST00000103019 5177 ntAPPRIS P3 TSL 1 (best) BASIC13.47□□□□□ -0.25
Cacna1sQ02789 6030458C11Rik-204ENSMUST00000228177 3156 ntBASIC13.47□□□□□ -0.25
Cacna1sQ02789 Scarb2-201ENSMUST00000031377 4698 ntAPPRIS P1 TSL 1 (best) BASIC13.47□□□□□ -0.25
Cacna1sQ02789 Dhx57-201ENSMUST00000038166 4918 ntAPPRIS P3 TSL 1 (best) BASIC13.47□□□□□ -0.25
Cacna1sQ02789 Gm45902-202ENSMUST00000140494 2390 ntAPPRIS P1 TSL 2 BASIC13.47□□□□□ -0.25
Cacna1sQ02789 Tbc1d9b-201ENSMUST00000093138 4407 ntAPPRIS P3 TSL 1 (best) BASIC13.47□□□□□ -0.25
Cacna1sQ02789 Dab2ip-202ENSMUST00000091010 6455 ntAPPRIS ALT2 TSL 1 (best) BASIC13.47□□□□□ -0.25
Cacna1sQ02789 Rfx1-204ENSMUST00000211046 3677 ntAPPRIS ALT2 TSL 5 BASIC13.47□□□□□ -0.25
Cacna1sQ02789 Ppil2-203ENSMUST00000115721 3088 ntAPPRIS P1 TSL 1 (best) BASIC13.47□□□□□ -0.25
Cacna1sQ02789 Plcl1-201ENSMUST00000042986 6580 ntAPPRIS P1 TSL 1 (best) BASIC13.47□□□□□ -0.25
Retrieved 100 of 76,532 protein–RNA pairs in 55.4 ms